RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 CELF1Q92879 486 aaKnown RBP27.7■■■□□ 2.02
SCN1B-206ENST00000638536 SEC31BQ9NQW1 1179 aa27.69■■■□□ 2.02
SCN1B-206ENST00000638536 DICER1Q9UPY3 1922 aaKnown RBP27.69■■■□□ 2.02
SCN1B-206ENST00000638536 PTPRCP08575 1304 aa27.68■■■□□ 2.02
SCN1B-206ENST00000638536 LMNB1P20700 586 aa27.67■■■□□ 2.02
SCN1B-206ENST00000638536 GRAPQ13588 217 aa27.67■■■□□ 2.02
SCN1B-206ENST00000638536 SOGA3Q5TF21 947 aa27.67■■■□□ 2.02
SCN1B-206ENST00000638536 GRAPLQ8TC17 118 aaPredicted RBP27.67■■■□□ 2.02
SCN1B-206ENST00000638536 TAOK3Q9H2K8 898 aa27.67■■■□□ 2.02
SCN1B-206ENST00000638536 NOB1Q9ULX3 412 aaKnown RBP27.67■■■□□ 2.02
SCN1B-206ENST00000638536 LTBP3Q9NS15 1303 aa27.66■■■□□ 2.02
SCN1B-206ENST00000638536 BCAR3O75815 825 aa27.65■■■□□ 2.02
SCN1B-206ENST00000638536 BRPF1P55201 1214 aaPredicted RBP27.65■■■□□ 2.02
SCN1B-206ENST00000638536 ZNF526Q8TF50 670 aaPredicted RBP27.65■■■□□ 2.02
SCN1B-206ENST00000638536 ATP6V0A2Q9Y487 856 aa27.65■■■□□ 2.02
SCN1B-206ENST00000638536 BBOX1O75936 387 aa27.64■■■□□ 2.02
SCN1B-206ENST00000638536 CTSWP56202 376 aa27.64■■■□□ 2.02
SCN1B-206ENST00000638536 TTLL11Q8NHH1 800 aa27.64■■■□□ 2.02
SCN1B-206ENST00000638536 SRCIN1Q9C0H9 1055 aa27.64■■■□□ 2.02
SCN1B-206ENST00000638536 FKBP4Q02790 459 aaKnown RBP eCLIP27.63■■■□□ 2.01
SCN1B-206ENST00000638536 RTKN2Q8IZC4 609 aa27.63■■■□□ 2.01
SCN1B-206ENST00000638536 ZNF277Q9NRM2 450 aaPredicted RBP27.63■■■□□ 2.01
SCN1B-206ENST00000638536 TIAM2Q8IVF5 1701 aa27.63■■■□□ 2.01
SCN1B-206ENST00000638536 ALDH1L1O75891 902 aa27.62■■■□□ 2.01
SCN1B-206ENST00000638536 HSP90B1P14625 803 aaKnown RBP27.62■■■□□ 2.01
SCN1B-206ENST00000638536 CCDC152Q4G0S7 254 aa27.62■■■□□ 2.01
SCN1B-206ENST00000638536 LRRC37AA6NMS7 1700 aa27.61■■■□□ 2.01
SCN1B-206ENST00000638536 GRM8O00222 908 aa27.61■■■□□ 2.01
SCN1B-206ENST00000638536 SP8Q8IXZ3 490 aa27.61■■■□□ 2.01
SCN1B-206ENST00000638536 PLA2G12BQ9BX93 195 aa27.61■■■□□ 2.01
SCN1B-206ENST00000638536 GREM2Q9H772 168 aa27.61■■■□□ 2.01
SCN1B-206ENST00000638536 SPEF2Q9C093 1822 aa27.61■■■□□ 2.01
SCN1B-206ENST00000638536 EPHA10Q5JZY3 1008 aa27.6■■■□□ 2.01
SCN1B-206ENST00000638536 CC2D2BQ6DHV5 1058 aa27.6■■■□□ 2.01
SCN1B-206ENST00000638536 RPS8P62241 208 aaKnown RBP27.59■■■□□ 2.01
SCN1B-206ENST00000638536 NBPF7P0C2Y1 421 aaPredicted RBP27.59■■■□□ 2.01
SCN1B-206ENST00000638536 FOXO4P98177 505 aa27.59■■■□□ 2.01
SCN1B-206ENST00000638536 PSMD1Q99460 953 aa27.59■■■□□ 2.01
SCN1B-206ENST00000638536 TNNQ9UQP3 1299 aa27.59■■■□□ 2.01
SCN1B-206ENST00000638536 COL4A5P29400 1685 aa27.58■■■□□ 2.01
SCN1B-206ENST00000638536 C9orf78Q9NZ63 289 aaPredicted RBP27.58■■■□□ 2.01
SCN1B-206ENST00000638536 CSF1RP07333 972 aa27.57■■■□□ 2
SCN1B-206ENST00000638536 KAZALD1Q96I82 304 aa27.56■■■□□ 2
SCN1B-206ENST00000638536 FAM161AQ3B820 660 aa27.56■■■□□ 2
SCN1B-206ENST00000638536 DUOX1Q9NRD9 1551 aa27.55■■■□□ 2
SCN1B-206ENST00000638536 IARSP41252 1262 aaKnown RBP27.55■■■□□ 2
SCN1B-206ENST00000638536 MPNDQ8N594 471 aa27.55■■■□□ 2
SCN1B-206ENST00000638536 SUCLG2Q96I99 432 aa27.55■■■□□ 2
SCN1B-206ENST00000638536 UTYO14607 1347 aa27.54■■■□□ 2
SCN1B-206ENST00000638536 USP44Q9H0E7 712 aa27.54■■■□□ 2
SCN1B-206ENST00000638536 LTBP1Q14766 1721 aa27.54■■■□□ 2
SCN1B-206ENST00000638536 KIF16BQ96L93 1317 aa27.54■■■□□ 2
SCN1B-206ENST00000638536 DPP8Q6V1X1 898 aaPredicted RBP27.53■■■□□ 2
SCN1B-206ENST00000638536 FRAT1Q92837 279 aaPredicted RBP27.53■■■□□ 2
SCN1B-206ENST00000638536 API5Q9BZZ5 524 aaKnown RBP27.53■■■□□ 2
SCN1B-206ENST00000638536 GPBP1L1Q9HC44 474 aaPredicted RBP27.53■■■□□ 2
SCN1B-206ENST00000638536 RTL9Q8NET4 1388 aa27.53■■■□□ 2
SCN1B-206ENST00000638536 ITGA6P23229 1130 aa27.52■■■□□ 2
SCN1B-206ENST00000638536 GPSM2P81274 684 aa27.52■■■□□ 2
SCN1B-206ENST00000638536 TMC4Q7Z404 712 aa27.52■■■□□ 2
SCN1B-206ENST00000638536 RTFDC1Q9BY42 306 aaPredicted RBP27.52■■■□□ 2
SCN1B-206ENST00000638536 TMX4Q9H1E5 349 aaPredicted RBP27.52■■■□□ 2
SCN1B-206ENST00000638536 GRIPAP1Q4V328 841 aa27.52■■■□□ 2
SCN1B-206ENST00000638536 LMBR1LQ6UX01 489 aa27.52■■■□□ 2
SCN1B-206ENST00000638536 ANKRD18AQ8IVF6 992 aa27.52■■■□□ 2
SCN1B-206ENST00000638536 ARHGAP45Q92619 1136 aa27.52■■■□□ 2
SCN1B-206ENST00000638536 TRIM27P14373 513 aa27.51■■□□□ 1.99
SCN1B-206ENST00000638536 NSFL1CQ9UNZ2 370 aaKnown RBP27.51■■□□□ 1.99
SCN1B-206ENST00000638536 AOC3Q16853 763 aa27.5■■□□□ 1.99
SCN1B-206ENST00000638536 NMRK2Q9NPI5 230 aa27.5■■□□□ 1.99
SCN1B-206ENST00000638536 ZC3H4Q9UPT8 1303 aaKnown RBP27.5■■□□□ 1.99
SCN1B-206ENST00000638536 CDC5LQ99459 802 aaKnown RBP27.49■■□□□ 1.99
SCN1B-206ENST00000638536 POLLQ9UGP5 575 aa27.49■■□□□ 1.99
SCN1B-206ENST00000638536 WTIPA6NIX2 430 aaPredicted RBP27.49■■□□□ 1.99
SCN1B-206ENST00000638536 CCT4P50991 539 aaKnown RBP27.49■■□□□ 1.99
SCN1B-206ENST00000638536 GPR101Q96P66 508 aaPredicted RBP27.49■■□□□ 1.99
SCN1B-206ENST00000638536 CHMP3Q9Y3E7 222 aa27.49■■□□□ 1.99
SCN1B-206ENST00000638536 GLTPD2A6NH11 291 aa27.48■■□□□ 1.99
SCN1B-206ENST00000638536 ATF7IPQ6VMQ6 1270 aa27.48■■□□□ 1.99
SCN1B-206ENST00000638536 CLUAP1Q96AJ1 413 aa27.48■■□□□ 1.99
SCN1B-206ENST00000638536 BICC1Q9H694 974 aaKnown RBP27.48■■□□□ 1.99
SCN1B-206ENST00000638536 PPIP5K2O43314 1243 aa27.47■■□□□ 1.99
SCN1B-206ENST00000638536 LARGE2Q8N3Y3 721 aa27.47■■□□□ 1.99
SCN1B-206ENST00000638536 BSDC1Q9NW68 430 aaPredicted RBP27.47■■□□□ 1.99
SCN1B-206ENST00000638536 ZNF541Q9H0D2 1346 aa27.47■■□□□ 1.99
SCN1B-206ENST00000638536 YTHDC1Q96MU7 727 aaKnown RBP27.46■■□□□ 1.99
SCN1B-206ENST00000638536 IPO8O15397 1037 aaKnown RBP27.45■■□□□ 1.99
SCN1B-206ENST00000638536 DDNO94850 711 aaPredicted RBP27.45■■□□□ 1.99
SCN1B-206ENST00000638536 ANKRD44Q8N8A2 993 aa27.45■■□□□ 1.99
SCN1B-206ENST00000638536 ZNF594Q96JF6 807 aaPredicted RBP27.45■■□□□ 1.99
SCN1B-206ENST00000638536 MINPP1Q9UNW1 487 aa27.45■■□□□ 1.99
SCN1B-206ENST00000638536 FZD9O00144 591 aa27.45■■□□□ 1.98
SCN1B-206ENST00000638536 KIF3CO14782 793 aa27.45■■□□□ 1.98
SCN1B-206ENST00000638536 INTS3Q68E01 1043 aaKnown RBP27.45■■□□□ 1.98
SCN1B-206ENST00000638536 TBC1D16Q8TBP0 767 aa27.45■■□□□ 1.98
SCN1B-206ENST00000638536 RRAGCQ9HB90 399 aa27.45■■□□□ 1.98
SCN1B-206ENST00000638536 ANKRD18BA2A2Z9 1011 aa27.44■■□□□ 1.98
SCN1B-206ENST00000638536 PODXL2Q9NZ53 605 aa27.44■■□□□ 1.98
SCN1B-206ENST00000638536 ANKIB1Q9P2G1 1089 aa27.44■■□□□ 1.98
SCN1B-206ENST00000638536 C6orf229H3BNL8 230 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms