RNA–Protein interactions for RNA: ENST00000633371.1

PHACTR4-209, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 3

Gene PHACTR4, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-209ENST00000633371 NOP58Q9Y2X3 529 aaKnown RBP17.72■□□□□ 0.43
PHACTR4-209ENST00000633371 HMMRO75330 724 aa17.71■□□□□ 0.43
PHACTR4-209ENST00000633371 MMP10P09238 476 aa17.71■□□□□ 0.43
PHACTR4-209ENST00000633371 PTPN12Q05209 780 aaKnown RBP17.71■□□□□ 0.43
PHACTR4-209ENST00000633371 FAM161AQ3B820 660 aa17.71■□□□□ 0.43
PHACTR4-209ENST00000633371 TPTE2Q6XPS3 522 aa17.71■□□□□ 0.43
PHACTR4-209ENST00000633371 CCDC85AQ96PX6 553 aaPredicted RBP17.71■□□□□ 0.43
PHACTR4-209ENST00000633371 GREM2Q9H772 168 aa17.7■□□□□ 0.42
PHACTR4-209ENST00000633371 PDZRN3Q9UPQ7 1066 aa17.7■□□□□ 0.42
PHACTR4-209ENST00000633371 EXOC6BQ9Y2D4 811 aa17.7■□□□□ 0.42
PHACTR4-209ENST00000633371 RIC1Q4ADV7 1423 aa17.7■□□□□ 0.42
PHACTR4-209ENST00000633371 R3HDM1Q15032 1099 aaKnown RBP17.69■□□□□ 0.42
PHACTR4-209ENST00000633371 SF3B3Q15393 1217 aaKnown RBP17.69■□□□□ 0.42
PHACTR4-209ENST00000633371 ZNF594Q96JF6 807 aaPredicted RBP17.69■□□□□ 0.42
PHACTR4-209ENST00000633371 COPRSQ9NQ92 184 aa17.69■□□□□ 0.42
PHACTR4-209ENST00000633371 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.69■□□□□ 0.42
PHACTR4-209ENST00000633371 RTL9Q8NET4 1388 aa17.68■□□□□ 0.42
PHACTR4-209ENST00000633371 CNBD1Q8NA66 436 aa17.68■□□□□ 0.42
PHACTR4-209ENST00000633371 SLC16A10Q8TF71 515 aa17.68■□□□□ 0.42
PHACTR4-209ENST00000633371 GCC1Q96CN9 775 aa17.68■□□□□ 0.42
PHACTR4-209ENST00000633371 A0A1B0GUL6 1792 aa17.68■□□□□ 0.42
PHACTR4-209ENST00000633371 LRP5O75197 1615 aa17.68■□□□□ 0.42
PHACTR4-209ENST00000633371 COL11A2P13942 1736 aaPredicted RBP17.67■□□□□ 0.42
PHACTR4-209ENST00000633371 SURF6O75683 361 aaKnown RBP17.67■□□□□ 0.42
PHACTR4-209ENST00000633371 NUCB1Q02818 461 aa17.67■□□□□ 0.42
PHACTR4-209ENST00000633371 SEC31BQ9NQW1 1179 aa17.67■□□□□ 0.42
PHACTR4-209ENST00000633371 CHMP3Q9Y3E7 222 aa17.67■□□□□ 0.42
PHACTR4-209ENST00000633371 SMARCA5O60264 1052 aaPredicted RBP17.66■□□□□ 0.42
PHACTR4-209ENST00000633371 SASH1O94885 1247 aa17.66■□□□□ 0.42
PHACTR4-209ENST00000633371 ITGA6P23229 1130 aa17.66■□□□□ 0.42
PHACTR4-209ENST00000633371 PDE4AP27815 886 aa17.66■□□□□ 0.42
PHACTR4-209ENST00000633371 GTF2E1P29083 439 aaPredicted RBP17.66■□□□□ 0.42
PHACTR4-209ENST00000633371 ATG9AQ7Z3C6 839 aa17.66■□□□□ 0.42
PHACTR4-209ENST00000633371 PUS3Q9BZE2 481 aaKnown RBP17.66■□□□□ 0.42
PHACTR4-209ENST00000633371 KIF13BQ9NQT8 1826 aa17.65■□□□□ 0.42
PHACTR4-209ENST00000633371 KLRG2A4D1S0 409 aaPredicted RBP17.65■□□□□ 0.42
PHACTR4-209ENST00000633371 PSDA5PKW4 1024 aaPredicted RBP17.65■□□□□ 0.42
PHACTR4-209ENST00000633371 PARP3Q9Y6F1 533 aa17.65■□□□□ 0.42
PHACTR4-209ENST00000633371 APBB1O00213 710 aa17.64■□□□□ 0.41
PHACTR4-209ENST00000633371 LRRC24Q50LG9 513 aa17.64■□□□□ 0.41
PHACTR4-209ENST00000633371 ANKRD45Q5TZF3 282 aa17.64■□□□□ 0.41
PHACTR4-209ENST00000633371 NLRP3Q96P20 1036 aa17.64■□□□□ 0.41
PHACTR4-209ENST00000633371 SIL1Q9H173 461 aa17.64■□□□□ 0.41
PHACTR4-209ENST00000633371 ZBTB7AO95365 584 aa17.63■□□□□ 0.41
PHACTR4-209ENST00000633371 HSP90B1P14625 803 aaKnown RBP17.63■□□□□ 0.41
PHACTR4-209ENST00000633371 IFIT5Q13325 482 aaKnown RBP17.63■□□□□ 0.41
PHACTR4-209ENST00000633371 CCDC57Q2TAC2 916 aa17.63■□□□□ 0.41
PHACTR4-209ENST00000633371 CRY2Q49AN0 593 aa17.63■□□□□ 0.41
PHACTR4-209ENST00000633371 CCDC152Q4G0S7 254 aa17.63■□□□□ 0.41
PHACTR4-209ENST00000633371 CHD1LQ86WJ1 897 aa17.63■□□□□ 0.41
PHACTR4-209ENST00000633371 C16orf71Q8IYS4 520 aaPredicted RBP17.63■□□□□ 0.41
PHACTR4-209ENST00000633371 KIAA1551Q9HCM1 1747 aa17.62■□□□□ 0.41
PHACTR4-209ENST00000633371 ANKRD18BA2A2Z9 1011 aa17.62■□□□□ 0.41
PHACTR4-209ENST00000633371 EYA2O00167 538 aa17.62■□□□□ 0.41
PHACTR4-209ENST00000633371 RAB11FIP3O75154 756 aa17.62■□□□□ 0.41
PHACTR4-209ENST00000633371 ST5P78524 1137 aa17.62■□□□□ 0.41
PHACTR4-209ENST00000633371 RHPN1Q8TCX5 695 aa17.62■□□□□ 0.41
PHACTR4-209ENST00000633371 SGIP1Q9BQI5 828 aa17.62■□□□□ 0.41
PHACTR4-209ENST00000633371 LNPKQ9C0E8 428 aa17.62■□□□□ 0.41
PHACTR4-209ENST00000633371 RIPOR2Q9Y4F9 1068 aa17.62■□□□□ 0.41
PHACTR4-209ENST00000633371 CACNA1SQ13698 1873 aa17.61■□□□□ 0.41
PHACTR4-209ENST00000633371 OTUD7AQ8TE49 926 aaPredicted RBP17.61■□□□□ 0.41
PHACTR4-209ENST00000633371 CELF1Q92879 486 aaKnown RBP17.61■□□□□ 0.41
PHACTR4-209ENST00000633371 BRIP1Q9BX63 1249 aa17.61■□□□□ 0.41
PHACTR4-209ENST00000633371 ATF5Q9Y2D1 282 aaPredicted RBP17.61■□□□□ 0.41
PHACTR4-209ENST00000633371 CIAO1O76071 339 aa17.6■□□□□ 0.41
PHACTR4-209ENST00000633371 G3BP1Q13283 466 aaKnown RBP eCLIP17.6■□□□□ 0.41
PHACTR4-209ENST00000633371 SLC51AQ86UW1 340 aa17.6■□□□□ 0.41
PHACTR4-209ENST00000633371 MTFR1LQ9H019 292 aa17.6■□□□□ 0.41
PHACTR4-209ENST00000633371 DLEC1Q9Y238 1755 aa17.59■□□□□ 0.41
PHACTR4-209ENST00000633371 C10orf71Q711Q0 1435 aa17.59■□□□□ 0.41
PHACTR4-209ENST00000633371 SALL3Q9BXA9 1300 aa17.59■□□□□ 0.41
PHACTR4-209ENST00000633371 NPHP1O15259 732 aa17.59■□□□□ 0.41
PHACTR4-209ENST00000633371 HOXA10P31260 410 aaPredicted RBP17.59■□□□□ 0.41
PHACTR4-209ENST00000633371 TFCP2Q12800 502 aa17.59■□□□□ 0.41
PHACTR4-209ENST00000633371 HSP90AB4PQ58FF6 505 aa17.59■□□□□ 0.41
PHACTR4-209ENST00000633371 KIF1BPQ96EK5 621 aa17.59■□□□□ 0.41
PHACTR4-209ENST00000633371 LRRCC1Q9C099 1032 aa17.59■□□□□ 0.41
PHACTR4-209ENST00000633371 IL1RAPL2Q9NP60 686 aa17.59■□□□□ 0.41
PHACTR4-209ENST00000633371 FBXO3Q9UK99 471 aa17.58■□□□□ 0.4
PHACTR4-209ENST00000633371 SLX4Q8IY92 1834 aa17.57■□□□□ 0.4
PHACTR4-209ENST00000633371 IL15P40933 162 aaPredicted RBP17.57■□□□□ 0.4
PHACTR4-209ENST00000633371 PTGER2P43116 358 aa17.57■□□□□ 0.4
PHACTR4-209ENST00000633371 LDHAL6AQ6ZMR3 332 aa17.57■□□□□ 0.4
PHACTR4-209ENST00000633371 VGLL2Q8N8G2 317 aa17.57■□□□□ 0.4
PHACTR4-209ENST00000633371 LRRC37AA6NMS7 1700 aa17.56■□□□□ 0.4
PHACTR4-209ENST00000633371 SRGNP10124 158 aa17.56■□□□□ 0.4
PHACTR4-209ENST00000633371 RPS8P62241 208 aaKnown RBP17.56■□□□□ 0.4
PHACTR4-209ENST00000633371 OS9Q13438 667 aaPredicted RBP17.56■□□□□ 0.4
PHACTR4-209ENST00000633371 TAF7LQ5H9L4 462 aa17.56■□□□□ 0.4
PHACTR4-209ENST00000633371 ERC1Q8IUD2 1116 aa17.56■□□□□ 0.4
PHACTR4-209ENST00000633371 PLEKHM2Q8IWE5 1019 aa17.56■□□□□ 0.4
PHACTR4-209ENST00000633371 EAF2Q96CJ1 260 aaPredicted RBP17.56■□□□□ 0.4
PHACTR4-209ENST00000633371 ARAP2Q8WZ64 1704 aa17.55■□□□□ 0.4
PHACTR4-209ENST00000633371 RGS3P49796 1198 aa17.55■□□□□ 0.4
PHACTR4-209ENST00000633371 GRAPQ13588 217 aa17.55■□□□□ 0.4
PHACTR4-209ENST00000633371 DDX46Q7L014 1031 aaKnown RBP17.55■□□□□ 0.4
PHACTR4-209ENST00000633371 ANKRD18AQ8IVF6 992 aa17.55■□□□□ 0.4
PHACTR4-209ENST00000633371 GRAPLQ8TC17 118 aaPredicted RBP17.55■□□□□ 0.4
PHACTR4-209ENST00000633371 CRAMP1Q96RY5 1269 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms