RNA–Protein interactions for RNA: ENST00000623321.3

ATRX-211, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 1 (best)

Gene ATRX, Length 1,860 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-211ENST00000623321 SYNE4Q8N205 404 aa18.45■□□□□ 0.54
ATRX-211ENST00000623321 CHMP3Q9Y3E7 222 aa18.45■□□□□ 0.54
ATRX-211ENST00000623321 CSF1RP07333 972 aa18.44■□□□□ 0.54
ATRX-211ENST00000623321 RFC4P35249 363 aa18.44■□□□□ 0.54
ATRX-211ENST00000623321 PTPN12Q05209 780 aaKnown RBP18.44■□□□□ 0.54
ATRX-211ENST00000623321 BCL2L12Q9HB09 334 aa18.44■□□□□ 0.54
ATRX-211ENST00000623321 SH3TC1Q8TE82 1336 aa18.44■□□□□ 0.54
ATRX-211ENST00000623321 SCN7AQ01118 1682 aa18.44■□□□□ 0.54
ATRX-211ENST00000623321 KLHDC4Q8TBB5 520 aa18.43■□□□□ 0.54
ATRX-211ENST00000623321 IL1RAPL2Q9NP60 686 aa18.43■□□□□ 0.54
ATRX-211ENST00000623321 PHF14O94880 888 aa18.43■□□□□ 0.54
ATRX-211ENST00000623321 GSPT1P15170 499 aaKnown RBP18.43■□□□□ 0.54
ATRX-211ENST00000623321 OTUD7AQ8TE49 926 aaPredicted RBP18.43■□□□□ 0.54
ATRX-211ENST00000623321 SRP68Q9UHB9 627 aaKnown RBP18.43■□□□□ 0.54
ATRX-211ENST00000623321 PDE8AO60658 829 aa18.42■□□□□ 0.54
ATRX-211ENST00000623321 RAB3GAP1Q15042 981 aa18.42■□□□□ 0.54
ATRX-211ENST00000623321 SIL1Q9H173 461 aa18.42■□□□□ 0.54
ATRX-211ENST00000623321 USP42Q9H9J4 1324 aaKnown RBP18.42■□□□□ 0.54
ATRX-211ENST00000623321 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.41■□□□□ 0.54
ATRX-211ENST00000623321 FAM177BA6PVY3 158 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 K7ELQ4 463 aaPredicted RBP18.41■□□□□ 0.54
ATRX-211ENST00000623321 NTSR2O95665 410 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 HSP90B1P14625 803 aaKnown RBP18.41■□□□□ 0.54
ATRX-211ENST00000623321 SSFA2P28290 1259 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 TBC1D9BQ66K14 1250 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 OSBPL3Q9H4L5 887 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 SALL3Q9BXA9 1300 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 SASH1O94885 1247 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 PTMSP20962 102 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 CTSWP56202 376 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 CCDC57Q2TAC2 916 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 TTC22Q5TAA0 569 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 CLASRPQ8N2M8 674 aaKnown RBP18.41■□□□□ 0.54
ATRX-211ENST00000623321 TTLL11Q8NHH1 800 aa18.41■□□□□ 0.54
ATRX-211ENST00000623321 TNPO1Q92973 898 aaKnown RBP18.41■□□□□ 0.54
ATRX-211ENST00000623321 ISY1Q9ULR0 285 aaKnown RBP18.41■□□□□ 0.54
ATRX-211ENST00000623321 TNS1Q9HBL0 1735 aaKnown RBP18.41■□□□□ 0.54
ATRX-211ENST00000623321 PDE1AP54750 535 aa18.4■□□□□ 0.54
ATRX-211ENST00000623321 GBP4Q96PP9 640 aa18.4■□□□□ 0.54
ATRX-211ENST00000623321 SETDB2Q96T68 719 aa18.4■□□□□ 0.54
ATRX-211ENST00000623321 UBR3Q6ZT12 1888 aa18.4■□□□□ 0.54
ATRX-211ENST00000623321 XRCC6P12956 609 aaKnown RBP eCLIP18.39■□□□□ 0.54
ATRX-211ENST00000623321 MX1P20591 662 aa18.39■□□□□ 0.54
ATRX-211ENST00000623321 BICDL1Q6ZP65 573 aa18.39■□□□□ 0.54
ATRX-211ENST00000623321 C4AP0C0L4 1744 aa18.39■□□□□ 0.53
ATRX-211ENST00000623321 CD2BP2O95400 341 aaKnown RBP18.39■□□□□ 0.53
ATRX-211ENST00000623321 IFIT5Q13325 482 aaKnown RBP18.39■□□□□ 0.53
ATRX-211ENST00000623321 STAP2Q9UGK3 403 aa18.39■□□□□ 0.53
ATRX-211ENST00000623321 HCLS1P14317 486 aaPredicted RBP18.37■□□□□ 0.53
ATRX-211ENST00000623321 NUTM1Q86Y26 1132 aa18.37■□□□□ 0.53
ATRX-211ENST00000623321 CCDC85AQ96PX6 553 aaPredicted RBP18.37■□□□□ 0.53
ATRX-211ENST00000623321 NYXQ9GZU5 481 aa18.37■□□□□ 0.53
ATRX-211ENST00000623321 FBXO3Q9UK99 471 aa18.37■□□□□ 0.53
ATRX-211ENST00000623321 RGPD3A6NKT7 1758 aaPredicted RBP18.37■□□□□ 0.53
ATRX-211ENST00000623321 RGPD4Q7Z3J3 1758 aa18.37■□□□□ 0.53
ATRX-211ENST00000623321 MYH3P11055 1940 aa18.37■□□□□ 0.53
ATRX-211ENST00000623321 CIAO1O76071 339 aa18.37■□□□□ 0.53
ATRX-211ENST00000623321 MRE11P49959 708 aa18.37■□□□□ 0.53
ATRX-211ENST00000623321 AKT1S1Q96B36 256 aa18.37■□□□□ 0.53
ATRX-211ENST00000623321 GZF1Q9H116 711 aaPredicted RBP18.37■□□□□ 0.53
ATRX-211ENST00000623321 AOX1Q06278 1338 aa18.36■□□□□ 0.53
ATRX-211ENST00000623321 ANKRD18BA2A2Z9 1011 aa18.36■□□□□ 0.53
ATRX-211ENST00000623321 EYA2O00167 538 aa18.36■□□□□ 0.53
ATRX-211ENST00000623321 ITGA6P23229 1130 aa18.36■□□□□ 0.53
ATRX-211ENST00000623321 IL15P40933 162 aaPredicted RBP18.36■□□□□ 0.53
ATRX-211ENST00000623321 RABEP1Q15276 862 aa18.36■□□□□ 0.53
ATRX-211ENST00000623321 ZNF594Q96JF6 807 aaPredicted RBP18.36■□□□□ 0.53
ATRX-211ENST00000623321 GREM2Q9H772 168 aa18.36■□□□□ 0.53
ATRX-211ENST00000623321 IFIT2P09913 472 aaKnown RBP18.35■□□□□ 0.53
ATRX-211ENST00000623321 SKOR2Q2VWA4 1001 aaPredicted RBP18.35■□□□□ 0.53
ATRX-211ENST00000623321 TAF7LQ5H9L4 462 aa18.35■□□□□ 0.53
ATRX-211ENST00000623321 ATG9AQ7Z3C6 839 aa18.35■□□□□ 0.53
ATRX-211ENST00000623321 TFCP2L1Q9NZI6 479 aa18.35■□□□□ 0.53
ATRX-211ENST00000623321 GTF2E1P29083 439 aaPredicted RBP18.35■□□□□ 0.53
ATRX-211ENST00000623321 ERFEQ4G0M1 354 aa18.35■□□□□ 0.53
ATRX-211ENST00000623321 SLC10A5Q5PT55 438 aa18.35■□□□□ 0.53
ATRX-211ENST00000623321 TPTE2Q6XPS3 522 aa18.35■□□□□ 0.53
ATRX-211ENST00000623321 CLEC17AQ6ZS10 378 aa18.35■□□□□ 0.53
ATRX-211ENST00000623321 AACSQ86V21 672 aa18.35■□□□□ 0.53
ATRX-211ENST00000623321 ANO8Q9HCE9 1232 aaPredicted RBP18.35■□□□□ 0.53
ATRX-211ENST00000623321 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.35■□□□□ 0.53
ATRX-211ENST00000623321 HSP90AA1P07900 732 aaKnown RBP18.34■□□□□ 0.53
ATRX-211ENST00000623321 TFCP2Q12800 502 aa18.34■□□□□ 0.53
ATRX-211ENST00000623321 ZNF827Q17R98 1081 aa18.34■□□□□ 0.53
ATRX-211ENST00000623321 NBPF5PQ86XG9 351 aaPredicted RBP18.34■□□□□ 0.53
ATRX-211ENST00000623321 EAF2Q96CJ1 260 aaPredicted RBP18.34■□□□□ 0.53
ATRX-211ENST00000623321 COL24A1Q17RW2 1714 aa18.34■□□□□ 0.53
ATRX-211ENST00000623321 DDX60Q8IY21 1712 aaKnown RBP18.34■□□□□ 0.53
ATRX-211ENST00000623321 GYS1P13807 737 aa18.33■□□□□ 0.53
ATRX-211ENST00000623321 CCDC152Q4G0S7 254 aa18.33■□□□□ 0.53
ATRX-211ENST00000623321 LRRC24Q50LG9 513 aa18.33■□□□□ 0.53
ATRX-211ENST00000623321 TTC41PQ6P2S7 1318 aa18.33■□□□□ 0.52
ATRX-211ENST00000623321 LAMB2P55268 1798 aa18.33■□□□□ 0.52
ATRX-211ENST00000623321 NFIXQ14938 502 aa18.33■□□□□ 0.52
ATRX-211ENST00000623321 FLAD1Q8NFF5 587 aa18.33■□□□□ 0.52
ATRX-211ENST00000623321 CAMKK2Q96RR4 588 aa18.33■□□□□ 0.52
ATRX-211ENST00000623321 USP26Q9BXU7 913 aa18.33■□□□□ 0.52
ATRX-211ENST00000623321 PUS3Q9BZE2 481 aaKnown RBP18.33■□□□□ 0.52
ATRX-211ENST00000623321 TNNI3KQ59H18 835 aa18.32■□□□□ 0.52
ATRX-211ENST00000623321 TSHZ3Q63HK5 1081 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms