RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 GABRR1P24046 479 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 TPBGQ13641 420 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 MRPL2Q5T653 305 aaKnown RBP11.1□□□□□ -0.63
NEK9-210ENST00000557026 BAHD1Q8TBE0 780 aaPredicted RBP11.1□□□□□ -0.63
NEK9-210ENST00000557026 C12orf43Q96C57 262 aaKnown RBP11.1□□□□□ -0.63
NEK9-210ENST00000557026 CDCP1Q9H5V8 836 aa11.1□□□□□ -0.63
NEK9-210ENST00000557026 IDSB3KWA1 339 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 GABRA2P47869 451 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 RAB13P51153 203 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 PNLIPRP2P54317 469 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 MLLT10P55197 1068 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 ERVK-25P63136 954 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 PIAS4Q8N2W9 510 aaPredicted RBP11.09□□□□□ -0.63
NEK9-210ENST00000557026 SGK3Q96BR1 496 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 MRGPRX4Q96LA9 322 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 AP1S3Q96PC3 154 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 ALG12Q9BV10 488 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 TMEM185BQ9H7F4 350 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 CARD8Q9Y2G2 431 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 NPFFR2Q9Y5X5 522 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 FOXO6A8MYZ6 492 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 ZNF732B4DXR9 585 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 M0R3H8 397 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 STSP08842 583 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 OR8U9P0C7N5 309 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 CD22P20273 847 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 MAOAP21397 527 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 PCMT1P22061 227 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 RAD52P43351 418 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 AKR1D1P51857 326 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 RAC1P63000 192 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 MLLT11Q13015 90 aaPredicted RBP11.09□□□□□ -0.63
NEK9-210ENST00000557026 EXOSC7Q15024 291 aaKnown RBP11.09□□□□□ -0.63
NEK9-210ENST00000557026 VWA2Q5GFL6 755 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 DUSP19Q8WTR2 217 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 PIGCQ92535 297 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 SYT11Q9BT88 431 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 RGCCQ9H4X1 137 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 C19orf53Q9UNZ5 99 aaPredicted RBP11.09□□□□□ -0.63
NEK9-210ENST00000557026 PCDHGA5Q9Y5G8 931 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 F6UZH7 168 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 CBX7O95931 251 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 BDKRB2P30411 391 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 STT3AP46977 705 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 RPL34P49207 117 aaKnown RBP11.09□□□□□ -0.63
NEK9-210ENST00000557026 GABREP78334 506 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 C22orf42Q6IC83 251 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 LINC00696Q6ZRV3 163 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 FBXL20Q96IG2 436 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 UBQLN2Q9UHD9 624 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 TIMM10BQ9Y5J6 103 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 A6NHS1 94 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 M0QZ24 198 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 PTTG1O95997 202 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 CHRM2P08172 466 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 S100A12P80511 92 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 PAN3Q58A45 887 aaKnown RBP11.09□□□□□ -0.63
NEK9-210ENST00000557026 RNF220Q5VTB9 566 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 NETO1Q8TDF5 533 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 ELP4Q96EB1 424 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 ZNF778Q96MU6 729 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 SLC30A3Q99726 388 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 CUEDC1Q9NWM3 386 aaPredicted RBP11.09□□□□□ -0.63
NEK9-210ENST00000557026 GNG12Q9UBI6 72 aa11.09□□□□□ -0.63
NEK9-210ENST00000557026 E9PI62 339 aa11.08□□□□□ -0.63
NEK9-210ENST00000557026 XRCC2O43543 280 aa11.08□□□□□ -0.63
NEK9-210ENST00000557026 LY86O95711 162 aa11.08□□□□□ -0.63
NEK9-210ENST00000557026 SNAP29O95721 258 aa11.08□□□□□ -0.63
NEK9-210ENST00000557026 CEACAM7Q14002 265 aa11.08□□□□□ -0.63
NEK9-210ENST00000557026 GALEQ14376 348 aa11.08□□□□□ -0.63
NEK9-210ENST00000557026 NDUFAF7Q7L592 441 aa11.08□□□□□ -0.63
NEK9-210ENST00000557026 BRIX1Q8TDN6 353 aaKnown RBP11.08□□□□□ -0.63
NEK9-210ENST00000557026 SLC35A4Q96G79 324 aa11.08□□□□□ -0.63
NEK9-210ENST00000557026 HDGFL3Q9Y3E1 203 aa11.08□□□□□ -0.63
NEK9-210ENST00000557026 TNFSF15O95150 251 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 TGM6O95932 706 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 FURINP09958 794 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 CR2P20023 1033 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 FPR3P25089 353 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 CAMLGP49069 296 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 SEMA3BQ13214 749 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 PIN1Q13526 163 aaPredicted RBP11.08□□□□□ -0.64
NEK9-210ENST00000557026 MFSD12Q6NUT3 480 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 MED25Q71SY5 747 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 SLC22A24Q8N4F4 322 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 GAB3Q8WWW8 586 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 CIDECQ96AQ7 238 aaPredicted RBP11.08□□□□□ -0.64
NEK9-210ENST00000557026 UHRF2Q96PU4 802 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 TXN2Q99757 166 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 NXF5Q9H1B4 397 aaKnown RBP11.08□□□□□ -0.64
NEK9-210ENST00000557026 PRSS21Q9Y6M0 314 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 NUP98P52948 1817 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 LILRB5O75023 590 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 IGLV3-27P01718 113 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 KITLGP21583 273 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 DNASE1P24855 282 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 MAGEA3P43357 314 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 RPS27LQ71UM5 84 aaKnown RBP11.08□□□□□ -0.64
NEK9-210ENST00000557026 SLC35D2Q76EJ3 337 aa11.08□□□□□ -0.64
NEK9-210ENST00000557026 GALNT11Q8NCW6 608 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms