RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 ZNF544Q6NX49 715 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 ARCQ7LC44 396 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 PRSS48Q7RTY5 328 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 TIPARPQ7Z3E1 657 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 ZNF571Q7Z3V5 609 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 TAF8Q7Z7C8 310 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 ADCK1Q86TW2 530 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 HORMAD1Q86X24 394 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 SLC13A5Q86YT5 568 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 PLCZ1Q86YW0 608 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 C12orf56Q8IXR9 622 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 LYG1Q8N1E2 194 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 POM121L12Q8N7R1 296 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 ANKFN1Q8N957 763 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 FNDC5Q8NAU1 212 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 CCNYQ8ND76 341 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 ZNF680Q8NEM1 530 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 TMEM185AQ8NFB2 350 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 FANK1Q8TC84 345 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 PHF10Q8WUB8 498 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 PYDC1Q8WXC3 89 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 TAF15Q92804 592 aaKnown RBP eCLIP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 HIST1H2ACQ93077 130 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 TOMM40LQ969M1 308 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 NABP1Q96AH0 204 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 TMIGD2Q96BF3 282 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 RAB39BQ96DA2 213 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 C16orf58Q96GQ5 468 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 PCED1BQ96HM7 432 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 CNBD2Q96M20 576 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 NSMCE2Q96MF7 247 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 PYGO2Q9BRQ0 406 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 DCTN5Q9BTE1 182 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 RBM24Q9BX46 236 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 FTHL17Q9BXU8 183 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 TRIM9Q9C026 710 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 ATG10Q9H0Y0 220 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 LHX5Q9H2C1 402 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 BLZF1Q9H2G9 400 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 ADNPQ9H2P0 1102 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 GNB4Q9HAV0 340 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 NGBQ9NPG2 151 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 TIGARQ9NQ88 270 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 C20orf96Q9NUD7 363 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 SMOXQ9NWM0 555 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 PAQR5Q9NXK6 330 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 IL37Q9NZH6 218 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 THYN1Q9P016 225 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 PSMC3IPQ9P2W1 217 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 GLS2Q9UI32 602 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 ZNF221Q9UK13 617 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 NIP7Q9Y221 180 aaKnown RBP eCLIP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 PLEKHA6Q9Y2H5 1048 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 CAB39Q9Y376 341 aaPredicted RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 RBMX2Q9Y388 322 aaKnown RBP3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 STYXL1Q9Y6J8 313 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 NRCAMQ92823 1304 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 ADAMTSL3P82987 1691 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 MYH10P35580 1976 aa3.11□□□□□ -1.91
ECHDC1-217ENST00000488087 RIC1Q4ADV7 1423 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 SCN4AP35499 1836 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 KIF13AQ9H1H9 1805 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 TRAV6A0A075B6T7 132 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 A0A0G2JND7 137 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 EXOC1LA0A1B0GW35 172 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 A0A1W2PPR1 153 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 ATP6V1G2-DDX39BF2Z307 99 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 I3L4J1 428 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 J3QRK9 145 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 CXCL11O14625 94 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 HDAC3O15379 428 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 UPK1BO75841 260 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 ANXA9O76027 345 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 CIAO1O76071 339 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 OR7A10O76100 309 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 CCNE2O96020 404 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 CXCL10P02778 98 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 KRT7P08729 469 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 HOXD4P09016 255 aaPredicted RBP3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 RALBP11234 206 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 ICAM2P13598 275 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 GFAPP14136 432 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 ZNF3P17036 446 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 LMO2P25791 158 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 CASP1P29466 404 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 ERP29P30040 261 aaKnown RBP3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 HOXA6P31267 233 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 RPS5P46782 204 aaKnown RBP3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 SERPINB10P48595 397 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 SLC1A6P48664 564 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 NPY2RP49146 381 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 PGFP49763 221 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 VBP1P61758 197 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 COPZ1P61923 177 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 LMO4P61968 165 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 INCA1Q0VD86 236 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 BNIP2Q12982 314 aa3.1□□□□□ -1.91
ECHDC1-217ENST00000488087 PDK2Q15119 407 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms