RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 DBNDD2Q9BQY9 259 aa17.31■□□□□ 0.36
SCARB2-221ENST00000640341 TM6SF1Q9BZW5 370 aa17.31■□□□□ 0.36
SCARB2-221ENST00000640341 PYCARDQ9ULZ3 195 aa17.31■□□□□ 0.36
SCARB2-221ENST00000640341 NEURL1BA8MQ27 555 aa17.31■□□□□ 0.36
SCARB2-221ENST00000640341 RPS6KB1P23443 525 aa17.31■□□□□ 0.36
SCARB2-221ENST00000640341 GUCY1B3Q02153 619 aa17.31■□□□□ 0.36
SCARB2-221ENST00000640341 GCKRQ14397 625 aa17.31■□□□□ 0.36
SCARB2-221ENST00000640341 CHST3Q7LGC8 479 aa17.31■□□□□ 0.36
SCARB2-221ENST00000640341 DBNLQ9UJU6 430 aaKnown RBP17.31■□□□□ 0.36
SCARB2-221ENST00000640341 USP42Q9H9J4 1324 aaKnown RBP17.31■□□□□ 0.36
SCARB2-221ENST00000640341 A0A087WZG4 1122 aa17.31■□□□□ 0.36
SCARB2-221ENST00000640341 ANO6Q4KMQ2 910 aa17.31■□□□□ 0.36
SCARB2-221ENST00000640341 ANKRD13DQ6ZTN6 518 aa17.31■□□□□ 0.36
SCARB2-221ENST00000640341 BRF1Q92994 677 aa17.31■□□□□ 0.36
SCARB2-221ENST00000640341 ANKARQ7Z5J8 1434 aa17.3■□□□□ 0.36
SCARB2-221ENST00000640341 A0A087WWV3 80 aa17.3■□□□□ 0.36
SCARB2-221ENST00000640341 CCT2P78371 535 aaKnown RBP17.3■□□□□ 0.36
SCARB2-221ENST00000640341 TOB2Q14106 344 aaPredicted RBP17.3■□□□□ 0.36
SCARB2-221ENST00000640341 PDCP20941 246 aa17.3■□□□□ 0.36
SCARB2-221ENST00000640341 TYRO3Q06418 890 aa17.3■□□□□ 0.36
SCARB2-221ENST00000640341 Q6ZUG5 572 aa17.3■□□□□ 0.36
SCARB2-221ENST00000640341 TRIM5Q9C035 493 aa17.3■□□□□ 0.36
SCARB2-221ENST00000640341 PRDM10Q9NQV6 1147 aa17.3■□□□□ 0.36
SCARB2-221ENST00000640341 PTGS1P23219 599 aa17.3■□□□□ 0.36
SCARB2-221ENST00000640341 PDIA6Q15084 440 aa17.3■□□□□ 0.36
SCARB2-221ENST00000640341 KRT28Q7Z3Y7 464 aa17.3■□□□□ 0.36
SCARB2-221ENST00000640341 CCDC85AQ96PX6 553 aaPredicted RBP17.29■□□□□ 0.36
SCARB2-221ENST00000640341 NEK1Q96PY6 1258 aa17.29■□□□□ 0.36
SCARB2-221ENST00000640341 FTOQ9C0B1 505 aaKnown RBP eCLIP17.29■□□□□ 0.36
SCARB2-221ENST00000640341 DYNC1I1O14576 645 aa17.28■□□□□ 0.36
SCARB2-221ENST00000640341 NR1I2O75469 434 aa17.28■□□□□ 0.36
SCARB2-221ENST00000640341 TAF5LO75529 589 aa17.28■□□□□ 0.36
SCARB2-221ENST00000640341 ANKRD1Q15327 319 aa17.28■□□□□ 0.36
SCARB2-221ENST00000640341 DNAJC25Q9H1X3 360 aa17.28■□□□□ 0.36
SCARB2-221ENST00000640341 ERCC4Q92889 916 aaPredicted RBP17.28■□□□□ 0.36
SCARB2-221ENST00000640341 GOLIM4O00461 696 aa17.27■□□□□ 0.36
SCARB2-221ENST00000640341 TIMM10P62072 90 aa17.27■□□□□ 0.36
SCARB2-221ENST00000640341 LRMPQ12912 555 aa17.27■□□□□ 0.36
SCARB2-221ENST00000640341 FUCA2Q9BTY2 467 aa17.27■□□□□ 0.36
SCARB2-221ENST00000640341 TERF1P54274 439 aa17.27■□□□□ 0.36
SCARB2-221ENST00000640341 TNNI3KQ59H18 835 aa17.27■□□□□ 0.36
SCARB2-221ENST00000640341 LMBR1LQ6UX01 489 aa17.27■□□□□ 0.36
SCARB2-221ENST00000640341 LEO1Q8WVC0 666 aaPredicted RBP17.27■□□□□ 0.36
SCARB2-221ENST00000640341 NRBP1Q9UHY1 535 aa17.27■□□□□ 0.36
SCARB2-221ENST00000640341 FPGT-TNNI3KV9GXZ4 949 aa17.27■□□□□ 0.36
SCARB2-221ENST00000640341 CCDC186Q7Z3E2 898 aa17.27■□□□□ 0.35
SCARB2-221ENST00000640341 FAM200AQ8TCP9 573 aa17.27■□□□□ 0.35
SCARB2-221ENST00000640341 LRRC37A3O60309 1634 aa17.26■□□□□ 0.35
SCARB2-221ENST00000640341 KCNF1Q9H3M0 494 aa17.26■□□□□ 0.35
SCARB2-221ENST00000640341 MRVI1Q9Y6F6 885 aa17.26■□□□□ 0.35
SCARB2-221ENST00000640341 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
SCARB2-221ENST00000640341 RAB11FIP4Q86YS3 637 aa17.26■□□□□ 0.35
SCARB2-221ENST00000640341 SCAND2PQ9GZW5 306 aaPredicted RBP17.26■□□□□ 0.35
SCARB2-221ENST00000640341 NCOA5Q9HCD5 579 aaKnown RBP17.26■□□□□ 0.35
SCARB2-221ENST00000640341 CYP21A2P08686 494 aa17.25■□□□□ 0.35
SCARB2-221ENST00000640341 TATP17735 454 aaPredicted RBP17.25■□□□□ 0.35
SCARB2-221ENST00000640341 SLC52A2Q9HAB3 445 aa17.25■□□□□ 0.35
SCARB2-221ENST00000640341 A0A0G2JLW4 131 aa17.25■□□□□ 0.35
SCARB2-221ENST00000640341 GOLGA6L6A8MZA4 724 aa17.25■□□□□ 0.35
SCARB2-221ENST00000640341 METTL22Q9BUU2 404 aaPredicted RBP17.25■□□□□ 0.35
SCARB2-221ENST00000640341 CBX8Q9HC52 389 aa17.25■□□□□ 0.35
SCARB2-221ENST00000640341 PTPN12Q05209 780 aaKnown RBP17.25■□□□□ 0.35
SCARB2-221ENST00000640341 APOBRQ0VD83 1088 aa17.25■□□□□ 0.35
SCARB2-221ENST00000640341 C16orf45Q96MC5 204 aaPredicted RBP17.25■□□□□ 0.35
SCARB2-221ENST00000640341 ARHGAP23Q9P227 1491 aa17.24■□□□□ 0.35
SCARB2-221ENST00000640341 CHAF1AQ13111 956 aaPredicted RBP17.24■□□□□ 0.35
SCARB2-221ENST00000640341 ZNF165P49910 485 aa17.24■□□□□ 0.35
SCARB2-221ENST00000640341 MYRIPQ8NFW9 859 aa17.24■□□□□ 0.35
SCARB2-221ENST00000640341 ZNF592Q92610 1267 aa17.24■□□□□ 0.35
SCARB2-221ENST00000640341 ZNF594Q96JF6 807 aaPredicted RBP17.24■□□□□ 0.35
SCARB2-221ENST00000640341 SNRKQ9NRH2 765 aa17.24■□□□□ 0.35
SCARB2-221ENST00000640341 SLIT1O75093 1534 aa17.23■□□□□ 0.35
SCARB2-221ENST00000640341 HSP90AB3PQ58FF7 597 aa17.23■□□□□ 0.35
SCARB2-221ENST00000640341 ZBTB3Q9H5J0 574 aa17.23■□□□□ 0.35
SCARB2-221ENST00000640341 NPHP3Q7Z494 1330 aa17.23■□□□□ 0.35
SCARB2-221ENST00000640341 TUBGCP6Q96RT7 1819 aa17.23■□□□□ 0.35
SCARB2-221ENST00000640341 PGBD1Q96JS3 809 aa17.23■□□□□ 0.35
SCARB2-221ENST00000640341 CACNA1FO60840 1977 aa17.23■□□□□ 0.35
SCARB2-221ENST00000640341 KIF3AQ9Y496 699 aa17.22■□□□□ 0.35
SCARB2-221ENST00000640341 ERBB3P21860 1342 aa17.22■□□□□ 0.35
SCARB2-221ENST00000640341 HAND2P61296 217 aa17.22■□□□□ 0.35
SCARB2-221ENST00000640341 FKBP4Q02790 459 aaKnown RBP eCLIP17.22■□□□□ 0.35
SCARB2-221ENST00000640341 KCNB2Q92953 911 aa17.22■□□□□ 0.35
SCARB2-221ENST00000640341 COL15A1P39059 1388 aa17.22■□□□□ 0.35
SCARB2-221ENST00000640341 CABP4P57796 275 aa17.22■□□□□ 0.35
SCARB2-221ENST00000640341 SCRN1Q12765 414 aa17.22■□□□□ 0.35
SCARB2-221ENST00000640341 MCMDC2Q4G0Z9 681 aa17.22■□□□□ 0.35
SCARB2-221ENST00000640341 GTF3C6Q969F1 213 aa17.22■□□□□ 0.35
SCARB2-221ENST00000640341 HMG20BQ9P0W2 317 aa17.21■□□□□ 0.35
SCARB2-221ENST00000640341 LTN1O94822 1766 aa17.21■□□□□ 0.35
SCARB2-221ENST00000640341 RGPD2P0DJD1 1756 aa17.21■□□□□ 0.35
SCARB2-221ENST00000640341 SNRPA1P09661 255 aaKnown RBP17.21■□□□□ 0.35
SCARB2-221ENST00000640341 NPHP4O75161 1426 aaPredicted RBP17.21■□□□□ 0.35
SCARB2-221ENST00000640341 KIF13AQ9H1H9 1805 aa17.21■□□□□ 0.35
SCARB2-221ENST00000640341 PHKG2P15735 406 aa17.21■□□□□ 0.34
SCARB2-221ENST00000640341 KIAA1524Q8TCG1 905 aa17.21■□□□□ 0.34
SCARB2-221ENST00000640341 GOLGA6L19H0YKK7 550 aa17.2■□□□□ 0.34
SCARB2-221ENST00000640341 ATP5JP18859 108 aa17.2■□□□□ 0.34
SCARB2-221ENST00000640341 HMGN5P82970 282 aaKnown RBP17.2■□□□□ 0.34
SCARB2-221ENST00000640341 CBX1P83916 185 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms