RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 OR4C11Q6IEV9 310 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 EPGNQ6UW88 154 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 Q6ZPB1 254 aaPredicted RBP4.37□□□□□ -1.71
KARSP3-201ENST00000571212 PRSS58Q8IYP2 241 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 RNF175Q8N4F7 328 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 TBC1D19Q8N5T2 526 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 CCNYL1Q8N7R7 359 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 PCYOX1LQ8NBM8 494 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 ACBD4Q8NC06 268 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 PLPP5Q8NEB5 264 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 C7orf57Q8NEG2 295 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 CHPT1Q8WUD6 406 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 TWIST2Q8WVJ9 160 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 SELENOMQ8WWX9 145 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 KAT2AQ92830 837 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 RERGQ96A58 199 aaPredicted RBP4.37□□□□□ -1.71
KARSP3-201ENST00000571212 FAR2Q96K12 515 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 OR1F2PQ96R84 312 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 MTERF1Q99551 399 aaKnown RBP4.37□□□□□ -1.71
KARSP3-201ENST00000571212 TUBA1CQ9BQE3 449 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 PSD2Q9BQI7 771 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 MRPS26Q9BYN8 205 aaKnown RBP4.37□□□□□ -1.71
KARSP3-201ENST00000571212 MCCC2Q9HCC0 563 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 LYRM4Q9HD34 91 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 C14orf105Q9NVL8 296 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 KIF17Q9P2E2 1029 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 TEKT2Q9UIF3 430 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 SH3BGRL2Q9UJC5 107 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 CES1P1Q9UKY3 287 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 EXO1Q9UQ84 846 aaKnown RBP4.37□□□□□ -1.71
KARSP3-201ENST00000571212 AKAP9Q99996 3911 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 ABCA4P78363 2273 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 CSMD2Q7Z408 3487 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 DNAJC13O75165 2243 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 SCN3AQ9NY46 2000 aa4.37□□□□□ -1.71
KARSP3-201ENST00000571212 IGKV3D-11A0A0A0MRZ8 115 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 HMX3A6NHT5 357 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 C19orf84I3L1E1 186 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 RHODO00212 210 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 SDHDO14521 159 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 F10P00742 488 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 HMGN1P05114 100 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 HEXBP07686 556 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 IFI6P09912 130 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 OCM2P0CE71 109 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 OCMP0CE72 109 aaPredicted RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 UQCRBP14927 111 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 CD1EP15812 388 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 TCEA1P23193 301 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 KRT20P35900 424 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 FRKP42685 505 aaPredicted RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ARHGDIBP52566 201 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 IST1P53990 364 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 LIM2P55344 173 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 GNG2P59768 71 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 IGLV3-21P80748 117 aaPredicted RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 TLE4Q04727 773 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 EMX2Q04743 252 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 EEF1A2Q05639 463 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 SF3A3Q12874 501 aaKnown RBP eCLIP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 PDE7AQ13946 482 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 NDUFA9Q16795 377 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 TRMT5Q32P41 509 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 Q3ZCU0 254 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 SPIN4Q56A73 249 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ZNF766Q5HY98 468 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 C6orf136Q5SQH8 315 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 CLVS2Q5SYC1 327 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 SLX4IPQ5VYV7 408 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 TMEM205Q6UW68 189 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ABHD13Q7L211 337 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 PRSS41Q7RTY9 318 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 CAMKMTQ7Z624 323 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ADCK2Q7Z695 626 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 NKAIN4Q8IVV8 208 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 RIMKLAQ8IXN7 391 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 FBXL14Q8N1E6 418 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 CA13Q8N1Q1 262 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ACOT4Q8N9L9 421 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ENKURQ8TC29 256 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 MGARPQ8TDB4 240 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 PHF10Q8WUB8 498 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ATP6V1E2Q96A05 226 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 TM4SF18Q96CE8 201 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 MAGED4Q96JG8 741 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 IMMP1LQ96LU5 166 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 GPR137Q96N19 417 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 F2RL3Q96RI0 385 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 TREX2Q9BQ50 279 aaPredicted RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 NUDT16L1Q9BRJ7 211 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 CADM1Q9BY67 442 aaKnown RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ROGDIQ9GZN7 287 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 OR51B5Q9H339 312 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ELOVL6Q9H5J4 265 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 ZNF385DQ9H6B1 395 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 MKKSQ9NPJ1 570 aaPredicted RBP4.36□□□□□ -1.71
KARSP3-201ENST00000571212 SLC52A3Q9NQ40 469 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 SDHAF3Q9NRP4 125 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 MS4A12Q9NXJ0 267 aa4.36□□□□□ -1.71
KARSP3-201ENST00000571212 NDE1Q9NXR1 346 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms