RNA–Protein interactions for RNA: ENST00000637736.1

CACNA1A-246, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-246ENST00000637736 MSL1Q68DK7 614 aa21.69■■□□□ 1.06
CACNA1A-246ENST00000637736 DNAAF4Q8WXU2 420 aa21.69■■□□□ 1.06
CACNA1A-246ENST00000637736 STMN4Q9H169 189 aaPredicted RBP21.69■■□□□ 1.06
CACNA1A-246ENST00000637736 GAS8O95995 478 aa21.69■■□□□ 1.06
CACNA1A-246ENST00000637736 MPRIPQ6WCQ1 1025 aa21.69■■□□□ 1.06
CACNA1A-246ENST00000637736 FSIP1Q8NA03 581 aa21.69■■□□□ 1.06
CACNA1A-246ENST00000637736 FAM212AQ96EL1 285 aa21.69■■□□□ 1.06
CACNA1A-246ENST00000637736 ZC3H6P61129 1189 aaKnown RBP21.69■■□□□ 1.06
CACNA1A-246ENST00000637736 AQRO60306 1485 aaKnown RBP eCLIP21.69■■□□□ 1.06
CACNA1A-246ENST00000637736 XPCQ01831 940 aaPredicted RBP21.69■■□□□ 1.06
CACNA1A-246ENST00000637736 TIAM1Q13009 1591 aa21.68■■□□□ 1.06
CACNA1A-246ENST00000637736 TSPY2A6NKD2 308 aa21.68■■□□□ 1.06
CACNA1A-246ENST00000637736 GJC1P36383 396 aa21.68■■□□□ 1.06
CACNA1A-246ENST00000637736 CCDC117Q8IWD4 279 aaPredicted RBP21.68■■□□□ 1.06
CACNA1A-246ENST00000637736 HAUS7Q99871 368 aa21.68■■□□□ 1.06
CACNA1A-246ENST00000637736 MRVI1Q9Y6F6 885 aa21.68■■□□□ 1.06
CACNA1A-246ENST00000637736 CTAGE1Q96RT6 745 aa21.68■■□□□ 1.06
CACNA1A-246ENST00000637736 KIF5AQ12840 1032 aa21.68■■□□□ 1.06
CACNA1A-246ENST00000637736 ZGPATQ8N5A5 531 aaKnown RBP21.68■■□□□ 1.06
CACNA1A-246ENST00000637736 TEX13AQ9BXU3 409 aaPredicted RBP21.68■■□□□ 1.06
CACNA1A-246ENST00000637736 EEF2P13639 858 aaKnown RBP21.67■■□□□ 1.06
CACNA1A-246ENST00000637736 CCT6BQ92526 530 aa21.67■■□□□ 1.06
CACNA1A-246ENST00000637736 ZSWIM4Q9H7M6 989 aa21.67■■□□□ 1.06
CACNA1A-246ENST00000637736 GEN1Q17RS7 908 aa21.67■■□□□ 1.06
CACNA1A-246ENST00000637736 CFAP157Q5JU67 520 aa21.67■■□□□ 1.06
CACNA1A-246ENST00000637736 C16orf71Q8IYS4 520 aaPredicted RBP21.67■■□□□ 1.06
CACNA1A-246ENST00000637736 CRCPO75575 148 aa21.67■■□□□ 1.06
CACNA1A-246ENST00000637736 ITSN2Q9NZM3 1697 aa21.67■■□□□ 1.06
CACNA1A-246ENST00000637736 CAMSAP2Q08AD1 1489 aa21.67■■□□□ 1.06
CACNA1A-246ENST00000637736 CCDC50Q8IVM0 306 aa21.67■■□□□ 1.06
CACNA1A-246ENST00000637736 ATP2A1O14983 1001 aa21.66■■□□□ 1.06
CACNA1A-246ENST00000637736 NUDT16Q96DE0 195 aaKnown RBP21.66■■□□□ 1.06
CACNA1A-246ENST00000637736 SNW1Q13573 536 aaKnown RBP21.66■■□□□ 1.06
CACNA1A-246ENST00000637736 PPP1R42Q7Z4L9 355 aa21.66■■□□□ 1.06
CACNA1A-246ENST00000637736 HMG20BQ9P0W2 317 aa21.66■■□□□ 1.06
CACNA1A-246ENST00000637736 IMPG2Q9BZV3 1241 aa21.66■■□□□ 1.06
CACNA1A-246ENST00000637736 METAP2P50579 478 aaKnown RBP eCLIP21.65■■□□□ 1.06
CACNA1A-246ENST00000637736 PLS1Q14651 629 aa21.65■■□□□ 1.06
CACNA1A-246ENST00000637736 SIRT1Q96EB6 747 aa21.65■■□□□ 1.06
CACNA1A-246ENST00000637736 B4DLN1 442 aa21.65■■□□□ 1.06
CACNA1A-246ENST00000637736 MRPL12P52815 198 aaKnown RBP21.65■■□□□ 1.06
CACNA1A-246ENST00000637736 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.65■■□□□ 1.06
CACNA1A-246ENST00000637736 IARSP41252 1262 aaKnown RBP21.65■■□□□ 1.06
CACNA1A-246ENST00000637736 TRIM47Q96LD4 638 aa21.65■■□□□ 1.06
CACNA1A-246ENST00000637736 CRNKL1Q9BZJ0 848 aaKnown RBP21.65■■□□□ 1.06
CACNA1A-246ENST00000637736 CEP83Q9Y592 693 aa21.64■■□□□ 1.06
CACNA1A-246ENST00000637736 PANK2Q9BZ23 570 aa21.64■■□□□ 1.06
CACNA1A-246ENST00000637736 KIF3CO14782 793 aa21.64■■□□□ 1.05
CACNA1A-246ENST00000637736 BMP15O95972 392 aa21.64■■□□□ 1.05
CACNA1A-246ENST00000637736 NBPF7P0C2Y1 421 aaPredicted RBP21.64■■□□□ 1.05
CACNA1A-246ENST00000637736 KIAA1524Q8TCG1 905 aa21.64■■□□□ 1.05
CACNA1A-246ENST00000637736 CCDC77Q9BR77 488 aa21.64■■□□□ 1.05
CACNA1A-246ENST00000637736 IGF1RP08069 1367 aa21.64■■□□□ 1.05
CACNA1A-246ENST00000637736 DBF4Q9UBU7 674 aaPredicted RBP21.64■■□□□ 1.05
CACNA1A-246ENST00000637736 ATP2B3Q16720 1220 aa21.63■■□□□ 1.05
CACNA1A-246ENST00000637736 MAK16Q9BXY0 300 aaKnown RBP21.63■■□□□ 1.05
CACNA1A-246ENST00000637736 PLCB3Q01970 1234 aa21.63■■□□□ 1.05
CACNA1A-246ENST00000637736 ZSCAN16Q9H4T2 348 aaPredicted RBP21.63■■□□□ 1.05
CACNA1A-246ENST00000637736 PAXBP1Q9Y5B6 917 aa21.63■■□□□ 1.05
CACNA1A-246ENST00000637736 ZNF622Q969S3 477 aaKnown RBP eCLIP21.63■■□□□ 1.05
CACNA1A-246ENST00000637736 ECM2O94769 699 aaPredicted RBP21.63■■□□□ 1.05
CACNA1A-246ENST00000637736 FAM169AQ9Y6X4 670 aa21.63■■□□□ 1.05
CACNA1A-246ENST00000637736 CLEC11AQ9Y240 323 aa21.63■■□□□ 1.05
CACNA1A-246ENST00000637736 STAT6P42226 847 aa21.63■■□□□ 1.05
CACNA1A-246ENST00000637736 FEZ2Q9UHY8 353 aaPredicted RBP21.63■■□□□ 1.05
CACNA1A-246ENST00000637736 MIS18AQ9NYP9 233 aa21.62■■□□□ 1.05
CACNA1A-246ENST00000637736 TRIM7Q9C029 511 aa21.62■■□□□ 1.05
CACNA1A-246ENST00000637736 CLGNO14967 610 aa21.62■■□□□ 1.05
CACNA1A-246ENST00000637736 BIRC2Q13490 618 aa21.62■■□□□ 1.05
CACNA1A-246ENST00000637736 NCOA7Q8NI08 942 aa21.62■■□□□ 1.05
CACNA1A-246ENST00000637736 NBPF1Q3BBV0 1214 aa21.62■■□□□ 1.05
CACNA1A-246ENST00000637736 MCM10Q7L590 875 aa21.62■■□□□ 1.05
CACNA1A-246ENST00000637736 SELENOSQ9BQE4 189 aa21.62■■□□□ 1.05
CACNA1A-246ENST00000637736 TCHPQ9BT92 498 aa21.62■■□□□ 1.05
CACNA1A-246ENST00000637736 CCDC102BQ68D86 513 aa21.61■■□□□ 1.05
CACNA1A-246ENST00000637736 RFX1P22670 979 aa21.61■■□□□ 1.05
CACNA1A-246ENST00000637736 TSPY3P0CV98 308 aa21.61■■□□□ 1.05
CACNA1A-246ENST00000637736 TSPY8P0CW00 308 aa21.61■■□□□ 1.05
CACNA1A-246ENST00000637736 RFC4P35249 363 aa21.6■■□□□ 1.05
CACNA1A-246ENST00000637736 TMCO4Q5TGY1 634 aa21.6■■□□□ 1.05
CACNA1A-246ENST00000637736 KRT23Q9C075 422 aa21.6■■□□□ 1.05
CACNA1A-246ENST00000637736 MSANTD4Q8NCY6 345 aa21.6■■□□□ 1.05
CACNA1A-246ENST00000637736 AKR1B10O60218 316 aa21.6■■□□□ 1.05
CACNA1A-246ENST00000637736 SPAG5Q96R06 1193 aa21.6■■□□□ 1.05
CACNA1A-246ENST00000637736 RNF216Q9NWF9 866 aaPredicted RBP21.6■■□□□ 1.05
CACNA1A-246ENST00000637736 WDR97A6NE52 1622 aa21.6■■□□□ 1.05
CACNA1A-246ENST00000637736 CYLC1P35663 651 aaPredicted RBP21.6■■□□□ 1.05
CACNA1A-246ENST00000637736 PROCA1Q8NCQ7 364 aaPredicted RBP21.6■■□□□ 1.05
CACNA1A-246ENST00000637736 MCM5P33992 734 aa21.59■■□□□ 1.05
CACNA1A-246ENST00000637736 UBE2HP62256 183 aa21.59■■□□□ 1.05
CACNA1A-246ENST00000637736 ATRIPQ8WXE1 791 aa21.59■■□□□ 1.05
CACNA1A-246ENST00000637736 MRC2Q9UBG0 1479 aa21.59■■□□□ 1.05
CACNA1A-246ENST00000637736 TMTC2Q8N394 836 aa21.59■■□□□ 1.05
CACNA1A-246ENST00000637736 TTC14Q96N46 770 aa21.59■■□□□ 1.05
CACNA1A-246ENST00000637736 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.59■■□□□ 1.05
CACNA1A-246ENST00000637736 GTF2A1P52655 376 aaPredicted RBP21.59■■□□□ 1.05
CACNA1A-246ENST00000637736 ATP2A2P16615 1042 aaKnown RBP21.59■■□□□ 1.05
CACNA1A-246ENST00000637736 GNG11P61952 73 aa21.59■■□□□ 1.05
CACNA1A-246ENST00000637736 IFIT1BQ5T764 474 aaKnown RBP21.59■■□□□ 1.05
CACNA1A-246ENST00000637736 N4BP3O15049 544 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms