RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 ZBTB12Q9Y330 459 aaPredicted RBP4.53□□□□□ -1.68
SCARNA4.1-201ENST00000628597 SCN11AQ9UI33 1791 aa4.53□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CGNL1Q0VF96 1302 aa4.52□□□□□ -1.69
SCARNA4.1-201ENST00000628597 FAM205AQ6ZU69 1335 aa4.52□□□□□ -1.69
SCARNA4.1-201ENST00000628597 PCDH11XQ9BZA7 1347 aa4.52□□□□□ -1.69
SCARNA4.1-201ENST00000628597 PCDH11YQ9BZA8 1340 aa4.52□□□□□ -1.69
SCARNA4.1-201ENST00000628597 MUC3AQ02505 3323 aa4.52□□□□□ -1.69
SCARNA4.1-201ENST00000628597 SPTBN4Q9H254 2564 aa4.52□□□□□ -1.69
SCARNA4.1-201ENST00000628597 ADM5C9JUS6 153 aa4.52□□□□□ -1.69
SCARNA4.1-201ENST00000628597 SGPL1O95470 568 aa4.52□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CCL5P13501 91 aa4.52□□□□□ -1.69
SCARNA4.1-201ENST00000628597 TATP17735 454 aaPredicted RBP4.52□□□□□ -1.69
SCARNA4.1-201ENST00000628597 GMPSP49915 693 aaPredicted RBP4.52□□□□□ -1.69
SCARNA4.1-201ENST00000628597 MDM2Q00987 491 aaPredicted RBP4.52□□□□□ -1.69
SCARNA4.1-201ENST00000628597 PDE3AQ14432 1141 aa4.52□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CCDC85BQ15834 202 aaPredicted RBP4.52□□□□□ -1.69
SCARNA4.1-201ENST00000628597 DGLUCYQ7Z3D6 616 aa4.52□□□□□ -1.69
SCARNA4.1-201ENST00000628597 ZKSCAN4Q969J2 545 aaPredicted RBP4.52□□□□□ -1.69
SCARNA4.1-201ENST00000628597 WASHC2AQ641Q2 1341 aa4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 MAST4O15021 2626 aa4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 MANSC4A6NHS7 340 aaPredicted RBP4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 SOBPA7XYQ1 873 aa4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 UBE2Q2LH0YL09 131 aa4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 ALADP13716 330 aa4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 PRMT2P55345 433 aa4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 AKNAD1Q5T1N1 836 aa4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 NUTM1Q86Y26 1132 aa4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 IFNL1Q8IU54 200 aa4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 C7orf43Q8WVR3 580 aa4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 PAWRQ96IZ0 340 aaKnown RBP4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CHAMP1Q96JM3 812 aa4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 MFSD14AQ96MC6 490 aa4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CXXC1Q9P0U4 656 aaPredicted RBP4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CNOT7Q9UIV1 285 aaKnown RBP4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 PIK3C2GO75747 1445 aa4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 ACACBO00763 2458 aa4.51□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CDHR2Q9BYE9 1310 aa4.5□□□□□ -1.69
SCARNA4.1-201ENST00000628597 DOT1LQ8TEK3 1739 aa4.5□□□□□ -1.69
SCARNA4.1-201ENST00000628597 SRGNP10124 158 aa4.5□□□□□ -1.69
SCARNA4.1-201ENST00000628597 HOXB3P14651 431 aaPredicted RBP4.5□□□□□ -1.69
SCARNA4.1-201ENST00000628597 ST5P78524 1137 aa4.5□□□□□ -1.69
SCARNA4.1-201ENST00000628597 SMAD3P84022 425 aaKnown RBP4.5□□□□□ -1.69
SCARNA4.1-201ENST00000628597 GRIN2CQ14957 1233 aa4.5□□□□□ -1.69
SCARNA4.1-201ENST00000628597 TNIP1Q15025 636 aa4.5□□□□□ -1.69
SCARNA4.1-201ENST00000628597 RBM26Q5T8P6 1007 aaKnown RBP4.5□□□□□ -1.69
SCARNA4.1-201ENST00000628597 POTEEQ6S8J3 1075 aa4.5□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CDCA5Q96FF9 252 aa4.5□□□□□ -1.69
SCARNA4.1-201ENST00000628597 TRIM47Q96LD4 638 aa4.5□□□□□ -1.69
SCARNA4.1-201ENST00000628597 PSMD1Q99460 953 aa4.5□□□□□ -1.69
SCARNA4.1-201ENST00000628597 PRRX2Q99811 253 aa4.5□□□□□ -1.69
SCARNA4.1-201ENST00000628597 ATG3Q9NT62 314 aa4.5□□□□□ -1.69
SCARNA4.1-201ENST00000628597 SETXQ7Z333 2677 aaKnown RBP4.5□□□□□ -1.69
SCARNA4.1-201ENST00000628597 FAM208BQ5VWN6 2430 aa4.5□□□□□ -1.69
SCARNA4.1-201ENST00000628597 MAP3K19Q56UN5 1328 aa4.49□□□□□ -1.69
SCARNA4.1-201ENST00000628597 TAF1LQ8IZX4 1826 aa4.49□□□□□ -1.69
SCARNA4.1-201ENST00000628597 NAV2Q8IVL1 2488 aa4.49□□□□□ -1.69
SCARNA4.1-201ENST00000628597 VPS8Q8N3P4 1428 aa4.49□□□□□ -1.69
SCARNA4.1-201ENST00000628597 ZIC2O95409 532 aaPredicted RBP4.49□□□□□ -1.69
SCARNA4.1-201ENST00000628597 GNRH1P01148 92 aa4.49□□□□□ -1.69
SCARNA4.1-201ENST00000628597 HOXD10P28358 340 aa4.49□□□□□ -1.69
SCARNA4.1-201ENST00000628597 GRK4P32298 578 aa4.49□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CRKLP46109 303 aaKnown RBP4.49□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CRHR2Q13324 411 aa4.49□□□□□ -1.69
SCARNA4.1-201ENST00000628597 SKIV2LQ15477 1246 aaKnown RBP4.49□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CC2D2BQ6DHV5 1058 aa4.49□□□□□ -1.69
SCARNA4.1-201ENST00000628597 RAET1EQ8TD07 263 aa4.49□□□□□ -1.69
SCARNA4.1-201ENST00000628597 IRF2BPLQ9H1B7 796 aa4.49□□□□□ -1.69
SCARNA4.1-201ENST00000628597 NARFQ9UHQ1 456 aa4.49□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CARMIL3Q8ND23 1372 aa4.49□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CENPFP49454 3210 aa4.49□□□□□ -1.69
SCARNA4.1-201ENST00000628597 LAMA2P24043 3122 aaKnown RBP4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 PPLO60437 1756 aa4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 FER1L6Q2WGJ9 1857 aa4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 WDHD1O75717 1129 aaPredicted RBP4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 NPR1P16066 1061 aa4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 IGFBP4P22692 258 aa4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 ALDH1B1P30837 517 aa4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 NF2P35240 595 aa4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CXCL9Q07325 125 aa4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 FAM50AQ14320 339 aaKnown RBP4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 TBC1D10BQ4KMP7 808 aaPredicted RBP4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 GRIPAP1Q4V328 841 aa4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 OLFM4Q6UX06 510 aa4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 MICALL2Q8IY33 904 aa4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 TMX4Q9H1E5 349 aaPredicted RBP4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CABP1Q9NZU7 370 aa4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 NPC1L1Q9UHC9 1359 aa4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 MRC1P22897 1456 aa4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 ZFHX2Q9C0A1 2572 aaPredicted RBP4.48□□□□□ -1.69
SCARNA4.1-201ENST00000628597 TTC21BQ7Z4L5 1316 aa4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 NCOR2Q9Y618 2525 aa4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CHD6Q8TD26 2715 aa4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 PPIP5K2O43314 1243 aa4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 KCNQ1P51787 676 aa4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 SPRYD7Q5W111 196 aa4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 PRR5LQ6MZQ0 368 aa4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 MOB2Q70IA6 237 aa4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 CNBD1Q8NA66 436 aa4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 IP6K1Q92551 441 aa4.47□□□□□ -1.69
SCARNA4.1-201ENST00000628597 ATOH1Q92858 354 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms