RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 VEZF1Q14119 521 aa11.27□□□□□ -0.6
PCF11-201ENST00000298281 MEF2DQ14814 521 aa11.27□□□□□ -0.6
PCF11-201ENST00000298281 NMNAT1Q9HAN9 279 aaPredicted RBP11.27□□□□□ -0.6
PCF11-201ENST00000298281 A0A0B4J2A0 478 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 GPR39O43194 453 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 RFPL2O75678 378 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 WNT4P56705 351 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 CLDN6P56747 220 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 PNCKQ6P2M8 343 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 OR1J4Q8NGS1 313 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 CPNE7Q9UBL6 633 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 SHPKQ9UHJ6 478 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 BRWD1Q9NSI6 2320 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 IGHEP01854 428 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 FOLR1P15328 257 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 MYF6P23409 242 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 KCNJ8Q15842 424 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 LRRC28Q86X40 367 aaPredicted RBP11.27□□□□□ -0.61
PCF11-201ENST00000298281 TMEM217Q8N7C4 229 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 OR7G3Q8NG95 312 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 OR56B4Q8NH76 319 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 ZNF775Q96BV0 537 aaPredicted RBP11.27□□□□□ -0.61
PCF11-201ENST00000298281 HHIPQ96QV1 700 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 OR52A5Q9H2C5 316 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 EMC7Q9NPA0 242 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 HEYLQ9NQ87 328 aaPredicted RBP11.27□□□□□ -0.61
PCF11-201ENST00000298281 AP5S1Q9NUS5 200 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 ASIC5Q9NY37 505 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 GPR83Q9NYM4 423 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 SLC7A7Q9UM01 511 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 LHX6Q9UPM6 363 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 ZCWPW2A0A1B0GU75 182 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 DBX1A6NMT0 343 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 ZNF785A8K8V0 405 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 OR7C1O76099 320 aaPredicted RBP11.27□□□□□ -0.61
PCF11-201ENST00000298281 WNT11O96014 354 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 EMP2P54851 167 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 GUK1Q16774 197 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 HSD17B13Q7Z5P4 300 aaPredicted RBP11.27□□□□□ -0.61
PCF11-201ENST00000298281 ADGRG3Q86Y34 549 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 NT5C3BQ969T7 300 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 MENTQ9BUN1 341 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 EPHX3Q9H6B9 360 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 OR6C2Q9NZP2 312 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 NOSIPQ9Y314 301 aaKnown RBP11.27□□□□□ -0.61
PCF11-201ENST00000298281 KIR2DS5A0A0G2JLQ3 304 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 A0A0G2JNG1 304 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 KIR2DS3K7RE56 304 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 F10P00742 488 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 BMP1P13497 986 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 KIR2DS5Q14953 304 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 CLVS2Q5SYC1 327 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 PINX1Q96BK5 328 aaKnown RBP11.27□□□□□ -0.61
PCF11-201ENST00000298281 C16orf70Q9BSU1 422 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 DUSP23Q9BVJ7 150 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 SPACA1Q9HBV2 294 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 BTNL2Q9UIR0 455 aa11.27□□□□□ -0.61
PCF11-201ENST00000298281 LRRC3CA6NJW4 275 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 KDM4EB2RXH2 506 aaPredicted RBP11.26□□□□□ -0.61
PCF11-201ENST00000298281 GATCO43716 136 aaKnown RBP11.26□□□□□ -0.61
PCF11-201ENST00000298281 LY86O95711 162 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 PCGF2P35227 344 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 ZNF574Q6ZN55 896 aaPredicted RBP11.26□□□□□ -0.61
PCF11-201ENST00000298281 SLC35F2Q8IXU6 374 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 SLC38A5Q8WUX1 472 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 TVP23CQ96ET8 276 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 HRASLS5Q96KN8 279 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 COQ10AQ96MF6 247 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 UTP23Q9BRU9 249 aaKnown RBP11.26□□□□□ -0.61
PCF11-201ENST00000298281 B3GAT1Q9P2W7 334 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 GPR52Q9Y2T5 361 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 MED1Q15648 1581 aaPredicted RBP11.26□□□□□ -0.61
PCF11-201ENST00000298281 PRAMEF26H0Y7S4 382 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 F7P08709 466 aaPredicted RBP11.26□□□□□ -0.61
PCF11-201ENST00000298281 AKAIN1P0CW23 69 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 SULT1A3P0DMM9 295 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 SULT1A4P0DMN0 295 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 PSMB3P49720 205 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 CARD18P57730 90 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 HACD4Q5VWC8 232 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 PSAPL1Q6NUJ1 521 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 DHRS11Q6UWP2 260 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 LYPD8Q6UX82 237 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 SYT13Q7L8C5 426 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 CISD2Q8N5K1 135 aaKnown RBP11.26□□□□□ -0.61
PCF11-201ENST00000298281 PRRT1Q99946 306 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 NUDT22Q9BRQ3 303 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 SOX7Q9BT81 388 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 NOX3Q9HBY0 568 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 PIAS3Q9Y6X2 628 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 PNPP00491 289 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 ATP1B3P54709 279 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 TMEM244Q5VVB8 128 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 OR8G2PQ6IF36 304 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 ANKRD13BQ86YJ7 626 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 NRMQ8IXM6 262 aa11.26□□□□□ -0.61
PCF11-201ENST00000298281 FAM103A1Q9BTL3 118 aaKnown RBP11.26□□□□□ -0.61
PCF11-201ENST00000298281 USF1P22415 310 aaPredicted RBP11.26□□□□□ -0.61
PCF11-201ENST00000298281 VASPP50552 380 aaPredicted RBP11.26□□□□□ -0.61
PCF11-201ENST00000298281 DEFB133Q30KQ1 61 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms