RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 SP8Q8IXZ3 490 aa21.52■■□□□ 1.04
PDCD6-214ENST00000628729 C8orf58Q8NAV2 365 aa21.52■■□□□ 1.04
PDCD6-214ENST00000628729 BBOX1O75936 387 aa21.51■■□□□ 1.03
PDCD6-214ENST00000628729 DDX46Q7L014 1031 aaKnown RBP21.51■■□□□ 1.03
PDCD6-214ENST00000628729 PNMA8AQ86V59 439 aaPredicted RBP21.51■■□□□ 1.03
PDCD6-214ENST00000628729 GNAI1P63096 354 aa21.5■■□□□ 1.03
PDCD6-214ENST00000628729 RTL5Q5HYW3 569 aaPredicted RBP21.5■■□□□ 1.03
PDCD6-214ENST00000628729 DPP8Q6V1X1 898 aaPredicted RBP21.5■■□□□ 1.03
PDCD6-214ENST00000628729 CELF1Q92879 486 aaKnown RBP21.5■■□□□ 1.03
PDCD6-214ENST00000628729 CLEC11AQ9Y240 323 aa21.5■■□□□ 1.03
PDCD6-214ENST00000628729 FMR1Q06787 632 aaKnown RBP eCLIP21.49■■□□□ 1.03
PDCD6-214ENST00000628729 CXCL9Q07325 125 aa21.49■■□□□ 1.03
PDCD6-214ENST00000628729 KIAA2012Q0VF49 1180 aa21.49■■□□□ 1.03
PDCD6-214ENST00000628729 CNTROBQ8N137 903 aa21.49■■□□□ 1.03
PDCD6-214ENST00000628729 MPNDQ8N594 471 aa21.49■■□□□ 1.03
PDCD6-214ENST00000628729 TSPYL6Q8N831 410 aa21.49■■□□□ 1.03
PDCD6-214ENST00000628729 TRIM28Q13263 835 aaKnown RBP21.48■■□□□ 1.03
PDCD6-214ENST00000628729 SF3B3Q15393 1217 aaKnown RBP21.48■■□□□ 1.03
PDCD6-214ENST00000628729 VPS33BQ9H267 617 aa21.48■■□□□ 1.03
PDCD6-214ENST00000628729 TMEM88BA6NKF7 163 aa21.47■■□□□ 1.03
PDCD6-214ENST00000628729 YDJCA8MPS7 323 aa21.47■■□□□ 1.03
PDCD6-214ENST00000628729 LMOD1P29536 600 aaPredicted RBP21.47■■□□□ 1.03
PDCD6-214ENST00000628729 SUPT20HQ8NEM7 779 aa21.47■■□□□ 1.03
PDCD6-214ENST00000628729 ZNRF3Q9ULT6 936 aa21.47■■□□□ 1.03
PDCD6-214ENST00000628729 THSD7BQ9C0I4 1608 aa21.47■■□□□ 1.03
PDCD6-214ENST00000628729 CALD1Q05682 793 aaKnown RBP21.46■■□□□ 1.03
PDCD6-214ENST00000628729 TSR2Q969E8 191 aaKnown RBP21.46■■□□□ 1.03
PDCD6-214ENST00000628729 TMX4Q9H1E5 349 aaPredicted RBP21.46■■□□□ 1.03
PDCD6-214ENST00000628729 GPRC5DQ9NZD1 345 aa21.46■■□□□ 1.03
PDCD6-214ENST00000628729 TRPM7Q96QT4 1865 aa21.45■■□□□ 1.02
PDCD6-214ENST00000628729 IRS4O14654 1257 aaPredicted RBP21.45■■□□□ 1.02
PDCD6-214ENST00000628729 GOLGA2Q08379 1002 aa21.45■■□□□ 1.02
PDCD6-214ENST00000628729 RIC3Q7Z5B4 369 aa21.45■■□□□ 1.02
PDCD6-214ENST00000628729 MYD88Q99836 296 aa21.45■■□□□ 1.02
PDCD6-214ENST00000628729 VEGFBP49765 207 aa21.44■■□□□ 1.02
PDCD6-214ENST00000628729 GMPSP49915 693 aaPredicted RBP21.44■■□□□ 1.02
PDCD6-214ENST00000628729 SCN9AQ15858 1988 aa21.43■■□□□ 1.02
PDCD6-214ENST00000628729 SHTN1A0MZ66 631 aa21.43■■□□□ 1.02
PDCD6-214ENST00000628729 RAD17O75943 681 aa21.43■■□□□ 1.02
PDCD6-214ENST00000628729 GPSM2P81274 684 aa21.43■■□□□ 1.02
PDCD6-214ENST00000628729 USP50Q70EL3 339 aaPredicted RBP21.43■■□□□ 1.02
PDCD6-214ENST00000628729 TMC4Q7Z404 712 aa21.43■■□□□ 1.02
PDCD6-214ENST00000628729 ZBTB38Q8NAP3 1195 aaPredicted RBP21.43■■□□□ 1.02
PDCD6-214ENST00000628729 TRAF5O00463 557 aa21.42■■□□□ 1.02
PDCD6-214ENST00000628729 JARID2Q92833 1246 aaPredicted RBP21.42■■□□□ 1.02
PDCD6-214ENST00000628729 GPR101Q96P66 508 aaPredicted RBP21.42■■□□□ 1.02
PDCD6-214ENST00000628729 SEC31BQ9NQW1 1179 aa21.42■■□□□ 1.02
PDCD6-214ENST00000628729 POLLQ9UGP5 575 aa21.42■■□□□ 1.02
PDCD6-214ENST00000628729 SPEF2Q9C093 1822 aa21.41■■□□□ 1.02
PDCD6-214ENST00000628729 RASSF10A6NK89 507 aa21.41■■□□□ 1.02
PDCD6-214ENST00000628729 CIAPIN1Q6FI81 312 aa21.41■■□□□ 1.02
PDCD6-214ENST00000628729 WWC1Q8IX03 1113 aa21.41■■□□□ 1.02
PDCD6-214ENST00000628729 ADARB2Q9NS39 739 aaKnown RBP21.41■■□□□ 1.02
PDCD6-214ENST00000628729 CDHR2Q9BYE9 1310 aa21.4■■□□□ 1.02
PDCD6-214ENST00000628729 CCDC27Q2M243 656 aa21.4■■□□□ 1.02
PDCD6-214ENST00000628729 CCDC191Q8NCU4 936 aa21.4■■□□□ 1.02
PDCD6-214ENST00000628729 TRPM4Q8TD43 1214 aa21.4■■□□□ 1.02
PDCD6-214ENST00000628729 METTL22Q9BUU2 404 aaPredicted RBP21.4■■□□□ 1.02
PDCD6-214ENST00000628729 NSFL1CQ9UNZ2 370 aaKnown RBP21.4■■□□□ 1.02
PDCD6-214ENST00000628729 MYH3P11055 1940 aa21.39■■□□□ 1.02
PDCD6-214ENST00000628729 FOXN1O15353 648 aa21.39■■□□□ 1.01
PDCD6-214ENST00000628729 PCCAP05165 728 aaPredicted RBP21.39■■□□□ 1.01
PDCD6-214ENST00000628729 HIRAP54198 1017 aaPredicted RBP21.39■■□□□ 1.01
PDCD6-214ENST00000628729 CCDC30Q5VVM6 783 aa21.39■■□□□ 1.01
PDCD6-214ENST00000628729 DBNDD1Q9H9R9 158 aa21.39■■□□□ 1.01
PDCD6-214ENST00000628729 RTL9Q8NET4 1388 aa21.38■■□□□ 1.01
PDCD6-214ENST00000628729 IGKV5-2P06315 115 aa21.38■■□□□ 1.01
PDCD6-214ENST00000628729 CST9Q5W186 159 aa21.38■■□□□ 1.01
PDCD6-214ENST00000628729 CWC25Q9NXE8 425 aaPredicted RBP21.38■■□□□ 1.01
PDCD6-214ENST00000628729 MAP3K2Q9Y2U5 619 aa21.38■■□□□ 1.01
PDCD6-214ENST00000628729 PSME4Q14997 1843 aa21.37■■□□□ 1.01
PDCD6-214ENST00000628729 RIMBP2O15034 1052 aa21.37■■□□□ 1.01
PDCD6-214ENST00000628729 RPS8P62241 208 aaKnown RBP21.37■■□□□ 1.01
PDCD6-214ENST00000628729 WASHC4Q2M389 1173 aa21.37■■□□□ 1.01
PDCD6-214ENST00000628729 G2E3Q7L622 706 aa21.37■■□□□ 1.01
PDCD6-214ENST00000628729 KCNQ5Q9NR82 932 aa21.37■■□□□ 1.01
PDCD6-214ENST00000628729 ZBTB12Q9Y330 459 aaPredicted RBP21.37■■□□□ 1.01
PDCD6-214ENST00000628729 ZNF646O15015 1829 aaPredicted RBP21.36■■□□□ 1.01
PDCD6-214ENST00000628729 PSMD14O00487 310 aa21.36■■□□□ 1.01
PDCD6-214ENST00000628729 TNS4Q8IZW8 715 aa21.36■■□□□ 1.01
PDCD6-214ENST00000628729 TBC1D16Q8TBP0 767 aa21.36■■□□□ 1.01
PDCD6-214ENST00000628729 CCDC85AQ96PX6 553 aaPredicted RBP21.36■■□□□ 1.01
PDCD6-214ENST00000628729 ABT1Q9ULW3 272 aaKnown RBP21.36■■□□□ 1.01
PDCD6-214ENST00000628729 PI4KAP2A4QPH2 592 aa21.35■■□□□ 1.01
PDCD6-214ENST00000628729 C6orf229H3BNL8 230 aa21.35■■□□□ 1.01
PDCD6-214ENST00000628729 PDE8AO60658 829 aa21.35■■□□□ 1.01
PDCD6-214ENST00000628729 TNIP1Q15025 636 aa21.35■■□□□ 1.01
PDCD6-214ENST00000628729 DEFB115Q30KQ5 88 aa21.35■■□□□ 1.01
PDCD6-214ENST00000628729 PI4KAP1Q8N8J0 262 aa21.35■■□□□ 1.01
PDCD6-214ENST00000628729 GLIS2Q9BZE0 524 aaPredicted RBP21.35■■□□□ 1.01
PDCD6-214ENST00000628729 PGAP2Q9UHJ9 254 aa21.35■■□□□ 1.01
PDCD6-214ENST00000628729 FANCIQ9NVI1 1328 aa21.34■■□□□ 1.01
PDCD6-214ENST00000628729 ECE2O60344 883 aa21.34■■□□□ 1.01
PDCD6-214ENST00000628729 DDX58O95786 925 aaKnown RBP21.34■■□□□ 1.01
PDCD6-214ENST00000628729 EGFRP00533 1210 aa21.34■■□□□ 1.01
PDCD6-214ENST00000628729 DOK7Q18PE1 504 aa21.34■■□□□ 1.01
PDCD6-214ENST00000628729 TWISTNBQ3B726 338 aaPredicted RBP21.34■■□□□ 1.01
PDCD6-214ENST00000628729 KSR2Q6VAB6 950 aa21.34■■□□□ 1.01
PDCD6-214ENST00000628729 MICALL2Q8IY33 904 aa21.34■■□□□ 1.01
PDCD6-214ENST00000628729 BCL2L13Q9BXK5 485 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms