RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 TBCAO75347 108 aaKnown RBP11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 IL15P40933 162 aaPredicted RBP11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 UBA7P41226 1012 aa11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 GUCY1B3Q02153 619 aa11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 ENOX2Q16206 610 aaKnown RBP11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 KRT23Q9C075 422 aa11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 TBX22Q9Y458 520 aa11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 MAGI3Q5TCQ9 1506 aa11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 TCERG1LQ5VWI1 586 aa11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 CCDC144CPQ8IYA2 1237 aa11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 SMARCC2Q8TAQ2 1214 aa11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 USP16Q9Y5T5 823 aa11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 IRS4O14654 1257 aaPredicted RBP11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 NBPF7P0C2Y1 421 aaPredicted RBP11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 CFAP100Q494V2 611 aa11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 UBE2Q2Q8WVN8 375 aa11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 ABCA8O94911 1581 aa11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 GNAQP50148 359 aa11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 METAP2P50579 478 aaKnown RBP eCLIP11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 CCT2P78371 535 aaKnown RBP11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 SPA17Q15506 151 aa11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 CCDC112Q8NEF3 446 aa11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 LRRC27Q9C0I9 530 aa11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 MAPKBP1O60336 1514 aa11.29□□□□□ -0.6
CLTCL1-211ENST00000621271 H0YIN7 160 aa11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 WTAPQ15007 396 aa11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 KSR2Q6VAB6 950 aa11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 TBC1D2Q9BYX2 928 aa11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 CWC15Q9P013 229 aaKnown RBP11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 ALDH1L1O75891 902 aa11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 CCDC87Q9NVE4 849 aa11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 FLT4P35916 1363 aa11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 FBLN1P23142 703 aa11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 SCAND2PQ9GZW5 306 aaPredicted RBP11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 PICK1Q9NRD5 415 aa11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 GRM8O00222 908 aa11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 LDHBP07195 334 aaKnown RBP11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 IFIT1BQ5T764 474 aaKnown RBP11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 TAX1BP1Q86VP1 789 aa11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 CCDC191Q8NCU4 936 aa11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 CCDC148Q8NFR7 591 aa11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 SH2D4AQ9H788 454 aa11.28□□□□□ -0.6
CLTCL1-211ENST00000621271 USP8P40818 1118 aa11.27□□□□□ -0.6
CLTCL1-211ENST00000621271 ARHGAP29Q52LW3 1261 aa11.27□□□□□ -0.6
CLTCL1-211ENST00000621271 USP37Q86T82 979 aa11.27□□□□□ -0.6
CLTCL1-211ENST00000621271 FAM177A1Q8N128 213 aaPredicted RBP11.27□□□□□ -0.6
CLTCL1-211ENST00000621271 TMTC2Q8N394 836 aa11.27□□□□□ -0.6
CLTCL1-211ENST00000621271 LARGE2Q8N3Y3 721 aa11.27□□□□□ -0.6
CLTCL1-211ENST00000621271 CNNM2Q9H8M5 875 aa11.27□□□□□ -0.6
CLTCL1-211ENST00000621271 WDR70Q9NW82 654 aa11.27□□□□□ -0.6
CLTCL1-211ENST00000621271 NOD1Q9Y239 953 aa11.27□□□□□ -0.6
CLTCL1-211ENST00000621271 PLCD3Q8N3E9 789 aa11.27□□□□□ -0.61
CLTCL1-211ENST00000621271 PUF60Q9UHX1 559 aaKnown RBP11.27□□□□□ -0.61
CLTCL1-211ENST00000621271 NKTRP30414 1462 aaKnown RBP11.27□□□□□ -0.61
CLTCL1-211ENST00000621271 CTNNA2P26232 953 aa11.27□□□□□ -0.61
CLTCL1-211ENST00000621271 PDE6BP35913 854 aa11.27□□□□□ -0.61
CLTCL1-211ENST00000621271 CCDC40Q4G0X9 1142 aa11.27□□□□□ -0.61
CLTCL1-211ENST00000621271 TTC16Q8NEE8 873 aa11.27□□□□□ -0.61
CLTCL1-211ENST00000621271 PYM1Q9BRP8 204 aaKnown RBP11.27□□□□□ -0.61
CLTCL1-211ENST00000621271 COMMD10Q9Y6G5 202 aa11.27□□□□□ -0.61
CLTCL1-211ENST00000621271 MACROD2A1Z1Q3 448 aa11.27□□□□□ -0.61
CLTCL1-211ENST00000621271 SLC26A6Q9BXS9 759 aa11.27□□□□□ -0.61
CLTCL1-211ENST00000621271 ZFYVE16Q7Z3T8 1539 aa11.26□□□□□ -0.61
CLTCL1-211ENST00000621271 MAGEB6P1A0A0J9YX57 407 aa11.26□□□□□ -0.61
CLTCL1-211ENST00000621271 MCM5P33992 734 aa11.26□□□□□ -0.61
CLTCL1-211ENST00000621271 BRDTQ58F21 947 aaPredicted RBP11.26□□□□□ -0.61
CLTCL1-211ENST00000621271 HOOK2Q96ED9 719 aa11.26□□□□□ -0.61
CLTCL1-211ENST00000621271 STX6O43752 255 aa11.26□□□□□ -0.61
CLTCL1-211ENST00000621271 MAP3K11Q16584 847 aa11.26□□□□□ -0.61
CLTCL1-211ENST00000621271 SLC9C2Q5TAH2 1124 aa11.26□□□□□ -0.61
CLTCL1-211ENST00000621271 C6orf50Q9HD87 102 aa11.26□□□□□ -0.61
CLTCL1-211ENST00000621271 SLAIN2Q9P270 581 aa11.26□□□□□ -0.61
CLTCL1-211ENST00000621271 TCHPQ9BT92 498 aa11.26□□□□□ -0.61
CLTCL1-211ENST00000621271 TMOD4Q9NZQ9 345 aa11.26□□□□□ -0.61
CLTCL1-211ENST00000621271 CNNM3Q8NE01 707 aa11.26□□□□□ -0.61
CLTCL1-211ENST00000621271 SUPT20HQ8NEM7 779 aa11.26□□□□□ -0.61
CLTCL1-211ENST00000621271 FERMT1Q9BQL6 677 aa11.26□□□□□ -0.61
CLTCL1-211ENST00000621271 IVNS1ABPQ9Y6Y0 642 aa11.26□□□□□ -0.61
CLTCL1-211ENST00000621271 PABPN1LA6NDY0 278 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 SPDYE3A6NKU9 549 aa11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 EIF4A2Q14240 407 aaKnown RBP11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 FILIP1Q7Z7B0 1213 aa11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 MCM9Q9NXL9 1143 aa11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 HMG20BQ9P0W2 317 aa11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 ORC3Q9UBD5 711 aaPredicted RBP11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 LIMCH1Q9UPQ0 1083 aa11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 TRPM2O94759 1503 aa11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 UFL1O94874 794 aa11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 TAF12Q16514 161 aa11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 PARP10Q53GL7 1025 aa11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 LRSAM1Q6UWE0 723 aa11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 NEK1Q96PY6 1258 aa11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 CENPHQ9H3R5 247 aa11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 HEATR3Q7Z4Q2 680 aa11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 TTC6Q86TZ1 520 aa11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 IL16Q14005 1332 aa11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 TCIRG1Q13488 830 aa11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 TRAPPC8Q9Y2L5 1435 aa11.25□□□□□ -0.61
CLTCL1-211ENST00000621271 TRIM27P14373 513 aa11.24□□□□□ -0.61
CLTCL1-211ENST00000621271 MPNDQ8N594 471 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms