RNA–Protein interactions for RNA: ENST00000637789.1

CHD2-229, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-229ENST00000637789 ZBTB12Q9Y330 459 aaPredicted RBP13.52□□□□□ -0.25
CHD2-229ENST00000637789 LAMB4A4D0S4 1761 aa13.52□□□□□ -0.25
CHD2-229ENST00000637789 PRAMEF22A3QJZ6 481 aa13.51□□□□□ -0.25
CHD2-229ENST00000637789 PPEF1O14829 653 aaPredicted RBP13.51□□□□□ -0.25
CHD2-229ENST00000637789 RNMTO43148 476 aaKnown RBP13.51□□□□□ -0.25
CHD2-229ENST00000637789 PLA2G5P39877 138 aa13.51□□□□□ -0.25
CHD2-229ENST00000637789 TNNT2P45379 298 aaPredicted RBP13.51□□□□□ -0.25
CHD2-229ENST00000637789 FKBP1BP68106 108 aa13.51□□□□□ -0.25
CHD2-229ENST00000637789 SLC4A8Q2Y0W8 1093 aa13.51□□□□□ -0.25
CHD2-229ENST00000637789 RBM26Q5T8P6 1007 aaKnown RBP13.51□□□□□ -0.25
CHD2-229ENST00000637789 NIP7Q9Y221 180 aaKnown RBP eCLIP13.51□□□□□ -0.25
CHD2-229ENST00000637789 ZNF609O15014 1411 aa13.5□□□□□ -0.25
CHD2-229ENST00000637789 ABCC12Q96J65 1359 aa13.5□□□□□ -0.25
CHD2-229ENST00000637789 WTIPA6NIX2 430 aaPredicted RBP13.5□□□□□ -0.25
CHD2-229ENST00000637789 HOXA10P31260 410 aaPredicted RBP13.5□□□□□ -0.25
CHD2-229ENST00000637789 SREBF2Q12772 1141 aa13.5□□□□□ -0.25
CHD2-229ENST00000637789 RPGRQ92834 1020 aaKnown RBP13.5□□□□□ -0.25
CHD2-229ENST00000637789 GGA3Q9NZ52 723 aa13.5□□□□□ -0.25
CHD2-229ENST00000637789 ZNF652Q9Y2D9 606 aa13.5□□□□□ -0.25
CHD2-229ENST00000637789 YDJCA8MPS7 323 aa13.49□□□□□ -0.25
CHD2-229ENST00000637789 UBE2Q2LH0YL09 131 aa13.49□□□□□ -0.25
CHD2-229ENST00000637789 GTF2E1P29083 439 aaPredicted RBP13.49□□□□□ -0.25
CHD2-229ENST00000637789 TTC5Q8N0Z6 440 aa13.49□□□□□ -0.25
CHD2-229ENST00000637789 CD99L2Q8TCZ2 262 aa13.49□□□□□ -0.25
CHD2-229ENST00000637789 DPF2Q92785 391 aa13.49□□□□□ -0.25
CHD2-229ENST00000637789 ZNF496Q96IT1 587 aaPredicted RBP13.49□□□□□ -0.25
CHD2-229ENST00000637789 CARD14Q9BXL6 1004 aa13.49□□□□□ -0.25
CHD2-229ENST00000637789 RIC1Q4ADV7 1423 aa13.48□□□□□ -0.25
CHD2-229ENST00000637789 HEG1Q9ULI3 1381 aa13.48□□□□□ -0.25
CHD2-229ENST00000637789 ASTN2O75129 1339 aaPredicted RBP13.48□□□□□ -0.25
CHD2-229ENST00000637789 KIF7Q2M1P5 1343 aa13.48□□□□□ -0.25
CHD2-229ENST00000637789 GPR153Q6NV75 609 aa13.48□□□□□ -0.25
CHD2-229ENST00000637789 ERO1AQ96HE7 468 aa13.48□□□□□ -0.25
CHD2-229ENST00000637789 TEX13AQ9BXU3 409 aaPredicted RBP13.48□□□□□ -0.25
CHD2-229ENST00000637789 MTMR10Q9NXD2 777 aa13.48□□□□□ -0.25
CHD2-229ENST00000637789 MYCP01106 439 aaPredicted RBP13.47□□□□□ -0.25
CHD2-229ENST00000637789 PIP4K2AP48426 406 aaPredicted RBP13.47□□□□□ -0.25
CHD2-229ENST00000637789 KIAA2012Q0VF49 1180 aa13.47□□□□□ -0.25
CHD2-229ENST00000637789 SUPT20HQ8NEM7 779 aa13.47□□□□□ -0.25
CHD2-229ENST00000637789 RTFDC1Q9BY42 306 aaPredicted RBP13.47□□□□□ -0.25
CHD2-229ENST00000637789 EFCC1Q9HA90 598 aa13.47□□□□□ -0.25
CHD2-229ENST00000637789 ALDH1A1P00352 501 aa13.46□□□□□ -0.25
CHD2-229ENST00000637789 CAP1Q01518 475 aa13.46□□□□□ -0.25
CHD2-229ENST00000637789 NUTM1Q86Y26 1132 aa13.46□□□□□ -0.25
CHD2-229ENST00000637789 FAM122AQ96E09 287 aa13.46□□□□□ -0.25
CHD2-229ENST00000637789 CRAMP1Q96RY5 1269 aa13.46□□□□□ -0.25
CHD2-229ENST00000637789 PSMD14O00487 310 aa13.45□□□□□ -0.26
CHD2-229ENST00000637789 ZBTB7BO15156 539 aaPredicted RBP13.45□□□□□ -0.26
CHD2-229ENST00000637789 HOXD11P31277 338 aaPredicted RBP13.45□□□□□ -0.26
CHD2-229ENST00000637789 KIF4BQ2VIQ3 1234 aa13.45□□□□□ -0.26
CHD2-229ENST00000637789 SLC9C1Q4G0N8 1177 aa13.45□□□□□ -0.26
CHD2-229ENST00000637789 SULT6B1Q6IMI4 303 aa13.45□□□□□ -0.26
CHD2-229ENST00000637789 NBPF11Q86T75 865 aa13.45□□□□□ -0.26
CHD2-229ENST00000637789 RBM17Q96I25 401 aaKnown RBP13.45□□□□□ -0.26
CHD2-229ENST00000637789 ATP6V0A2Q9Y487 856 aa13.45□□□□□ -0.26
CHD2-229ENST00000637789 TMX4Q9H1E5 349 aaPredicted RBP13.44□□□□□ -0.26
CHD2-229ENST00000637789 NR2E3Q9Y5X4 410 aa13.44□□□□□ -0.26
CHD2-229ENST00000637789 KDM3BQ7LBC6 1761 aa13.44□□□□□ -0.26
CHD2-229ENST00000637789 DPP8Q6V1X1 898 aaPredicted RBP13.43□□□□□ -0.26
CHD2-229ENST00000637789 SHISA4Q96DD7 197 aa13.43□□□□□ -0.26
CHD2-229ENST00000637789 SIN3AQ96ST3 1273 aa13.43□□□□□ -0.26
CHD2-229ENST00000637789 PTCH2Q9Y6C5 1203 aa13.43□□□□□ -0.26
CHD2-229ENST00000637789 ANGEL2Q5VTE6 544 aaKnown RBP13.42□□□□□ -0.26
CHD2-229ENST00000637789 ZNF790Q6PG37 636 aa13.42□□□□□ -0.26
CHD2-229ENST00000637789 HTATIP2Q9BUP3 242 aa13.42□□□□□ -0.26
CHD2-229ENST00000637789 STAP2Q9UGK3 403 aa13.42□□□□□ -0.26
CHD2-229ENST00000637789 SLC24A1O60721 1099 aa13.41□□□□□ -0.26
CHD2-229ENST00000637789 TTLL12Q14166 644 aaPredicted RBP13.41□□□□□ -0.26
CHD2-229ENST00000637789 HLFQ16534 295 aa13.41□□□□□ -0.26
CHD2-229ENST00000637789 IFNL1Q8IU54 200 aa13.41□□□□□ -0.26
CHD2-229ENST00000637789 RGL2O15211 777 aa13.4□□□□□ -0.26
CHD2-229ENST00000637789 RPS12P25398 132 aaKnown RBP13.4□□□□□ -0.26
CHD2-229ENST00000637789 C3orf67Q6ZVT6 689 aa13.4□□□□□ -0.26
CHD2-229ENST00000637789 NYXQ9GZU5 481 aa13.4□□□□□ -0.26
CHD2-229ENST00000637789 MUC3AQ02505 3323 aa13.4□□□□□ -0.26
CHD2-229ENST00000637789 IGF2BP3O00425 579 aaKnown RBP eCLIP13.39□□□□□ -0.27
CHD2-229ENST00000637789 SP3Q02447 781 aa13.39□□□□□ -0.27
CHD2-229ENST00000637789 SCARF1Q14162 830 aa13.39□□□□□ -0.27
CHD2-229ENST00000637789 PRAMEF18Q5VWM3 479 aa13.39□□□□□ -0.27
CHD2-229ENST00000637789 SPRYD7Q5W111 196 aa13.39□□□□□ -0.27
CHD2-229ENST00000637789 UBE2Q1Q7Z7E8 422 aa13.39□□□□□ -0.27
CHD2-229ENST00000637789 SH3TC2Q8TF17 1288 aa13.39□□□□□ -0.27
CHD2-229ENST00000637789 SCAF8Q9UPN6 1271 aaKnown RBP13.39□□□□□ -0.27
CHD2-229ENST00000637789 RPTORQ8N122 1335 aa13.39□□□□□ -0.27
CHD2-229ENST00000637789 EYSQ5T1H1 3165 aa13.38□□□□□ -0.27
CHD2-229ENST00000637789 PTPN12Q05209 780 aaKnown RBP13.38□□□□□ -0.27
CHD2-229ENST00000637789 CRHR2Q13324 411 aa13.38□□□□□ -0.27
CHD2-229ENST00000637789 TCIRG1Q13488 830 aa13.38□□□□□ -0.27
CHD2-229ENST00000637789 NEUROD1Q13562 356 aa13.38□□□□□ -0.27
CHD2-229ENST00000637789 FMNL2Q96PY5 1086 aa13.38□□□□□ -0.27
CHD2-229ENST00000637789 USP16Q9Y5T5 823 aa13.38□□□□□ -0.27
CHD2-229ENST00000637789 INHBEP58166 350 aa13.37□□□□□ -0.27
CHD2-229ENST00000637789 DBNDD1Q9H9R9 158 aa13.37□□□□□ -0.27
CHD2-229ENST00000637789 KCNQ5Q9NR82 932 aa13.37□□□□□ -0.27
CHD2-229ENST00000637789 DUOX1Q9NRD9 1551 aa13.37□□□□□ -0.27
CHD2-229ENST00000637789 RTL9Q8NET4 1388 aa13.36□□□□□ -0.27
CHD2-229ENST00000637789 MANSC4A6NHS7 340 aaPredicted RBP13.36□□□□□ -0.27
CHD2-229ENST00000637789 SP8Q8IXZ3 490 aa13.36□□□□□ -0.27
CHD2-229ENST00000637789 ABCC4O15439 1325 aa13.36□□□□□ -0.27
CHD2-229ENST00000637789 MTHFSDQ2M296 383 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 240.7 ms