RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 FPGT-TNNI3KV9GXZ4 949 aa13.39□□□□□ -0.27
VARS2-213ENST00000625423 RFX5P48382 616 aaPredicted RBP13.39□□□□□ -0.27
VARS2-213ENST00000625423 ATP5JP18859 108 aa13.38□□□□□ -0.27
VARS2-213ENST00000625423 UBE3BQ7Z3V4 1068 aa13.38□□□□□ -0.27
VARS2-213ENST00000625423 LRP10Q7Z4F1 713 aa13.38□□□□□ -0.27
VARS2-213ENST00000625423 HMG20BQ9P0W2 317 aa13.38□□□□□ -0.27
VARS2-213ENST00000625423 COL15A1P39059 1388 aa13.38□□□□□ -0.27
VARS2-213ENST00000625423 ATP5J2-PTCD1G3V325 749 aa13.38□□□□□ -0.27
VARS2-213ENST00000625423 AP5Z1O43299 807 aa13.38□□□□□ -0.27
VARS2-213ENST00000625423 PTCD1O75127 700 aaKnown RBP13.38□□□□□ -0.27
VARS2-213ENST00000625423 DNAJC2Q99543 621 aaKnown RBP13.38□□□□□ -0.27
VARS2-213ENST00000625423 ALDH8A1Q9H2A2 487 aaPredicted RBP13.38□□□□□ -0.27
VARS2-213ENST00000625423 JCADQ9P266 1359 aa13.38□□□□□ -0.27
VARS2-213ENST00000625423 ADAMTS7Q9UKP4 1686 aa13.38□□□□□ -0.27
VARS2-213ENST00000625423 SNRPA1P09661 255 aaKnown RBP13.38□□□□□ -0.27
VARS2-213ENST00000625423 LIG1P18858 919 aa13.38□□□□□ -0.27
VARS2-213ENST00000625423 TSGA10IPQ3SY00 556 aa13.38□□□□□ -0.27
VARS2-213ENST00000625423 SASS6Q6UVJ0 657 aa13.38□□□□□ -0.27
VARS2-213ENST00000625423 CCDC129Q6ZRS4 1044 aa13.38□□□□□ -0.27
VARS2-213ENST00000625423 TTC5Q8N0Z6 440 aa13.38□□□□□ -0.27
VARS2-213ENST00000625423 PDCL3Q9H2J4 239 aa13.38□□□□□ -0.27
VARS2-213ENST00000625423 FAM13BQ9NYF5 915 aa13.38□□□□□ -0.27
VARS2-213ENST00000625423 TFIP11Q9UBB9 837 aaKnown RBP13.38□□□□□ -0.27
VARS2-213ENST00000625423 ATF3P18847 181 aa13.37□□□□□ -0.27
VARS2-213ENST00000625423 CAMK4Q16566 473 aa13.37□□□□□ -0.27
VARS2-213ENST00000625423 GLIPR1L2Q4G1C9 344 aa13.37□□□□□ -0.27
VARS2-213ENST00000625423 IFNL2Q8IZJ0 200 aa13.37□□□□□ -0.27
VARS2-213ENST00000625423 SEC62Q99442 399 aaKnown RBP13.37□□□□□ -0.27
VARS2-213ENST00000625423 MRC1P22897 1456 aa13.37□□□□□ -0.27
VARS2-213ENST00000625423 LMTK3Q96Q04 1460 aa13.37□□□□□ -0.27
VARS2-213ENST00000625423 C5P01031 1676 aa13.37□□□□□ -0.27
VARS2-213ENST00000625423 CCDC192P0DO97 292 aa13.37□□□□□ -0.27
VARS2-213ENST00000625423 CSB-PGBD3P0DP91 1061 aa13.37□□□□□ -0.27
VARS2-213ENST00000625423 PDIA4P13667 645 aaKnown RBP13.37□□□□□ -0.27
VARS2-213ENST00000625423 DNTTIP2Q5QJE6 756 aaKnown RBP13.37□□□□□ -0.27
VARS2-213ENST00000625423 USPL1Q5W0Q7 1092 aa13.37□□□□□ -0.27
VARS2-213ENST00000625423 C17orf53Q8N3J3 647 aaPredicted RBP13.37□□□□□ -0.27
VARS2-213ENST00000625423 DDX17Q92841 729 aaKnown RBP13.37□□□□□ -0.27
VARS2-213ENST00000625423 RGPD5Q99666 1765 aa13.37□□□□□ -0.27
VARS2-213ENST00000625423 PIBF1Q8WXW3 757 aa13.37□□□□□ -0.27
VARS2-213ENST00000625423 DBNDD2Q9BQY9 259 aa13.37□□□□□ -0.27
VARS2-213ENST00000625423 CCDC9Q9Y3X0 531 aaKnown RBP13.37□□□□□ -0.27
VARS2-213ENST00000625423 A0A087WZG4 1122 aa13.36□□□□□ -0.27
VARS2-213ENST00000625423 TRPM3Q9HCF6 1732 aaPredicted RBP13.36□□□□□ -0.27
VARS2-213ENST00000625423 MEGF6O75095 1541 aa13.36□□□□□ -0.27
VARS2-213ENST00000625423 ELP1O95163 1332 aa13.36□□□□□ -0.27
VARS2-213ENST00000625423 C1orf167Q5SNV9 1468 aa13.36□□□□□ -0.27
VARS2-213ENST00000625423 JAK2O60674 1132 aa13.36□□□□□ -0.27
VARS2-213ENST00000625423 NOLC1Q14978 699 aaKnown RBP eCLIP13.36□□□□□ -0.27
VARS2-213ENST00000625423 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
VARS2-213ENST00000625423 NEK1Q96PY6 1258 aa13.36□□□□□ -0.27
VARS2-213ENST00000625423 NUP62CLQ9H1M0 184 aa13.36□□□□□ -0.27
VARS2-213ENST00000625423 KRT32Q14532 448 aa13.35□□□□□ -0.27
VARS2-213ENST00000625423 RABL6Q3YEC7 729 aaPredicted RBP13.35□□□□□ -0.27
VARS2-213ENST00000625423 SPATA32Q96LK8 384 aa13.35□□□□□ -0.27
VARS2-213ENST00000625423 CYP27B1O15528 508 aa13.35□□□□□ -0.27
VARS2-213ENST00000625423 MAP3K11Q16584 847 aa13.35□□□□□ -0.27
VARS2-213ENST00000625423 DDX46Q7L014 1031 aaKnown RBP13.35□□□□□ -0.27
VARS2-213ENST00000625423 FMNL2Q96PY5 1086 aa13.35□□□□□ -0.27
VARS2-213ENST00000625423 ZNF609O15014 1411 aa13.35□□□□□ -0.27
VARS2-213ENST00000625423 GOLGA6L4A6NEF3 574 aa13.35□□□□□ -0.27
VARS2-213ENST00000625423 CABLES1Q8TDN4 633 aa13.35□□□□□ -0.27
VARS2-213ENST00000625423 SCAND2PQ9GZW5 306 aaPredicted RBP13.35□□□□□ -0.27
VARS2-213ENST00000625423 DACT1Q9NYF0 836 aa13.35□□□□□ -0.27
VARS2-213ENST00000625423 ZNF142P52746 1687 aaPredicted RBP13.35□□□□□ -0.27
VARS2-213ENST00000625423 Q6ZUG5 572 aa13.34□□□□□ -0.27
VARS2-213ENST00000625423 CKAP2LQ8IYA6 745 aa13.34□□□□□ -0.27
VARS2-213ENST00000625423 DCAF5Q96JK2 942 aa13.34□□□□□ -0.27
VARS2-213ENST00000625423 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.34□□□□□ -0.275e-7■■□□□ 12.2
VARS2-213ENST00000625423 CYP21A2P08686 494 aa13.34□□□□□ -0.27
VARS2-213ENST00000625423 CHRNA2Q15822 529 aa13.34□□□□□ -0.27
VARS2-213ENST00000625423 LEO1Q8WVC0 666 aaPredicted RBP13.34□□□□□ -0.27
VARS2-213ENST00000625423 GTF3C6Q969F1 213 aa13.34□□□□□ -0.27
VARS2-213ENST00000625423 HAUS7Q99871 368 aa13.34□□□□□ -0.27
VARS2-213ENST00000625423 LRRC2Q9BYS8 371 aa13.34□□□□□ -0.27
VARS2-213ENST00000625423 DYNC1I1O14576 645 aa13.34□□□□□ -0.27
VARS2-213ENST00000625423 HSP90B1P14625 803 aaKnown RBP13.34□□□□□ -0.27
VARS2-213ENST00000625423 TYRO3Q06418 890 aa13.34□□□□□ -0.27
VARS2-213ENST00000625423 MCMDC2Q4G0Z9 681 aa13.34□□□□□ -0.27
VARS2-213ENST00000625423 LMBR1LQ6UX01 489 aa13.34□□□□□ -0.27
VARS2-213ENST00000625423 SPC24Q8NBT2 197 aa13.34□□□□□ -0.27
VARS2-213ENST00000625423 C19orf44Q9H6X5 657 aa13.34□□□□□ -0.27
VARS2-213ENST00000625423 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
VARS2-213ENST00000625423 DDX11Q96FC9 970 aa13.33□□□□□ -0.28
VARS2-213ENST00000625423 TNMDQ9H2S6 317 aa13.33□□□□□ -0.28
VARS2-213ENST00000625423 MRVI1Q9Y6F6 885 aa13.33□□□□□ -0.28
VARS2-213ENST00000625423 CASP7P55210 303 aa13.33□□□□□ -0.28
VARS2-213ENST00000625423 FAM200AQ8TCP9 573 aa13.33□□□□□ -0.28
VARS2-213ENST00000625423 BRF1Q92994 677 aa13.33□□□□□ -0.28
VARS2-213ENST00000625423 SCN11AQ9UI33 1791 aa13.33□□□□□ -0.28
VARS2-213ENST00000625423 CABP4P57796 275 aa13.32□□□□□ -0.28
VARS2-213ENST00000625423 SLFNL1Q499Z3 407 aa13.32□□□□□ -0.28
VARS2-213ENST00000625423 LUZP1Q86V48 1076 aa13.32□□□□□ -0.28
VARS2-213ENST00000625423 PLBD2Q8NHP8 589 aa13.32□□□□□ -0.28
VARS2-213ENST00000625423 NEUROD6Q96NK8 337 aa13.32□□□□□ -0.28
VARS2-213ENST00000625423 KCNF1Q9H3M0 494 aa13.32□□□□□ -0.28
VARS2-213ENST00000625423 FGD1P98174 961 aa13.31□□□□□ -0.28
VARS2-213ENST00000625423 PGBD1Q96JS3 809 aa13.31□□□□□ -0.28
VARS2-213ENST00000625423 H3BQV1 296 aa13.31□□□□□ -0.28
VARS2-213ENST00000625423 RESTQ13127 1097 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms