RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 CCZ1BP86790 482 aa25.52■■□□□ 1.68
PCSK6-220ENST00000622483 CCZ1P86791 482 aaPredicted RBP25.52■■□□□ 1.68
PCSK6-220ENST00000622483 FAM177A1Q8N128 213 aaPredicted RBP25.52■■□□□ 1.68
PCSK6-220ENST00000622483 FAM53CQ9NYF3 392 aa25.52■■□□□ 1.68
PCSK6-220ENST00000622483 CYP46A1Q9Y6A2 500 aa25.52■■□□□ 1.68
PCSK6-220ENST00000622483 SNW1Q13573 536 aaKnown RBP25.52■■□□□ 1.68
PCSK6-220ENST00000622483 CLSTN2Q9H4D0 955 aa25.52■■□□□ 1.68
PCSK6-220ENST00000622483 CCT4P50991 539 aaKnown RBP25.51■■□□□ 1.67
PCSK6-220ENST00000622483 CHRNA2Q15822 529 aa25.51■■□□□ 1.67
PCSK6-220ENST00000622483 TAF7LQ5H9L4 462 aa25.51■■□□□ 1.67
PCSK6-220ENST00000622483 FMNL2Q96PY5 1086 aa25.51■■□□□ 1.67
PCSK6-220ENST00000622483 ATP8B2P98198 1209 aa25.51■■□□□ 1.67
PCSK6-220ENST00000622483 SMARCE1Q969G3 411 aa25.51■■□□□ 1.67
PCSK6-220ENST00000622483 NFATC2IPQ8NCF5 419 aa25.5■■□□□ 1.67
PCSK6-220ENST00000622483 RAB11FIP3O75154 756 aa25.5■■□□□ 1.67
PCSK6-220ENST00000622483 PTPN21Q16825 1174 aa25.5■■□□□ 1.67
PCSK6-220ENST00000622483 HOMER1Q86YM7 354 aa25.5■■□□□ 1.67
PCSK6-220ENST00000622483 ARHGAP30Q7Z6I6 1101 aaPredicted RBP25.5■■□□□ 1.67
PCSK6-220ENST00000622483 SSH2Q76I76 1423 aa25.49■■□□□ 1.67
PCSK6-220ENST00000622483 STAP2Q9UGK3 403 aa25.49■■□□□ 1.67
PCSK6-220ENST00000622483 TAF6LQ9Y6J9 622 aa25.49■■□□□ 1.67
PCSK6-220ENST00000622483 PI4K2BQ8TCG2 481 aa25.48■■□□□ 1.67
PCSK6-220ENST00000622483 KIF20BQ96Q89 1820 aa25.48■■□□□ 1.67
PCSK6-220ENST00000622483 HOXC9P31274 260 aa25.48■■□□□ 1.67
PCSK6-220ENST00000622483 JAK2O60674 1132 aa25.47■■□□□ 1.67
PCSK6-220ENST00000622483 DDX19AQ9NUU7 478 aaKnown RBP25.47■■□□□ 1.67
PCSK6-220ENST00000622483 OVOS2A0A0J9YW53 1432 aa25.47■■□□□ 1.67
PCSK6-220ENST00000622483 OVOS2Q6IE36 1432 aa25.47■■□□□ 1.67
PCSK6-220ENST00000622483 ADGRL3Q9HAR2 1447 aa25.47■■□□□ 1.67
PCSK6-220ENST00000622483 HTATSF1O43719 755 aaKnown RBP25.47■■□□□ 1.67
PCSK6-220ENST00000622483 PPP1R42Q7Z4L9 355 aa25.47■■□□□ 1.67
PCSK6-220ENST00000622483 XRN1Q8IZH2 1706 aaKnown RBP25.46■■□□□ 1.67
PCSK6-220ENST00000622483 H2AFXP16104 143 aaPredicted RBP25.46■■□□□ 1.67
PCSK6-220ENST00000622483 CNTROBQ8N137 903 aa25.46■■□□□ 1.67
PCSK6-220ENST00000622483 STK31Q9BXU1 1019 aa25.46■■□□□ 1.67
PCSK6-220ENST00000622483 FLIIQ13045 1269 aa25.46■■□□□ 1.67
PCSK6-220ENST00000622483 OS9Q13438 667 aaPredicted RBP25.46■■□□□ 1.67
PCSK6-220ENST00000622483 IQCB1Q15051 598 aa25.46■■□□□ 1.67
PCSK6-220ENST00000622483 AOPEPQ8N6M6 819 aa25.46■■□□□ 1.67
PCSK6-220ENST00000622483 TTC21AQ8NDW8 1320 aa25.46■■□□□ 1.67
PCSK6-220ENST00000622483 GCP02774 474 aa25.46■■□□□ 1.67
PCSK6-220ENST00000622483 CCDC191Q8NCU4 936 aa25.46■■□□□ 1.67
PCSK6-220ENST00000622483 DNAI1Q9UI46 699 aa25.46■■□□□ 1.67
PCSK6-220ENST00000622483 E4F1Q66K89 784 aaPredicted RBP25.45■■□□□ 1.66
PCSK6-220ENST00000622483 NALCNQ8IZF0 1738 aa25.45■■□□□ 1.66
PCSK6-220ENST00000622483 NPHP3Q7Z494 1330 aa25.45■■□□□ 1.66
PCSK6-220ENST00000622483 TMCO3Q6UWJ1 677 aa25.45■■□□□ 1.66
PCSK6-220ENST00000622483 RHPN1Q8TCX5 695 aa25.45■■□□□ 1.66
PCSK6-220ENST00000622483 ITSN1Q15811 1721 aa25.44■■□□□ 1.66
PCSK6-220ENST00000622483 UBTFL1P0CB47 393 aaPredicted RBP25.44■■□□□ 1.66
PCSK6-220ENST00000622483 SLC20A2Q08357 652 aa25.44■■□□□ 1.66
PCSK6-220ENST00000622483 MTHFSDQ2M296 383 aaKnown RBP25.44■■□□□ 1.66
PCSK6-220ENST00000622483 AXIN2Q9Y2T1 843 aa25.44■■□□□ 1.66
PCSK6-220ENST00000622483 DLG5Q8TDM6 1919 aa25.44■■□□□ 1.66
PCSK6-220ENST00000622483 SRGAP3O43295 1099 aa25.44■■□□□ 1.66
PCSK6-220ENST00000622483 SMC2O95347 1197 aa25.43■■□□□ 1.66
PCSK6-220ENST00000622483 SCAND2PQ9GZW5 306 aaPredicted RBP25.43■■□□□ 1.66
PCSK6-220ENST00000622483 GNAI3P08754 354 aa25.43■■□□□ 1.66
PCSK6-220ENST00000622483 VPS53Q5VIR6 699 aa25.43■■□□□ 1.66
PCSK6-220ENST00000622483 UBXN4Q92575 508 aa25.43■■□□□ 1.66
PCSK6-220ENST00000622483 PPP1R13BQ96KQ4 1090 aa25.43■■□□□ 1.66
PCSK6-220ENST00000622483 HAP1P54257 671 aaPredicted RBP25.42■■□□□ 1.66
PCSK6-220ENST00000622483 GNL2Q13823 731 aaKnown RBP25.42■■□□□ 1.66
PCSK6-220ENST00000622483 TEX35Q5T0J7 233 aa25.42■■□□□ 1.66
PCSK6-220ENST00000622483 SOS1Q07889 1333 aaPredicted RBP25.42■■□□□ 1.66
PCSK6-220ENST00000622483 TOMM22Q9NS69 142 aa25.42■■□□□ 1.66
PCSK6-220ENST00000622483 TAOK2Q9UL54 1235 aa25.42■■□□□ 1.66
PCSK6-220ENST00000622483 URI1O94763 535 aaPredicted RBP25.41■■□□□ 1.66
PCSK6-220ENST00000622483 OAS2P29728 719 aaKnown RBP25.41■■□□□ 1.66
PCSK6-220ENST00000622483 GOLGA8FQ08AF8 430 aa25.41■■□□□ 1.66
PCSK6-220ENST00000622483 GOLGA8DPQ0D2H9 430 aa25.41■■□□□ 1.66
PCSK6-220ENST00000622483 NBPF6Q5VWK0 638 aa25.41■■□□□ 1.66
PCSK6-220ENST00000622483 TMC6Q7Z403 805 aa25.41■■□□□ 1.66
PCSK6-220ENST00000622483 NBPF4Q96M43 638 aa25.41■■□□□ 1.66
PCSK6-220ENST00000622483 USP44Q9H0E7 712 aa25.41■■□□□ 1.66
PCSK6-220ENST00000622483 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.41■■□□□ 1.665e-6■■■■□ 23.6
PCSK6-220ENST00000622483 CHD2O14647 1828 aaKnown RBP25.41■■□□□ 1.66
PCSK6-220ENST00000622483 AATKQ6ZMQ8 1374 aa25.41■■□□□ 1.66
PCSK6-220ENST00000622483 ANKRD65E5RJM6 399 aa25.41■■□□□ 1.66
PCSK6-220ENST00000622483 FAM227BQ96M60 508 aa25.41■■□□□ 1.66
PCSK6-220ENST00000622483 SH2B1Q9NRF2 756 aaPredicted RBP25.41■■□□□ 1.66
PCSK6-220ENST00000622483 SASH3O75995 380 aa25.4■■□□□ 1.66
PCSK6-220ENST00000622483 ISM2Q6H9L7 571 aa25.4■■□□□ 1.66
PCSK6-220ENST00000622483 RASSF4Q9H2L5 321 aa25.4■■□□□ 1.66
PCSK6-220ENST00000622483 RBM8AQ9Y5S9 174 aaKnown RBP25.4■■□□□ 1.66
PCSK6-220ENST00000622483 ZSCAN26Q16670 478 aa25.4■■□□□ 1.66
PCSK6-220ENST00000622483 SLFNL1Q499Z3 407 aa25.4■■□□□ 1.66
PCSK6-220ENST00000622483 MNS1Q8NEH6 495 aa25.4■■□□□ 1.66
PCSK6-220ENST00000622483 MYO1CO00159 1063 aa25.39■■□□□ 1.66
PCSK6-220ENST00000622483 LMAN1P49257 510 aa25.39■■□□□ 1.66
PCSK6-220ENST00000622483 CARD6Q9BX69 1037 aa25.39■■□□□ 1.66
PCSK6-220ENST00000622483 ZSWIM6Q9HCJ5 1215 aa25.39■■□□□ 1.66
PCSK6-220ENST00000622483 BIN1O00499 593 aa25.39■■□□□ 1.66
PCSK6-220ENST00000622483 ZKSCAN1P17029 563 aaPredicted RBP25.39■■□□□ 1.66
PCSK6-220ENST00000622483 ZSCAN31Q96LW9 406 aaPredicted RBP25.39■■□□□ 1.66
PCSK6-220ENST00000622483 IL17RAQ96F46 866 aa25.38■■□□□ 1.65
PCSK6-220ENST00000622483 MRFAP1L1Q96HT8 127 aa25.38■■□□□ 1.65
PCSK6-220ENST00000622483 LRRC2Q9BYS8 371 aa25.38■■□□□ 1.65
PCSK6-220ENST00000622483 MON2Q7Z3U7 1717 aa25.38■■□□□ 1.65
PCSK6-220ENST00000622483 H3BQV1 296 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms