RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 CELF1Q92879 486 aaKnown RBP27.7■■■□□ 2.02
SCN1B-206ENST00000638536 SEC31BQ9NQW1 1179 aa27.69■■■□□ 2.02
SCN1B-206ENST00000638536 DICER1Q9UPY3 1922 aaKnown RBP27.69■■■□□ 2.02
SCN1B-206ENST00000638536 PTPRCP08575 1304 aa27.68■■■□□ 2.02
SCN1B-206ENST00000638536 LMNB1P20700 586 aa27.67■■■□□ 2.02
SCN1B-206ENST00000638536 GRAPQ13588 217 aa27.67■■■□□ 2.02
SCN1B-206ENST00000638536 SOGA3Q5TF21 947 aa27.67■■■□□ 2.02
SCN1B-206ENST00000638536 GRAPLQ8TC17 118 aaPredicted RBP27.67■■■□□ 2.02
SCN1B-206ENST00000638536 TAOK3Q9H2K8 898 aa27.67■■■□□ 2.02
SCN1B-206ENST00000638536 NOB1Q9ULX3 412 aaKnown RBP27.67■■■□□ 2.02
SCN1B-206ENST00000638536 LTBP3Q9NS15 1303 aa27.66■■■□□ 2.02
SCN1B-206ENST00000638536 BCAR3O75815 825 aa27.65■■■□□ 2.02
SCN1B-206ENST00000638536 BRPF1P55201 1214 aaPredicted RBP27.65■■■□□ 2.02
SCN1B-206ENST00000638536 ZNF526Q8TF50 670 aaPredicted RBP27.65■■■□□ 2.02
SCN1B-206ENST00000638536 ATP6V0A2Q9Y487 856 aa27.65■■■□□ 2.02
SCN1B-206ENST00000638536 BBOX1O75936 387 aa27.64■■■□□ 2.02
SCN1B-206ENST00000638536 CTSWP56202 376 aa27.64■■■□□ 2.02
SCN1B-206ENST00000638536 TTLL11Q8NHH1 800 aa27.64■■■□□ 2.02
SCN1B-206ENST00000638536 SRCIN1Q9C0H9 1055 aa27.64■■■□□ 2.02
SCN1B-206ENST00000638536 FKBP4Q02790 459 aaKnown RBP eCLIP27.63■■■□□ 2.01
SCN1B-206ENST00000638536 RTKN2Q8IZC4 609 aa27.63■■■□□ 2.01
SCN1B-206ENST00000638536 ZNF277Q9NRM2 450 aaPredicted RBP27.63■■■□□ 2.01
SCN1B-206ENST00000638536 TIAM2Q8IVF5 1701 aa27.63■■■□□ 2.01
SCN1B-206ENST00000638536 ALDH1L1O75891 902 aa27.62■■■□□ 2.01
SCN1B-206ENST00000638536 HSP90B1P14625 803 aaKnown RBP27.62■■■□□ 2.01
SCN1B-206ENST00000638536 CCDC152Q4G0S7 254 aa27.62■■■□□ 2.01
SCN1B-206ENST00000638536 LRRC37AA6NMS7 1700 aa27.61■■■□□ 2.01
SCN1B-206ENST00000638536 GRM8O00222 908 aa27.61■■■□□ 2.01
SCN1B-206ENST00000638536 SP8Q8IXZ3 490 aa27.61■■■□□ 2.01
SCN1B-206ENST00000638536 PLA2G12BQ9BX93 195 aa27.61■■■□□ 2.01
SCN1B-206ENST00000638536 GREM2Q9H772 168 aa27.61■■■□□ 2.01
SCN1B-206ENST00000638536 SPEF2Q9C093 1822 aa27.61■■■□□ 2.01
SCN1B-206ENST00000638536 EPHA10Q5JZY3 1008 aa27.6■■■□□ 2.01
SCN1B-206ENST00000638536 CC2D2BQ6DHV5 1058 aa27.6■■■□□ 2.01
SCN1B-206ENST00000638536 RPS8P62241 208 aaKnown RBP27.59■■■□□ 2.01
SCN1B-206ENST00000638536 NBPF7P0C2Y1 421 aaPredicted RBP27.59■■■□□ 2.01
SCN1B-206ENST00000638536 FOXO4P98177 505 aa27.59■■■□□ 2.01
SCN1B-206ENST00000638536 PSMD1Q99460 953 aa27.59■■■□□ 2.01
SCN1B-206ENST00000638536 TNNQ9UQP3 1299 aa27.59■■■□□ 2.01
SCN1B-206ENST00000638536 COL4A5P29400 1685 aa27.58■■■□□ 2.01
SCN1B-206ENST00000638536 C9orf78Q9NZ63 289 aaPredicted RBP27.58■■■□□ 2.01
SCN1B-206ENST00000638536 CSF1RP07333 972 aa27.57■■■□□ 2
SCN1B-206ENST00000638536 KAZALD1Q96I82 304 aa27.56■■■□□ 2
SCN1B-206ENST00000638536 FAM161AQ3B820 660 aa27.56■■■□□ 2
SCN1B-206ENST00000638536 DUOX1Q9NRD9 1551 aa27.55■■■□□ 2
SCN1B-206ENST00000638536 IARSP41252 1262 aaKnown RBP27.55■■■□□ 2
SCN1B-206ENST00000638536 MPNDQ8N594 471 aa27.55■■■□□ 2
SCN1B-206ENST00000638536 SUCLG2Q96I99 432 aa27.55■■■□□ 2
SCN1B-206ENST00000638536 UTYO14607 1347 aa27.54■■■□□ 2
SCN1B-206ENST00000638536 USP44Q9H0E7 712 aa27.54■■■□□ 2
SCN1B-206ENST00000638536 LTBP1Q14766 1721 aa27.54■■■□□ 2
SCN1B-206ENST00000638536 KIF16BQ96L93 1317 aa27.54■■■□□ 2
SCN1B-206ENST00000638536 DPP8Q6V1X1 898 aaPredicted RBP27.53■■■□□ 2
SCN1B-206ENST00000638536 FRAT1Q92837 279 aaPredicted RBP27.53■■■□□ 2
SCN1B-206ENST00000638536 API5Q9BZZ5 524 aaKnown RBP27.53■■■□□ 2
SCN1B-206ENST00000638536 GPBP1L1Q9HC44 474 aaPredicted RBP27.53■■■□□ 2
SCN1B-206ENST00000638536 RTL9Q8NET4 1388 aa27.53■■■□□ 2
SCN1B-206ENST00000638536 ITGA6P23229 1130 aa27.52■■■□□ 2
SCN1B-206ENST00000638536 GPSM2P81274 684 aa27.52■■■□□ 2
SCN1B-206ENST00000638536 TMC4Q7Z404 712 aa27.52■■■□□ 2
SCN1B-206ENST00000638536 RTFDC1Q9BY42 306 aaPredicted RBP27.52■■■□□ 2
SCN1B-206ENST00000638536 TMX4Q9H1E5 349 aaPredicted RBP27.52■■■□□ 2
SCN1B-206ENST00000638536 GRIPAP1Q4V328 841 aa27.52■■■□□ 2
SCN1B-206ENST00000638536 LMBR1LQ6UX01 489 aa27.52■■■□□ 2
SCN1B-206ENST00000638536 ANKRD18AQ8IVF6 992 aa27.52■■■□□ 2
SCN1B-206ENST00000638536 ARHGAP45Q92619 1136 aa27.52■■■□□ 2
SCN1B-206ENST00000638536 TRIM27P14373 513 aa27.51■■□□□ 1.99
SCN1B-206ENST00000638536 NSFL1CQ9UNZ2 370 aaKnown RBP27.51■■□□□ 1.99
SCN1B-206ENST00000638536 AOC3Q16853 763 aa27.5■■□□□ 1.99
SCN1B-206ENST00000638536 NMRK2Q9NPI5 230 aa27.5■■□□□ 1.99
SCN1B-206ENST00000638536 ZC3H4Q9UPT8 1303 aaKnown RBP27.5■■□□□ 1.99
SCN1B-206ENST00000638536 CDC5LQ99459 802 aaKnown RBP27.49■■□□□ 1.99
SCN1B-206ENST00000638536 POLLQ9UGP5 575 aa27.49■■□□□ 1.99
SCN1B-206ENST00000638536 WTIPA6NIX2 430 aaPredicted RBP27.49■■□□□ 1.99
SCN1B-206ENST00000638536 CCT4P50991 539 aaKnown RBP27.49■■□□□ 1.99
SCN1B-206ENST00000638536 GPR101Q96P66 508 aaPredicted RBP27.49■■□□□ 1.99
SCN1B-206ENST00000638536 CHMP3Q9Y3E7 222 aa27.49■■□□□ 1.99
SCN1B-206ENST00000638536 GLTPD2A6NH11 291 aa27.48■■□□□ 1.99
SCN1B-206ENST00000638536 ATF7IPQ6VMQ6 1270 aa27.48■■□□□ 1.99
SCN1B-206ENST00000638536 CLUAP1Q96AJ1 413 aa27.48■■□□□ 1.99
SCN1B-206ENST00000638536 BICC1Q9H694 974 aaKnown RBP27.48■■□□□ 1.99
SCN1B-206ENST00000638536 PPIP5K2O43314 1243 aa27.47■■□□□ 1.99
SCN1B-206ENST00000638536 LARGE2Q8N3Y3 721 aa27.47■■□□□ 1.99
SCN1B-206ENST00000638536 BSDC1Q9NW68 430 aaPredicted RBP27.47■■□□□ 1.99
SCN1B-206ENST00000638536 ZNF541Q9H0D2 1346 aa27.47■■□□□ 1.99
SCN1B-206ENST00000638536 YTHDC1Q96MU7 727 aaKnown RBP27.46■■□□□ 1.99
SCN1B-206ENST00000638536 IPO8O15397 1037 aaKnown RBP27.45■■□□□ 1.99
SCN1B-206ENST00000638536 DDNO94850 711 aaPredicted RBP27.45■■□□□ 1.99
SCN1B-206ENST00000638536 ANKRD44Q8N8A2 993 aa27.45■■□□□ 1.99
SCN1B-206ENST00000638536 ZNF594Q96JF6 807 aaPredicted RBP27.45■■□□□ 1.99
SCN1B-206ENST00000638536 MINPP1Q9UNW1 487 aa27.45■■□□□ 1.99
SCN1B-206ENST00000638536 FZD9O00144 591 aa27.45■■□□□ 1.98
SCN1B-206ENST00000638536 KIF3CO14782 793 aa27.45■■□□□ 1.98
SCN1B-206ENST00000638536 INTS3Q68E01 1043 aaKnown RBP27.45■■□□□ 1.98
SCN1B-206ENST00000638536 TBC1D16Q8TBP0 767 aa27.45■■□□□ 1.98
SCN1B-206ENST00000638536 RRAGCQ9HB90 399 aa27.45■■□□□ 1.98
SCN1B-206ENST00000638536 ANKRD18BA2A2Z9 1011 aa27.44■■□□□ 1.98
SCN1B-206ENST00000638536 PODXL2Q9NZ53 605 aa27.44■■□□□ 1.98
SCN1B-206ENST00000638536 ANKIB1Q9P2G1 1089 aa27.44■■□□□ 1.98
SCN1B-206ENST00000638536 C6orf229H3BNL8 230 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms