RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 MOSPD2Q8NHP6 518 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 TMCO6Q96DC7 493 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 GUCD1Q96NT3 240 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 NMNAT3Q96T66 252 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 MIXL1Q9H2W2 232 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 MMP25Q9NPA2 562 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 C14orf119Q9NWQ9 140 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 PILRBQ9UKJ0 227 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 ZMIZ1Q9ULJ6 1067 aa11.8□□□□□ -0.52
SPTLC1-201ENST00000262554 CACNA1EQ15878 2313 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 FABP12A6NFH5 140 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 ALG1L2C9J202 215 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 HIST1H2ABP04908 130 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 MST1P26927 711 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 ITPKBP27987 946 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 AQP2P41181 271 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 MTNR1BP49286 362 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 DIO1P49895 249 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 CAV3P56539 151 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 OR12D2P58182 307 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 ZNF79Q15937 498 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.79□□□□□ -0.525e-7■□□□□ 8.1
SPTLC1-201ENST00000262554 MZT2AQ6P582 158 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 XKRXQ6PP77 449 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 SHISA6Q6ZSJ9 500 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 HIST3H2AQ7L7L0 130 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 MARCH3Q86UD3 253 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 WDR5BQ86VZ2 330 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 JAZF1Q86VZ6 243 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 SLC35F2Q8IXU6 374 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 CADM3Q8N126 398 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 ZNF441Q8N8Z8 693 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 FAM181AQ8N9Y4 354 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 OR4D9Q8NGE8 314 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 OR51L1Q8NGJ5 315 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 SETD6Q8TBK2 473 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 STT3BQ8TCJ2 826 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 SAP25Q8TEE9 199 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 SMAP2Q8WU79 429 aaPredicted RBP11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 HIST1H2ACQ93077 130 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 RASD2Q96D21 266 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 MRPL48Q96GC5 212 aaKnown RBP11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 MOGAT1Q96PD6 335 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 OR6C1Q96RD1 312 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 SRRQ9GZT4 340 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 ADAM19Q9H013 955 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 PI4KAP42356 2102 aa11.79□□□□□ -0.52
SPTLC1-201ENST00000262554 E9PI62 339 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 SIGLEC6O43699 453 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 NUDT14O95848 222 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 CD14P08571 375 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 ASAH2BP0C7U1 165 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 APEHP13798 732 aaKnown RBP11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 SPI1P17947 270 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 PGCP20142 388 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 CXCR1P25024 350 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 PYCR1P32322 319 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 CCL7P80098 99 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 EGR4Q05215 589 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 SLC3A1Q07837 685 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 IL10RAQ13651 578 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 HLA-BQ31612 363 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 GLYR1Q49A26 553 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 ALG10Q5BKT4 473 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 ZMAT1Q5H9K5 638 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 SYS1Q8N2H4 156 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 KIAA1143Q96AT1 154 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 RNF31Q96EP0 1072 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 DEPDC7Q96QD5 511 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 KCNK17Q96T54 332 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 DDOQ99489 341 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 NMNAT2Q9BZQ4 307 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 RTN4RQ9BZR6 473 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 PRDM6Q9NQX0 595 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 SLC22A11Q9NSA0 550 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 COMMD3Q9UBI1 195 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 MUTYHQ9UIF7 546 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 RARRES3Q9UL19 164 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 IGLV3-12A0A075B6K2 115 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 LY6G6EA0A0G2JKS1 128 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 TEX13CA0A0J9YWL9 993 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 SHISA3A0PJX4 238 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 OR6C68A6NDL8 312 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 IMPA2O14732 288 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 GMFGO60234 142 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 CDC40O60508 579 aaKnown RBP eCLIP11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 TMCC2O75069 709 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 SERPINI2O75830 405 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 NCR1O76036 304 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 TFP02787 698 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 HEXBP07686 556 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 GP1BBP13224 206 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 AZGP1P25311 298 aaKnown RBP11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 UQCRC1P31930 480 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 NAA10P41227 235 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 CD97P48960 835 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 GBX2P52951 348 aaPredicted RBP11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 NRG3P56975 720 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 CTXN1P60606 82 aa11.78□□□□□ -0.52
SPTLC1-201ENST00000262554 E2F1Q01094 437 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 134.9 ms