RNA–Protein interactions for RNA: ENST00000641336.1

SAMMSON-213, survival associated mitochondrial melanoma specific oncogenic non-coding RNA, humanhuman

BASIC

Gene SAMMSON, Length 1,521 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMMSON-213ENST00000641336 LCA5Q86VQ0 697 aa6.29□□□□□ -1.4
SAMMSON-213ENST00000641336 LMNTD2Q8IXW0 634 aa6.29□□□□□ -1.4
SAMMSON-213ENST00000641336 CCDC102AQ96A19 550 aa6.29□□□□□ -1.4
SAMMSON-213ENST00000641336 RUNDC1Q96C34 613 aa6.29□□□□□ -1.4
SAMMSON-213ENST00000641336 ZNF512BQ96KM6 892 aaPredicted RBP6.29□□□□□ -1.4
SAMMSON-213ENST00000641336 CALR3Q96L12 384 aaKnown RBP6.29□□□□□ -1.4
SAMMSON-213ENST00000641336 TBC1D2Q9BYX2 928 aa6.29□□□□□ -1.4
SAMMSON-213ENST00000641336 C22orf23Q9BZE7 217 aa6.29□□□□□ -1.4
SAMMSON-213ENST00000641336 NUCKS1Q9H1E3 243 aaKnown RBP6.29□□□□□ -1.4
SAMMSON-213ENST00000641336 KNSTRNQ9Y448 316 aa6.29□□□□□ -1.4
SAMMSON-213ENST00000641336 TBX22Q9Y458 520 aa6.29□□□□□ -1.4
SAMMSON-213ENST00000641336 WDR97A6NE52 1622 aa6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 HIP1RO75146 1068 aa6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 S100BP04271 92 aaPredicted RBP6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 TPM3P06753 285 aa6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 SRSF11Q05519 484 aaKnown RBP6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 DHX8Q14562 1220 aaKnown RBP6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 KCTD2Q14681 263 aa6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 MSL1Q68DK7 614 aa6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 KRT77Q7Z794 578 aa6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 METTL3Q86U44 580 aaKnown RBP6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 VWA5B2Q8N398 1253 aa6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 SAMD3Q8N6K7 520 aa6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 GIPC2Q8TF65 315 aa6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 PNNQ9H307 717 aaKnown RBP6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 ZFAND3Q9H8U3 227 aa6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 KLF15Q9UIH9 416 aa6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 GNEQ9Y223 722 aaKnown RBP6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 ZNF330Q9Y3S2 320 aaPredicted RBP6.28□□□□□ -1.4
SAMMSON-213ENST00000641336 KRBA1A5PL33 1030 aa6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 NBPF7P0C2Y1 421 aaPredicted RBP6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 MS4A1P11836 297 aa6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 RNF187Q5TA31 235 aaPredicted RBP6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 PODNQ7Z5L7 613 aa6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 CCDC155Q8N6L0 562 aa6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 SVIPQ8NHG7 77 aa6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 PIK3R5Q8WYR1 880 aa6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 ERCC4Q92889 916 aaPredicted RBP6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 IL17RAQ96F46 866 aa6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 AGAP3Q96P47 875 aa6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 KRTAP4-9Q9BYQ8 210 aa6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 LRRC27Q9C0I9 530 aa6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 CHCHD3Q9NX63 227 aaKnown RBP6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 UTP6Q9NYH9 597 aaKnown RBP6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 ZHX1Q9UKY1 873 aaPredicted RBP6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 G3BP2Q9UN86 482 aaKnown RBP6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 COL4A3BPQ9Y5P4 624 aa6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 CUL7Q14999 1698 aa6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 LAMC3Q9Y6N6 1575 aa6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 KIF16BQ96L93 1317 aa6.27□□□□□ -1.41
SAMMSON-213ENST00000641336 KIF21AQ7Z4S6 1674 aa6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 PABPN1LA6NDY0 278 aaKnown RBP6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 ZIC2O95409 532 aaPredicted RBP6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 LDHCP07864 332 aa6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 CCDC175P0C221 793 aa6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 TGFB3P10600 412 aa6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 CTR9Q6PD62 1173 aa6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 C16orf87Q6PH81 154 aa6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 SV2AQ7L0J3 742 aa6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 LINC00528Q8N1L1 170 aa6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 PCMTD1Q96MG8 357 aaPredicted RBP6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 NEUROD6Q96NK8 337 aa6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 NCAPGQ9BPX3 1015 aa6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 SMC4Q9NTJ3 1288 aa6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 DONSONQ9NYP3 566 aa6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 ACAD8Q9UKU7 415 aa6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 CHMP3Q9Y3E7 222 aa6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 ARHGAP35Q9NRY4 1499 aa6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 CFAP43Q8NDM7 1665 aa6.26□□□□□ -1.41
SAMMSON-213ENST00000641336 MTA2O94776 668 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 TRPC1P48995 793 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 ZMYM1Q5SVZ6 1142 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 CCDC70Q6NSX1 233 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 NPAS4Q8IUM7 802 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 IQCF2Q8IXL9 164 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 GOLGA1Q92805 767 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 KRTAP4-2Q9BYR5 136 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 MUC3BQ9H195 1237 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 CASS4Q9NQ75 786 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 NESP48681 1621 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 TOPBP1Q92547 1522 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 CFAP65Q6ZU64 1925 aaKnown RBP6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 UPP2O95045 317 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 IGHDP01880 384 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 CLK1P49759 484 aaKnown RBP6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 UBE4AQ14139 1066 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 SOGA3Q5TF21 947 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 FMNL3Q8IVF7 1028 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 NLGN1Q8N2Q7 840 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 PAF1Q8N7H5 531 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 MIGA1Q8NAN2 632 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 PPM1EQ8WY54 764 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 ITPKCQ96DU7 683 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 TANGO6Q9C0B7 1094 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 CGNQ9P2M7 1197 aaKnown RBP6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 PAXBP1Q9Y5B6 917 aa6.25□□□□□ -1.41
SAMMSON-213ENST00000641336 CCP110O43303 1012 aa6.24□□□□□ -1.41
SAMMSON-213ENST00000641336 HTATSF1O43719 755 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms