RNA–Protein interactions for RNA: ENST00000624403.1

ATRX-216, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-216ENST00000624403 ISCA1Q9BUE6 129 aa12.78□□□□□ -0.36
ATRX-216ENST00000624403 QTRT2Q9H974 415 aaKnown RBP12.78□□□□□ -0.36
ATRX-216ENST00000624403 CCDC87Q9NVE4 849 aa12.78□□□□□ -0.36
ATRX-216ENST00000624403 CWC25Q9NXE8 425 aaPredicted RBP12.78□□□□□ -0.36
ATRX-216ENST00000624403 MAP3K15Q6ZN16 1313 aa12.78□□□□□ -0.36
ATRX-216ENST00000624403 COL15A1P39059 1388 aa12.78□□□□□ -0.36
ATRX-216ENST00000624403 CICQ96RK0 1608 aaPredicted RBP12.77□□□□□ -0.36
ATRX-216ENST00000624403 AFDNP55196 1824 aaKnown RBP12.77□□□□□ -0.37
ATRX-216ENST00000624403 C2orf72A6NCS6 295 aa12.77□□□□□ -0.37
ATRX-216ENST00000624403 H7C1W4 665 aa12.77□□□□□ -0.37
ATRX-216ENST00000624403 IL6STP40189 918 aaPredicted RBP12.77□□□□□ -0.37
ATRX-216ENST00000624403 CRKLP46109 303 aaKnown RBP12.77□□□□□ -0.37
ATRX-216ENST00000624403 EMP3P54852 163 aa12.77□□□□□ -0.37
ATRX-216ENST00000624403 TCIRG1Q13488 830 aa12.77□□□□□ -0.37
ATRX-216ENST00000624403 BMP2KLQ5H9B9 411 aa12.77□□□□□ -0.37
ATRX-216ENST00000624403 FAM182BQ5T319 152 aa12.77□□□□□ -0.37
ATRX-216ENST00000624403 SEPT12Q8IYM1 358 aa12.77□□□□□ -0.37
ATRX-216ENST00000624403 CCDC191Q8NCU4 936 aa12.77□□□□□ -0.37
ATRX-216ENST00000624403 NOP58Q9Y2X3 529 aaKnown RBP12.77□□□□□ -0.37
ATRX-216ENST00000624403 KAT6BQ8WYB5 2073 aa12.76□□□□□ -0.37
ATRX-216ENST00000624403 KIF3CO14782 793 aa12.76□□□□□ -0.37
ATRX-216ENST00000624403 HSP90AB4PQ58FF6 505 aa12.76□□□□□ -0.37
ATRX-216ENST00000624403 NPM2Q86SE8 214 aaKnown RBP12.76□□□□□ -0.37
ATRX-216ENST00000624403 ARXQ96QS3 562 aa12.76□□□□□ -0.37
ATRX-216ENST00000624403 RREB1Q92766 1687 aa12.76□□□□□ -0.37
ATRX-216ENST00000624403 EIF5P55010 431 aaKnown RBP12.75□□□□□ -0.37
ATRX-216ENST00000624403 TRIM28Q13263 835 aaKnown RBP12.75□□□□□ -0.37
ATRX-216ENST00000624403 HLFQ16534 295 aa12.75□□□□□ -0.37
ATRX-216ENST00000624403 TTC22Q5TAA0 569 aa12.75□□□□□ -0.37
ATRX-216ENST00000624403 NHSQ6T4R5 1651 aa12.75□□□□□ -0.37
ATRX-216ENST00000624403 GIGYF2Q6Y7W6 1299 aaKnown RBP12.75□□□□□ -0.37
ATRX-216ENST00000624403 RHPN1Q8TCX5 695 aa12.75□□□□□ -0.37
ATRX-216ENST00000624403 SALL3Q9BXA9 1300 aa12.75□□□□□ -0.37
ATRX-216ENST00000624403 PA2G4Q9UQ80 394 aaKnown RBP12.75□□□□□ -0.37
ATRX-216ENST00000624403 GSPT1P15170 499 aaKnown RBP12.74□□□□□ -0.37
ATRX-216ENST00000624403 FOXO4P98177 505 aa12.74□□□□□ -0.37
ATRX-216ENST00000624403 RABL6Q3YEC7 729 aaPredicted RBP12.74□□□□□ -0.37
ATRX-216ENST00000624403 DZIP3Q86Y13 1208 aaKnown RBP12.74□□□□□ -0.37
ATRX-216ENST00000624403 KIF1BPQ96EK5 621 aa12.74□□□□□ -0.37
ATRX-216ENST00000624403 IL1RAPL2Q9NP60 686 aa12.74□□□□□ -0.37
ATRX-216ENST00000624403 TBC1D2BQ9UPU7 963 aa12.74□□□□□ -0.37
ATRX-216ENST00000624403 ZNF831Q5JPB2 1677 aa12.73□□□□□ -0.37
ATRX-216ENST00000624403 ERVV-1B6SEH8 477 aa12.73□□□□□ -0.37
ATRX-216ENST00000624403 ANP32AP39687 249 aaKnown RBP12.73□□□□□ -0.37
ATRX-216ENST00000624403 PDE1AP54750 535 aa12.73□□□□□ -0.37
ATRX-216ENST00000624403 OS9Q13438 667 aaPredicted RBP12.73□□□□□ -0.37
ATRX-216ENST00000624403 HSP90AB3PQ58FF7 597 aa12.73□□□□□ -0.37
ATRX-216ENST00000624403 RTL5Q5HYW3 569 aaPredicted RBP12.73□□□□□ -0.37
ATRX-216ENST00000624403 LINC00116Q8NCU8 138 aa12.73□□□□□ -0.37
ATRX-216ENST00000624403 OSBPL3Q9H4L5 887 aa12.73□□□□□ -0.37
ATRX-216ENST00000624403 BTAF1O14981 1849 aa12.72□□□□□ -0.37
ATRX-216ENST00000624403 POTEB3A0JP26 581 aa12.72□□□□□ -0.37
ATRX-216ENST00000624403 FAM205CA6NFA0 338 aa12.72□□□□□ -0.37
ATRX-216ENST00000624403 HOXB1P14653 301 aaPredicted RBP12.72□□□□□ -0.37
ATRX-216ENST00000624403 RFX5P48382 616 aaPredicted RBP12.72□□□□□ -0.37
ATRX-216ENST00000624403 POTEBQ6S5H4 581 aa12.72□□□□□ -0.37
ATRX-216ENST00000624403 ERC1Q8IUD2 1116 aa12.72□□□□□ -0.37
ATRX-216ENST00000624403 STAP2Q9UGK3 403 aa12.72□□□□□ -0.37
ATRX-216ENST00000624403 COL5A3P25940 1745 aaPredicted RBP12.71□□□□□ -0.37
ATRX-216ENST00000624403 RIMBP2O15034 1052 aa12.71□□□□□ -0.37
ATRX-216ENST00000624403 PCCAP05165 728 aaPredicted RBP12.71□□□□□ -0.37
ATRX-216ENST00000624403 MX1P20591 662 aa12.71□□□□□ -0.37
ATRX-216ENST00000624403 GPTP24298 496 aa12.71□□□□□ -0.37
ATRX-216ENST00000624403 KCNQ4P56696 695 aa12.71□□□□□ -0.37
ATRX-216ENST00000624403 G3BP1Q13283 466 aaKnown RBP eCLIP12.71□□□□□ -0.37
ATRX-216ENST00000624403 LMBR1LQ6UX01 489 aa12.71□□□□□ -0.37
ATRX-216ENST00000624403 NLRP10Q86W26 655 aa12.71□□□□□ -0.37
ATRX-216ENST00000624403 NUTM1Q86Y26 1132 aa12.71□□□□□ -0.37
ATRX-216ENST00000624403 KLHDC4Q8TBB5 520 aa12.71□□□□□ -0.37
ATRX-216ENST00000624403 TMC2Q8TDI7 906 aa12.71□□□□□ -0.37
ATRX-216ENST00000624403 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.37
ATRX-216ENST00000624403 CNTNAP4Q9C0A0 1308 aa12.7□□□□□ -0.38
ATRX-216ENST00000624403 CDC45O75419 566 aa12.7□□□□□ -0.38
ATRX-216ENST00000624403 CAMTA2O94983 1202 aa12.7□□□□□ -0.38
ATRX-216ENST00000624403 TSHZ3Q63HK5 1081 aa12.7□□□□□ -0.38
ATRX-216ENST00000624403 ZNF34Q8IZ26 560 aa12.7□□□□□ -0.38
ATRX-216ENST00000624403 ZBTB38Q8NAP3 1195 aaPredicted RBP12.7□□□□□ -0.38
ATRX-216ENST00000624403 SIL1Q9H173 461 aa12.7□□□□□ -0.38
ATRX-216ENST00000624403 COPRSQ9NQ92 184 aa12.7□□□□□ -0.38
ATRX-216ENST00000624403 AOX1Q06278 1338 aa12.69□□□□□ -0.38
ATRX-216ENST00000624403 SASH1O94885 1247 aa12.69□□□□□ -0.38
ATRX-216ENST00000624403 SDSP20132 328 aa12.69□□□□□ -0.38
ATRX-216ENST00000624403 PTPN12Q05209 780 aaKnown RBP12.69□□□□□ -0.38
ATRX-216ENST00000624403 ZNF772Q68DY9 489 aaPredicted RBP12.69□□□□□ -0.38
ATRX-216ENST00000624403 TBC1D9Q6ZT07 1266 aa12.69□□□□□ -0.38
ATRX-216ENST00000624403 KRT27Q7Z3Y8 459 aa12.69□□□□□ -0.38
ATRX-216ENST00000624403 FAM89AQ96GI7 184 aa12.69□□□□□ -0.38
ATRX-216ENST00000624403 CCNL1Q9UK58 526 aaPredicted RBP12.69□□□□□ -0.38
ATRX-216ENST00000624403 UBN2Q6ZU65 1347 aa12.68□□□□□ -0.38
ATRX-216ENST00000624403 CDHR2Q9BYE9 1310 aa12.68□□□□□ -0.38
ATRX-216ENST00000624403 MFAP1P55081 439 aaKnown RBP12.68□□□□□ -0.38
ATRX-216ENST00000624403 RC3H1Q5TC82 1133 aaKnown RBP12.68□□□□□ -0.38
ATRX-216ENST00000624403 CLASRPQ8N2M8 674 aaKnown RBP12.68□□□□□ -0.38
ATRX-216ENST00000624403 HS3ST6Q96QI5 342 aa12.68□□□□□ -0.38
ATRX-216ENST00000624403 PLA2G12BQ9BX93 195 aa12.68□□□□□ -0.38
ATRX-216ENST00000624403 UPF2Q9HAU5 1272 aaKnown RBP12.68□□□□□ -0.38
ATRX-216ENST00000624403 CHMP3Q9Y3E7 222 aa12.68□□□□□ -0.38
ATRX-216ENST00000624403 MYH14Q7Z406 1995 aaKnown RBP12.68□□□□□ -0.38
ATRX-216ENST00000624403 ANKRD36CQ5JPF3 1778 aa12.68□□□□□ -0.38
ATRX-216ENST00000624403 SBF2Q86WG5 1849 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms