RNA–Protein interactions for RNA: ENST00000620466.4

ALMS1-208, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 2

Gene ALMS1, Length 6,720 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-208ENST00000620466 IQGAP3Q86VI3 1631 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 EPB41L2O43491 1005 aaKnown RBP9.67□□□□□ -0.86
ALMS1-208ENST00000620466 GSPT1P15170 499 aaKnown RBP9.67□□□□□ -0.86
ALMS1-208ENST00000620466 ISM2Q6H9L7 571 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 IFNL2Q8IZJ0 200 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 SNRKQ9NRH2 765 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 KIF1BO60333 1816 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 KIF24Q5T7B8 1368 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 URI1O94763 535 aaPredicted RBP9.67□□□□□ -0.86
ALMS1-208ENST00000620466 XAGE3Q8WTP9 111 aa9.67□□□□□ -0.86
ALMS1-208ENST00000620466 LRRIQ1Q96JM4 1722 aa9.66□□□□□ -0.86
ALMS1-208ENST00000620466 EIF3JO75822 258 aaKnown RBP9.66□□□□□ -0.86
ALMS1-208ENST00000620466 ANKRD13DQ6ZTN6 518 aa9.66□□□□□ -0.86
ALMS1-208ENST00000620466 CCDC191Q8NCU4 936 aa9.66□□□□□ -0.86
ALMS1-208ENST00000620466 DNAJC25Q9H1X3 360 aa9.66□□□□□ -0.86
ALMS1-208ENST00000620466 SNRPA1P09661 255 aaKnown RBP9.66□□□□□ -0.86
ALMS1-208ENST00000620466 CPA1P15085 419 aa9.66□□□□□ -0.86
ALMS1-208ENST00000620466 HOXC9P31274 260 aa9.66□□□□□ -0.86
ALMS1-208ENST00000620466 MCMDC2Q4G0Z9 681 aa9.66□□□□□ -0.86
ALMS1-208ENST00000620466 AXDND1Q5T1B0 1012 aaPredicted RBP9.66□□□□□ -0.86
ALMS1-208ENST00000620466 CCDC186Q7Z3E2 898 aa9.66□□□□□ -0.86
ALMS1-208ENST00000620466 SNW1Q13573 536 aaKnown RBP9.66□□□□□ -0.86
ALMS1-208ENST00000620466 CWF19L2Q2TBE0 894 aaKnown RBP9.66□□□□□ -0.86
ALMS1-208ENST00000620466 PAXBP1Q9Y5B6 917 aa9.66□□□□□ -0.86
ALMS1-208ENST00000620466 MINDY4BA8MYZ0 360 aa9.66□□□□□ -0.86
ALMS1-208ENST00000620466 CHL1O00533 1208 aa9.66□□□□□ -0.86
ALMS1-208ENST00000620466 SSBP05455 408 aaKnown RBP eCLIP9.66□□□□□ -0.86
ALMS1-208ENST00000620466 ENOX2Q16206 610 aaKnown RBP9.66□□□□□ -0.86
ALMS1-208ENST00000620466 KLHL10Q6JEL2 608 aa9.66□□□□□ -0.86
ALMS1-208ENST00000620466 TXLNBQ8N3L3 684 aa9.66□□□□□ -0.86
ALMS1-208ENST00000620466 LRRC59Q96AG4 307 aaKnown RBP9.66□□□□□ -0.86
ALMS1-208ENST00000620466 ORC3Q9UBD5 711 aaPredicted RBP9.66□□□□□ -0.86
ALMS1-208ENST00000620466 DESP17661 470 aa9.65□□□□□ -0.86
ALMS1-208ENST00000620466 TYRO3Q06418 890 aa9.65□□□□□ -0.86
ALMS1-208ENST00000620466 LMBRD1Q9NUN5 540 aa9.65□□□□□ -0.86
ALMS1-208ENST00000620466 MAP3K19Q56UN5 1328 aa9.65□□□□□ -0.86
ALMS1-208ENST00000620466 ANKRD18BA2A2Z9 1011 aa9.65□□□□□ -0.86
ALMS1-208ENST00000620466 ZNF445P59923 1031 aa9.65□□□□□ -0.86
ALMS1-208ENST00000620466 SLC39A6Q13433 755 aa9.65□□□□□ -0.86
ALMS1-208ENST00000620466 NCOA7Q8NI08 942 aa9.65□□□□□ -0.86
ALMS1-208ENST00000620466 GOLGA6L10A6NI86 522 aa9.65□□□□□ -0.86
ALMS1-208ENST00000620466 H0YHG0 523 aa9.65□□□□□ -0.86
ALMS1-208ENST00000620466 IFIT3O14879 490 aaKnown RBP9.65□□□□□ -0.86
ALMS1-208ENST00000620466 CCDC82Q8N4S0 544 aa9.65□□□□□ -0.86
ALMS1-208ENST00000620466 LUC7LQ9NQ29 371 aaKnown RBP9.65□□□□□ -0.86
ALMS1-208ENST00000620466 ABCF2Q9UG63 623 aa9.65□□□□□ -0.86
ALMS1-208ENST00000620466 SNX14Q9Y5W7 946 aa9.65□□□□□ -0.86
ALMS1-208ENST00000620466 CAVIN2O95810 425 aa9.65□□□□□ -0.86
ALMS1-208ENST00000620466 ARHGAP29Q52LW3 1261 aa9.65□□□□□ -0.86
ALMS1-208ENST00000620466 COPS6Q7L5N1 327 aa9.65□□□□□ -0.86
ALMS1-208ENST00000620466 PLA2R1Q13018 1463 aa9.65□□□□□ -0.86
ALMS1-208ENST00000620466 CCDC171Q6TFL3 1326 aa9.65□□□□□ -0.87
ALMS1-208ENST00000620466 SYT1P21579 422 aa9.65□□□□□ -0.87
ALMS1-208ENST00000620466 CCDC150Q8NCX0 1101 aa9.65□□□□□ -0.87
ALMS1-208ENST00000620466 METAP2P50579 478 aaKnown RBP eCLIP9.64□□□□□ -0.87
ALMS1-208ENST00000620466 MAP3K12Q12852 859 aa9.64□□□□□ -0.87
ALMS1-208ENST00000620466 SBNO2Q9Y2G9 1366 aa9.64□□□□□ -0.87
ALMS1-208ENST00000620466 ZPR1O75312 459 aa9.64□□□□□ -0.87
ALMS1-208ENST00000620466 SLC5A1P13866 664 aa9.64□□□□□ -0.87
ALMS1-208ENST00000620466 TMOD2Q9NZR1 351 aa9.64□□□□□ -0.87
ALMS1-208ENST00000620466 FAM193AP78312 1265 aa9.64□□□□□ -0.87
ALMS1-208ENST00000620466 BICC1Q9H694 974 aaKnown RBP9.64□□□□□ -0.87
ALMS1-208ENST00000620466 AOX1Q06278 1338 aa9.64□□□□□ -0.87
ALMS1-208ENST00000620466 KLF18A0A0U1RQI7 1052 aa9.64□□□□□ -0.87
ALMS1-208ENST00000620466 TRIM21P19474 475 aaKnown RBP9.64□□□□□ -0.87
ALMS1-208ENST00000620466 KIAA1328Q86T90 577 aa9.64□□□□□ -0.87
ALMS1-208ENST00000620466 CFAP74Q9C0B2 1584 aa9.64□□□□□ -0.87
ALMS1-208ENST00000620466 USP19O94966 1318 aa9.64□□□□□ -0.87
ALMS1-208ENST00000620466 PNMA6EA0A0J9YXQ4 647 aa9.64□□□□□ -0.87
ALMS1-208ENST00000620466 TRMT112Q9UI30 125 aaKnown RBP9.64□□□□□ -0.87
ALMS1-208ENST00000620466 ZNF652Q9Y2D9 606 aa9.64□□□□□ -0.87
ALMS1-208ENST00000620466 CHMP4BP1P59074 171 aa9.64□□□□□ -0.87
ALMS1-208ENST00000620466 TTF1Q15361 905 aaPredicted RBP9.64□□□□□ -0.87
ALMS1-208ENST00000620466 TMEM67Q5HYA8 995 aa9.64□□□□□ -0.87
ALMS1-208ENST00000620466 CCDC102AQ96A19 550 aa9.64□□□□□ -0.87
ALMS1-208ENST00000620466 ZCCHC11Q5TAX3 1644 aaKnown RBP9.63□□□□□ -0.87
ALMS1-208ENST00000620466 SBNO1A3KN83 1393 aa9.63□□□□□ -0.87
ALMS1-208ENST00000620466 CCDC196A0A1B0GTZ2 297 aa9.63□□□□□ -0.87
ALMS1-208ENST00000620466 PTGS1P23219 599 aa9.63□□□□□ -0.87
ALMS1-208ENST00000620466 GBP2P32456 591 aaPredicted RBP9.63□□□□□ -0.87
ALMS1-208ENST00000620466 AOPEPQ8N6M6 819 aa9.63□□□□□ -0.87
ALMS1-208ENST00000620466 CCDC148Q8NFR7 591 aa9.63□□□□□ -0.87
ALMS1-208ENST00000620466 SEC63Q9UGP8 760 aaKnown RBP9.63□□□□□ -0.87
ALMS1-208ENST00000620466 KIF5CO60282 957 aa9.63□□□□□ -0.87
ALMS1-208ENST00000620466 GPTP24298 496 aa9.63□□□□□ -0.87
ALMS1-208ENST00000620466 IARSP41252 1262 aaKnown RBP9.63□□□□□ -0.87
ALMS1-208ENST00000620466 TFCP2Q12800 502 aa9.63□□□□□ -0.87
ALMS1-208ENST00000620466 CLASP1Q7Z460 1538 aa9.63□□□□□ -0.87
ALMS1-208ENST00000620466 GADD45BO75293 160 aaPredicted RBP9.63□□□□□ -0.87
ALMS1-208ENST00000620466 EIF5P55010 431 aaKnown RBP9.63□□□□□ -0.87
ALMS1-208ENST00000620466 TNIP1Q15025 636 aa9.63□□□□□ -0.87
ALMS1-208ENST00000620466 CPLX3Q8WVH0 158 aa9.63□□□□□ -0.87
ALMS1-208ENST00000620466 UNC13BO14795 1591 aa9.63□□□□□ -0.87
ALMS1-208ENST00000620466 CFAP65Q6ZU64 1925 aaKnown RBP9.63□□□□□ -0.87
ALMS1-208ENST00000620466 MICU3Q86XE3 530 aa9.63□□□□□ -0.87
ALMS1-208ENST00000620466 MRPS27Q92552 414 aaKnown RBP9.63□□□□□ -0.87
ALMS1-208ENST00000620466 SCLT1Q96NL6 688 aa9.63□□□□□ -0.87
ALMS1-208ENST00000620466 SLC26A6Q9BXS9 759 aa9.63□□□□□ -0.87
ALMS1-208ENST00000620466 BMP2KQ9NSY1 1161 aaPredicted RBP9.63□□□□□ -0.87
ALMS1-208ENST00000620466 APOBRQ0VD83 1088 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms