RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 SMIM11AP58511 58 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 MAXP61244 160 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 PNLIPRP3Q17RR3 467 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SLC5A12Q1EHB4 618 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 PLEKHN1Q494U1 663 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 ARSJQ5FYB0 599 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 VHLLQ6RSH7 139 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 ANKRD33Q7Z3H0 272 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 C6orf120Q7Z4R8 191 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 NRSN1Q8IZ57 195 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 C10orf111Q8N326 155 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF485Q8NCK3 441 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 OR10G2Q8NGC3 310 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SMAP2Q8WU79 429 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 HSH2DQ96JZ2 352 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 LINC00615Q96LM1 132 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 CCDC74BQ96LY2 380 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 NRIP2Q9BQI9 281 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 TMEM106CQ9BVX2 250 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 TEX101Q9BY14 249 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 TUBA4BQ9H853 241 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SEC61A2Q9H9S3 476 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 NMRK2Q9NPI5 230 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 TBC1D3KA0A087X1G2 549 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 A0A1W2PN81 502 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 MAGEB17A8MXT2 336 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 PHOX2AO14813 284 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 TSPAN2O60636 221 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SH3BGRLO75368 114 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 RDH16O75452 317 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 ITGA10O75578 1167 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 GCM2O75603 506 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 NFATC1O95644 943 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 WNT1P04628 370 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 RPLP1P05386 114 aaKnown RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SFTPBP07988 381 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SPARCP09486 303 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 CLTBP09497 229 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 GABRA5P31644 462 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 CHRNA7P36544 502 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 RAD52P43351 418 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 DLX5P56178 289 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 NDUFA6P56556 154 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 TAP2Q03519 686 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 TPBGQ13641 420 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SLC10A1Q14973 349 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SF1Q15637 639 aaKnown RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 CHRFAM7AQ494W8 412 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 MESTQ5EB52 335 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 RNASE12Q5GAN4 147 aaKnown RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 ATAT1Q5SQI0 421 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 FRG2Q64ET8 278 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 C18orf63Q68DL7 685 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 GDF6Q6KF10 455 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF813Q6ZN06 617 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SLC24A5Q71RS6 500 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SLC16A14Q7RTX9 510 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 C5orf24Q7Z6I8 188 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 IQCHQ86VS3 1027 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 PARGQ86W56 976 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 GJD3Q8N144 294 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 OR6V1Q8N148 313 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF283Q8N7M2 679 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 NUDT10Q8NFP7 164 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 OR56B1Q8NGI3 324 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 OR4A4PQ8NGN8 299 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 PIGKQ92643 395 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 RSC1A1Q92681 617 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 KCTD12Q96CX2 325 aaKnown RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 MVB12AQ96EY5 273 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 CPNE2Q96FN4 548 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 ZNF845Q96IR2 970 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 FRG2BQ96QU4 278 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 INSM2Q96T92 566 aaPredicted RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 OR10A4Q9H209 315 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SARS2Q9NP81 518 aaKnown RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 RPS10P5Q9NQ39 176 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 SPHK2Q9NRA0 654 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 MAN2C1Q9NTJ4 1040 aa6.14□□□□□ -1.43
ZNF540-201ENST00000316433 TESQ9UGI8 421 aaKnown RBP6.14□□□□□ -1.43
ZNF540-201ENST00000316433 A0A1B0GVC2 190 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 TRDV1A0A1B0GX56 115 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 LNP1A1A4G5 178 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 TBC1D3BA6NDS4 549 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 OR51F1A6NGY5 319 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 A6NIN4 97 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 SLC38A8A6NNN8 435 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 TCF21O43680 179 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 NARSO43776 548 aaKnown RBP6.13□□□□□ -1.43
ZNF540-201ENST00000316433 FKTNO75072 461 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 CA11O75493 328 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 ABLIM3O94929 683 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 FGF7P21781 194 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 TEAD1P28347 426 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 ACVRL1P37023 503 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 AKR1C3P42330 323 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 PGFP49763 221 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 CCR4P51679 360 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 GAS1P54826 345 aa6.13□□□□□ -1.43
ZNF540-201ENST00000316433 RPL38P63173 70 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms