RNA–Protein interactions for RNA: ENST00000630539.1

CLPTM1L-216, Transcript of CLPTM1 like, humanhuman

TSL 5 BASIC

Gene CLPTM1L, Length 2,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1L-216ENST00000630539 FAM161AQ3B820 660 aa20.38■□□□□ 0.85
CLPTM1L-216ENST00000630539 SSH3Q8TE77 659 aa20.38■□□□□ 0.85
CLPTM1L-216ENST00000630539 TTLL11Q8NHH1 800 aa20.37■□□□□ 0.85
CLPTM1L-216ENST00000630539 PA2G4Q9UQ80 394 aaKnown RBP20.37■□□□□ 0.85
CLPTM1L-216ENST00000630539 HMMRO75330 724 aa20.37■□□□□ 0.85
CLPTM1L-216ENST00000630539 POLA2Q14181 598 aa20.37■□□□□ 0.85
CLPTM1L-216ENST00000630539 GREM2Q9H772 168 aa20.37■□□□□ 0.85
CLPTM1L-216ENST00000630539 EXOC6BQ9Y2D4 811 aa20.37■□□□□ 0.85
CLPTM1L-216ENST00000630539 APBB1O00213 710 aa20.36■□□□□ 0.85
CLPTM1L-216ENST00000630539 CSF1RP07333 972 aa20.36■□□□□ 0.85
CLPTM1L-216ENST00000630539 PARP3Q9Y6F1 533 aa20.36■□□□□ 0.85
CLPTM1L-216ENST00000630539 NRXN2Q9P2S2 1712 aa20.36■□□□□ 0.85
CLPTM1L-216ENST00000630539 CENPQQ7L2Z9 268 aaPredicted RBP20.35■□□□□ 0.85
CLPTM1L-216ENST00000630539 SLC10A5Q5PT55 438 aa20.34■□□□□ 0.85
CLPTM1L-216ENST00000630539 SKAP1Q86WV1 359 aa20.34■□□□□ 0.85
CLPTM1L-216ENST00000630539 ZNF594Q96JF6 807 aaPredicted RBP20.34■□□□□ 0.85
CLPTM1L-216ENST00000630539 BCL11AQ9H165 835 aa20.34■□□□□ 0.85
CLPTM1L-216ENST00000630539 SIL1Q9H173 461 aa20.34■□□□□ 0.85
CLPTM1L-216ENST00000630539 RFX5P48382 616 aaPredicted RBP20.34■□□□□ 0.85
CLPTM1L-216ENST00000630539 ST5P78524 1137 aa20.34■□□□□ 0.85
CLPTM1L-216ENST00000630539 SLC16A10Q8TF71 515 aa20.34■□□□□ 0.85
CLPTM1L-216ENST00000630539 COL4A1P02462 1669 aa20.34■□□□□ 0.85
CLPTM1L-216ENST00000630539 SURF6O75683 361 aaKnown RBP20.33■□□□□ 0.85
CLPTM1L-216ENST00000630539 ITGA6P23229 1130 aa20.33■□□□□ 0.85
CLPTM1L-216ENST00000630539 DCTPP1Q9H773 170 aa20.33■□□□□ 0.85
CLPTM1L-216ENST00000630539 ATF5Q9Y2D1 282 aaPredicted RBP20.33■□□□□ 0.85
CLPTM1L-216ENST00000630539 PTPN12Q05209 780 aaKnown RBP20.32■□□□□ 0.84
CLPTM1L-216ENST00000630539 CCDC57Q2TAC2 916 aa20.32■□□□□ 0.84
CLPTM1L-216ENST00000630539 SMC5Q8IY18 1101 aa20.32■□□□□ 0.84
CLPTM1L-216ENST00000630539 NLRP3Q96P20 1036 aa20.32■□□□□ 0.84
CLPTM1L-216ENST00000630539 SEC31BQ9NQW1 1179 aa20.32■□□□□ 0.84
CLPTM1L-216ENST00000630539 TAF1P21675 1872 aa20.32■□□□□ 0.84
CLPTM1L-216ENST00000630539 ANKRD31Q8N7Z5 1873 aa20.32■□□□□ 0.84
CLPTM1L-216ENST00000630539 HSP90B1P14625 803 aaKnown RBP20.31■□□□□ 0.84
CLPTM1L-216ENST00000630539 IFIT5Q13325 482 aaKnown RBP20.31■□□□□ 0.84
CLPTM1L-216ENST00000630539 CCDC152Q4G0S7 254 aa20.31■□□□□ 0.84
CLPTM1L-216ENST00000630539 ERICH6Q7L0X2 663 aa20.3■□□□□ 0.84
CLPTM1L-216ENST00000630539 GCC1Q96CN9 775 aa20.3■□□□□ 0.84
CLPTM1L-216ENST00000630539 MTFR1LQ9H019 292 aa20.3■□□□□ 0.84
CLPTM1L-216ENST00000630539 SF3B3Q15393 1217 aaKnown RBP20.29■□□□□ 0.84
CLPTM1L-216ENST00000630539 SPEF2Q9C093 1822 aa20.29■□□□□ 0.84
CLPTM1L-216ENST00000630539 COPRSQ9NQ92 184 aa20.29■□□□□ 0.84
CLPTM1L-216ENST00000630539 ANKRD18BA2A2Z9 1011 aa20.28■□□□□ 0.84
CLPTM1L-216ENST00000630539 ANKRD45Q5TZF3 282 aa20.28■□□□□ 0.84
CLPTM1L-216ENST00000630539 PUS3Q9BZE2 481 aaKnown RBP20.28■□□□□ 0.84
CLPTM1L-216ENST00000630539 SMARCA5O60264 1052 aaPredicted RBP20.27■□□□□ 0.84
CLPTM1L-216ENST00000630539 OS9Q13438 667 aaPredicted RBP20.27■□□□□ 0.84
CLPTM1L-216ENST00000630539 LRRC24Q50LG9 513 aa20.27■□□□□ 0.84
CLPTM1L-216ENST00000630539 TAF7LQ5H9L4 462 aa20.27■□□□□ 0.84
CLPTM1L-216ENST00000630539 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.27■□□□□ 0.84
CLPTM1L-216ENST00000630539 RIC1Q4ADV7 1423 aa20.27■□□□□ 0.84
CLPTM1L-216ENST00000630539 PDZRN3Q9UPQ7 1066 aa20.27■□□□□ 0.84
CLPTM1L-216ENST00000630539 NOP58Q9Y2X3 529 aaKnown RBP20.27■□□□□ 0.84
CLPTM1L-216ENST00000630539 UTRNP46939 3433 aa20.26■□□□□ 0.83
CLPTM1L-216ENST00000630539 BRIP1Q9BX63 1249 aa20.26■□□□□ 0.83
CLPTM1L-216ENST00000630539 LNPKQ9C0E8 428 aa20.26■□□□□ 0.83
CLPTM1L-216ENST00000630539 COL11A2P13942 1736 aaPredicted RBP20.26■□□□□ 0.83
CLPTM1L-216ENST00000630539 CRY2Q49AN0 593 aa20.26■□□□□ 0.83
CLPTM1L-216ENST00000630539 CELF1Q92879 486 aaKnown RBP20.26■□□□□ 0.83
CLPTM1L-216ENST00000630539 RTL9Q8NET4 1388 aa20.25■□□□□ 0.83
CLPTM1L-216ENST00000630539 G3BP1Q13283 466 aaKnown RBP eCLIP20.25■□□□□ 0.83
CLPTM1L-216ENST00000630539 IL1RAPL2Q9NP60 686 aa20.25■□□□□ 0.83
CLPTM1L-216ENST00000630539 SASH1O94885 1247 aa20.24■□□□□ 0.83
CLPTM1L-216ENST00000630539 ANP32AP39687 249 aaKnown RBP20.24■□□□□ 0.83
CLPTM1L-216ENST00000630539 NUCB1Q02818 461 aa20.24■□□□□ 0.83
CLPTM1L-216ENST00000630539 LDHAL6AQ6ZMR3 332 aa20.24■□□□□ 0.83
CLPTM1L-216ENST00000630539 ATG9AQ7Z3C6 839 aa20.24■□□□□ 0.83
CLPTM1L-216ENST00000630539 LRP5O75197 1615 aa20.24■□□□□ 0.83
CLPTM1L-216ENST00000630539 SLC51AQ86UW1 340 aa20.24■□□□□ 0.83
CLPTM1L-216ENST00000630539 RPGRQ92834 1020 aaKnown RBP20.24■□□□□ 0.83
CLPTM1L-216ENST00000630539 LRRCC1Q9C099 1032 aa20.24■□□□□ 0.83
CLPTM1L-216ENST00000630539 EYA2O00167 538 aa20.23■□□□□ 0.83
CLPTM1L-216ENST00000630539 DDX46Q7L014 1031 aaKnown RBP20.23■□□□□ 0.83
CLPTM1L-216ENST00000630539 CHD1LQ86WJ1 897 aa20.23■□□□□ 0.83
CLPTM1L-216ENST00000630539 RHPN1Q8TCX5 695 aa20.23■□□□□ 0.83
CLPTM1L-216ENST00000630539 IPO9Q96P70 1041 aaKnown RBP20.23■□□□□ 0.83
CLPTM1L-216ENST00000630539 KLRG2A4D1S0 409 aaPredicted RBP20.22■□□□□ 0.83
CLPTM1L-216ENST00000630539 PDE4AP27815 886 aa20.22■□□□□ 0.83
CLPTM1L-216ENST00000630539 POLD1P28340 1107 aa20.22■□□□□ 0.83
CLPTM1L-216ENST00000630539 SGIP1Q9BQI5 828 aa20.22■□□□□ 0.83
CLPTM1L-216ENST00000630539 CNNM1Q9NRU3 951 aa20.22■□□□□ 0.83
CLPTM1L-216ENST00000630539 C10orf71Q711Q0 1435 aa20.22■□□□□ 0.83
CLPTM1L-216ENST00000630539 PTGER2P43116 358 aa20.22■□□□□ 0.83
CLPTM1L-216ENST00000630539 CDC5LQ99459 802 aaKnown RBP20.22■□□□□ 0.83
CLPTM1L-216ENST00000630539 MPHOSPH8Q99549 860 aa20.22■□□□□ 0.83
CLPTM1L-216ENST00000630539 BACH2Q9BYV9 841 aa20.22■□□□□ 0.83
CLPTM1L-216ENST00000630539 RAB11FIP3O75154 756 aa20.21■□□□□ 0.83
CLPTM1L-216ENST00000630539 SRGNP10124 158 aa20.21■□□□□ 0.83
CLPTM1L-216ENST00000630539 CHRNA5P30532 468 aa20.21■□□□□ 0.83
CLPTM1L-216ENST00000630539 PDE6BP35913 854 aa20.21■□□□□ 0.83
CLPTM1L-216ENST00000630539 IGHMBP2P38935 993 aaKnown RBP20.21■□□□□ 0.83
CLPTM1L-216ENST00000630539 TFCP2Q12800 502 aa20.21■□□□□ 0.83
CLPTM1L-216ENST00000630539 HSP90AB4PQ58FF6 505 aa20.21■□□□□ 0.83
CLPTM1L-216ENST00000630539 C16orf71Q8IYS4 520 aaPredicted RBP20.21■□□□□ 0.83
CLPTM1L-216ENST00000630539 KIF1BPQ96EK5 621 aa20.21■□□□□ 0.83
CLPTM1L-216ENST00000630539 RGS3P49796 1198 aa20.2■□□□□ 0.83
CLPTM1L-216ENST00000630539 ANKRD18AQ8IVF6 992 aa20.2■□□□□ 0.83
CLPTM1L-216ENST00000630539 OTUD7AQ8TE49 926 aaPredicted RBP20.2■□□□□ 0.82
CLPTM1L-216ENST00000630539 RIPOR2Q9Y4F9 1068 aa20.2■□□□□ 0.82
CLPTM1L-216ENST00000630539 CIAO1O76071 339 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms