RNA–Protein interactions for RNA: ENST00000624160.1

AC004009.3-201, humanhuman

BASIC

Gene AC004009.3, Length 645 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004009.3-201ENST00000624160 NUTM1Q86Y26 1132 aa10.57□□□□□ -0.72
AC004009.3-201ENST00000624160 DNAJC10Q8IXB1 793 aa10.57□□□□□ -0.72
AC004009.3-201ENST00000624160 LRRC4BQ9NT99 713 aa10.57□□□□□ -0.72
AC004009.3-201ENST00000624160 DBF4Q9UBU7 674 aaPredicted RBP10.57□□□□□ -0.72
AC004009.3-201ENST00000624160 FAM198AQ9UFP1 575 aa10.57□□□□□ -0.72
AC004009.3-201ENST00000624160 EP400Q96L91 3159 aa10.57□□□□□ -0.72
AC004009.3-201ENST00000624160 DDX11L8A8MPP1 907 aa10.56□□□□□ -0.72
AC004009.3-201ENST00000624160 EIF2S2P20042 333 aaKnown RBP10.56□□□□□ -0.72
AC004009.3-201ENST00000624160 EXOSC9Q06265 439 aaKnown RBP10.56□□□□□ -0.72
AC004009.3-201ENST00000624160 ITPK1Q13572 414 aa10.56□□□□□ -0.72
AC004009.3-201ENST00000624160 SLC15A2Q16348 729 aa10.56□□□□□ -0.72
AC004009.3-201ENST00000624160 TBC1D2Q9BYX2 928 aa10.56□□□□□ -0.72
AC004009.3-201ENST00000624160 LAMB4A4D0S4 1761 aa10.56□□□□□ -0.72
AC004009.3-201ENST00000624160 C4BP0C0L5 1744 aa10.55□□□□□ -0.72
AC004009.3-201ENST00000624160 ELL2O00472 640 aaPredicted RBP10.55□□□□□ -0.72
AC004009.3-201ENST00000624160 RPS6KA4O75676 772 aa10.55□□□□□ -0.72
AC004009.3-201ENST00000624160 IL6STP40189 918 aaPredicted RBP10.55□□□□□ -0.72
AC004009.3-201ENST00000624160 CLK2P49760 499 aaKnown RBP10.55□□□□□ -0.72
AC004009.3-201ENST00000624160 TRAPPC3LQ5T215 181 aa10.55□□□□□ -0.72
AC004009.3-201ENST00000624160 MYSM1Q5VVJ2 828 aa10.55□□□□□ -0.72
AC004009.3-201ENST00000624160 TRMT2AQ8IZ69 625 aaKnown RBP10.55□□□□□ -0.72
AC004009.3-201ENST00000624160 LINC00116Q8NCU8 138 aa10.55□□□□□ -0.72
AC004009.3-201ENST00000624160 SLC4A9Q96Q91 983 aa10.55□□□□□ -0.72
AC004009.3-201ENST00000624160 HYPKQ9NX55 129 aa10.55□□□□□ -0.72
AC004009.3-201ENST00000624160 USP16Q9Y5T5 823 aa10.55□□□□□ -0.72
AC004009.3-201ENST00000624160 COL5A3P25940 1745 aaPredicted RBP10.55□□□□□ -0.72
AC004009.3-201ENST00000624160 TJP1Q07157 1748 aa10.55□□□□□ -0.72
AC004009.3-201ENST00000624160 CANXP27824 592 aaKnown RBP10.54□□□□□ -0.72
AC004009.3-201ENST00000624160 RFC4P35249 363 aa10.54□□□□□ -0.72
AC004009.3-201ENST00000624160 KCNQ4P56696 695 aa10.54□□□□□ -0.72
AC004009.3-201ENST00000624160 NUP188Q5SRE5 1749 aa10.54□□□□□ -0.72
AC004009.3-201ENST00000624160 C8orf58Q8NAV2 365 aa10.54□□□□□ -0.72
AC004009.3-201ENST00000624160 DDX21Q9NR30 783 aaKnown RBP eCLIP10.54□□□□□ -0.72
AC004009.3-201ENST00000624160 ZNF330Q9Y3S2 320 aaPredicted RBP10.54□□□□□ -0.72
AC004009.3-201ENST00000624160 TAF1LQ8IZX4 1826 aa10.54□□□□□ -0.72
AC004009.3-201ENST00000624160 ZPR1O75312 459 aa10.53□□□□□ -0.72
AC004009.3-201ENST00000624160 DDX58O95786 925 aaKnown RBP10.53□□□□□ -0.72
AC004009.3-201ENST00000624160 SLC4A3P48751 1232 aa10.53□□□□□ -0.72
AC004009.3-201ENST00000624160 KIF6Q6ZMV9 814 aa10.53□□□□□ -0.72
AC004009.3-201ENST00000624160 HOMEZQ8IX15 550 aa10.53□□□□□ -0.72
AC004009.3-201ENST00000624160 RDH13Q8NBN7 331 aa10.53□□□□□ -0.72
AC004009.3-201ENST00000624160 PROCA1Q8NCQ7 364 aaPredicted RBP10.53□□□□□ -0.72
AC004009.3-201ENST00000624160 ZNF652Q9Y2D9 606 aa10.53□□□□□ -0.72
AC004009.3-201ENST00000624160 COL15A1P39059 1388 aa10.52□□□□□ -0.72
AC004009.3-201ENST00000624160 VAMP4O75379 141 aa10.52□□□□□ -0.73
AC004009.3-201ENST00000624160 A1BGP04217 495 aa10.52□□□□□ -0.73
AC004009.3-201ENST00000624160 MYL6BP14649 208 aa10.52□□□□□ -0.73
AC004009.3-201ENST00000624160 KRT24Q2M2I5 525 aa10.52□□□□□ -0.73
AC004009.3-201ENST00000624160 PROX2Q3B8N5 592 aa10.52□□□□□ -0.73
AC004009.3-201ENST00000624160 ALDH1L2Q3SY69 923 aa10.52□□□□□ -0.73
AC004009.3-201ENST00000624160 INTS5Q6P9B9 1019 aaKnown RBP10.52□□□□□ -0.73
AC004009.3-201ENST00000624160 SLC16A10Q8TF71 515 aa10.52□□□□□ -0.73
AC004009.3-201ENST00000624160 CHPF2Q9P2E5 772 aa10.52□□□□□ -0.73
AC004009.3-201ENST00000624160 ZBTB1Q9Y2K1 713 aa10.52□□□□□ -0.73
AC004009.3-201ENST00000624160 PRAMEF22A3QJZ6 481 aa10.51□□□□□ -0.73
AC004009.3-201ENST00000624160 SMAPO00193 183 aa10.51□□□□□ -0.73
AC004009.3-201ENST00000624160 TSPYL6Q8N831 410 aa10.51□□□□□ -0.73
AC004009.3-201ENST00000624160 NECTIN2Q92692 538 aa10.51□□□□□ -0.73
AC004009.3-201ENST00000624160 TMEM134Q9H6X4 195 aa10.51□□□□□ -0.73
AC004009.3-201ENST00000624160 CD46P15529 392 aa10.5□□□□□ -0.73
AC004009.3-201ENST00000624160 EIF5P55010 431 aaKnown RBP10.5□□□□□ -0.73
AC004009.3-201ENST00000624160 ZNF827Q17R98 1081 aa10.5□□□□□ -0.73
AC004009.3-201ENST00000624160 DZIP3Q86Y13 1208 aaKnown RBP10.5□□□□□ -0.73
AC004009.3-201ENST00000624160 SMC4Q9NTJ3 1288 aa10.5□□□□□ -0.73
AC004009.3-201ENST00000624160 KIAA1468Q9P260 1216 aa10.5□□□□□ -0.73
AC004009.3-201ENST00000624160 KIF16BQ96L93 1317 aa10.5□□□□□ -0.73
AC004009.3-201ENST00000624160 QSER1Q2KHR3 1735 aa10.5□□□□□ -0.73
AC004009.3-201ENST00000624160 ERVV-1B6SEH8 477 aa10.49□□□□□ -0.73
AC004009.3-201ENST00000624160 IPO8O15397 1037 aaKnown RBP10.49□□□□□ -0.73
AC004009.3-201ENST00000624160 R3HDM1Q15032 1099 aaKnown RBP10.49□□□□□ -0.73
AC004009.3-201ENST00000624160 HSP90AB3PQ58FF7 597 aa10.49□□□□□ -0.73
AC004009.3-201ENST00000624160 CLEC4GQ6UXB4 293 aa10.49□□□□□ -0.73
AC004009.3-201ENST00000624160 RIC3Q7Z5B4 369 aa10.49□□□□□ -0.73
AC004009.3-201ENST00000624160 NLGN1Q8N2Q7 840 aa10.49□□□□□ -0.73
AC004009.3-201ENST00000624160 SPIRE2Q8WWL2 714 aa10.49□□□□□ -0.73
AC004009.3-201ENST00000624160 NARFQ9UHQ1 456 aa10.49□□□□□ -0.73
AC004009.3-201ENST00000624160 PNPLA7Q6ZV29 1317 aa10.49□□□□□ -0.73
AC004009.3-201ENST00000624160 RAD21O60216 631 aa10.48□□□□□ -0.73
AC004009.3-201ENST00000624160 NEXNQ0ZGT2 675 aa10.48□□□□□ -0.73
AC004009.3-201ENST00000624160 NBPF10Q6P3W6 841 aaKnown RBP10.48□□□□□ -0.73
AC004009.3-201ENST00000624160 ANKRD13DQ6ZTN6 518 aa10.48□□□□□ -0.73
AC004009.3-201ENST00000624160 COPS6Q7L5N1 327 aa10.48□□□□□ -0.73
AC004009.3-201ENST00000624160 NBPF15Q8N660 670 aa10.48□□□□□ -0.73
AC004009.3-201ENST00000624160 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.48□□□□□ -0.73
AC004009.3-201ENST00000624160 PTPRCP08575 1304 aa10.48□□□□□ -0.73
AC004009.3-201ENST00000624160 USP42Q9H9J4 1324 aaKnown RBP10.48□□□□□ -0.73
AC004009.3-201ENST00000624160 UBR3Q6ZT12 1888 aa10.47□□□□□ -0.73
AC004009.3-201ENST00000624160 ARHGAP33O14559 1287 aa10.47□□□□□ -0.73
AC004009.3-201ENST00000624160 POLD1P28340 1107 aa10.47□□□□□ -0.73
AC004009.3-201ENST00000624160 AIMP1Q12904 312 aaKnown RBP10.47□□□□□ -0.73
AC004009.3-201ENST00000624160 FKBP5Q13451 457 aaPredicted RBP10.47□□□□□ -0.73
AC004009.3-201ENST00000624160 VARS2Q5ST30 1063 aaKnown RBP10.47□□□□□ -0.73
AC004009.3-201ENST00000624160 COL23A1Q86Y22 540 aaPredicted RBP10.47□□□□□ -0.73
AC004009.3-201ENST00000624160 PLBD2Q8NHP8 589 aa10.47□□□□□ -0.73
AC004009.3-201ENST00000624160 XAGE3Q8WTP9 111 aa10.47□□□□□ -0.73
AC004009.3-201ENST00000624160 OTUD5Q96G74 571 aa10.47□□□□□ -0.73
AC004009.3-201ENST00000624160 ZBED2Q9BTP6 218 aa10.47□□□□□ -0.73
AC004009.3-201ENST00000624160 MTFR1LQ9H019 292 aa10.47□□□□□ -0.73
AC004009.3-201ENST00000624160 MAP3K15Q6ZN16 1313 aa10.47□□□□□ -0.73
AC004009.3-201ENST00000624160 NPHP1O15259 732 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 776.2 ms