RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 C14orf37Q86TY3 774 aa12.18□□□□□ -0.46
VPS11-207ENST00000620429 NGDNQ8NEJ9 315 aaKnown RBP12.18□□□□□ -0.46
VPS11-207ENST00000620429 MST1RQ04912 1400 aa12.18□□□□□ -0.46
VPS11-207ENST00000620429 KIF2AO00139 706 aaPredicted RBP12.18□□□□□ -0.46
VPS11-207ENST00000620429 MCM2P49736 904 aa12.18□□□□□ -0.46
VPS11-207ENST00000620429 RPAP2Q8IXW5 612 aaPredicted RBP12.18□□□□□ -0.46
VPS11-207ENST00000620429 L2HGDHQ9H9P8 463 aa12.18□□□□□ -0.46
VPS11-207ENST00000620429 KIF24Q5T7B8 1368 aa12.18□□□□□ -0.46
VPS11-207ENST00000620429 KIF3CO14782 793 aa12.17□□□□□ -0.46
VPS11-207ENST00000620429 UBE2HP62256 183 aa12.17□□□□□ -0.46
VPS11-207ENST00000620429 E2F4Q16254 413 aa12.17□□□□□ -0.46
VPS11-207ENST00000620429 CEP85Q6P2H3 762 aa12.17□□□□□ -0.46
VPS11-207ENST00000620429 KCND1Q9NSA2 647 aa12.17□□□□□ -0.46
VPS11-207ENST00000620429 ARGLU1Q9NWB6 273 aaPredicted RBP12.17□□□□□ -0.46
VPS11-207ENST00000620429 SH3BP1Q9Y3L3 701 aa12.17□□□□□ -0.46
VPS11-207ENST00000620429 NRKQ7Z2Y5 1582 aa12.17□□□□□ -0.46
VPS11-207ENST00000620429 TOPAZ1Q8N9V7 1692 aa12.17□□□□□ -0.46
VPS11-207ENST00000620429 RPS6KA5O75582 802 aa12.17□□□□□ -0.46
VPS11-207ENST00000620429 TCHHQ07283 1943 aa12.17□□□□□ -0.46
VPS11-207ENST00000620429 TMCO3Q6UWJ1 677 aa12.17□□□□□ -0.46
VPS11-207ENST00000620429 TMX3Q96JJ7 454 aa12.17□□□□□ -0.46
VPS11-207ENST00000620429 EIF3CLB5ME19 914 aaKnown RBP12.17□□□□□ -0.46
VPS11-207ENST00000620429 CALRP27797 417 aaKnown RBP12.17□□□□□ -0.46
VPS11-207ENST00000620429 LRCH2Q5VUJ6 765 aa12.17□□□□□ -0.46
VPS11-207ENST00000620429 EIF3CQ99613 913 aaKnown RBP12.17□□□□□ -0.46
VPS11-207ENST00000620429 PLCD4Q9BRC7 762 aa12.17□□□□□ -0.46
VPS11-207ENST00000620429 NALCNQ8IZF0 1738 aa12.16□□□□□ -0.46
VPS11-207ENST00000620429 SSH2Q76I76 1423 aa12.16□□□□□ -0.46
VPS11-207ENST00000620429 ATP10DQ9P241 1426 aa12.16□□□□□ -0.46
VPS11-207ENST00000620429 RPAP1Q9BWH6 1393 aaPredicted RBP12.16□□□□□ -0.46
VPS11-207ENST00000620429 MAP3K19Q56UN5 1328 aa12.16□□□□□ -0.46
VPS11-207ENST00000620429 CORO7P57737 925 aa12.16□□□□□ -0.46
VPS11-207ENST00000620429 KRT24Q2M2I5 525 aa12.16□□□□□ -0.46
VPS11-207ENST00000620429 ERCC6LQ2NKX8 1250 aa12.16□□□□□ -0.46
VPS11-207ENST00000620429 FILIP1Q7Z7B0 1213 aa12.16□□□□□ -0.46
VPS11-207ENST00000620429 PLA2G4DQ86XP0 818 aa12.16□□□□□ -0.46
VPS11-207ENST00000620429 FAM200AQ8TCP9 573 aa12.16□□□□□ -0.46
VPS11-207ENST00000620429 GDPD2Q9HCC8 539 aa12.16□□□□□ -0.46
VPS11-207ENST00000620429 PEAK1Q9H792 1746 aa12.16□□□□□ -0.46
VPS11-207ENST00000620429 NEMFO60524 1076 aa12.16□□□□□ -0.46
VPS11-207ENST00000620429 OAS2P29728 719 aaKnown RBP12.16□□□□□ -0.46
VPS11-207ENST00000620429 C11orf91Q3C1V1 193 aa12.16□□□□□ -0.46
VPS11-207ENST00000620429 NOL8Q76FK4 1167 aaKnown RBP12.16□□□□□ -0.46
VPS11-207ENST00000620429 MCM10Q7L590 875 aa12.16□□□□□ -0.46
VPS11-207ENST00000620429 LRRC59Q96AG4 307 aaKnown RBP12.16□□□□□ -0.46
VPS11-207ENST00000620429 ZSCAN16Q9H4T2 348 aaPredicted RBP12.16□□□□□ -0.46
VPS11-207ENST00000620429 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.16□□□□□ -0.46
VPS11-207ENST00000620429 WDR33Q9C0J8 1336 aaKnown RBP12.15□□□□□ -0.46
VPS11-207ENST00000620429 FOXD4L6Q3SYB3 417 aaPredicted RBP12.15□□□□□ -0.46
VPS11-207ENST00000620429 FOXD4L3Q6VB84 417 aaPredicted RBP12.15□□□□□ -0.46
VPS11-207ENST00000620429 CACTINQ8WUQ7 758 aaKnown RBP12.15□□□□□ -0.46
VPS11-207ENST00000620429 CCDC192P0DO97 292 aa12.15□□□□□ -0.47
VPS11-207ENST00000620429 SEMA3FQ13275 785 aa12.15□□□□□ -0.47
VPS11-207ENST00000620429 MEX3CQ5U5Q3 659 aaKnown RBP12.15□□□□□ -0.47
VPS11-207ENST00000620429 TACO1Q9BSH4 297 aaKnown RBP12.15□□□□□ -0.47
VPS11-207ENST00000620429 BSDC1Q9NW68 430 aaPredicted RBP12.15□□□□□ -0.47
VPS11-207ENST00000620429 FOXO3O43524 673 aa12.14□□□□□ -0.47
VPS11-207ENST00000620429 RXRBP28702 533 aa12.14□□□□□ -0.47
VPS11-207ENST00000620429 BRINP3Q76B58 766 aa12.14□□□□□ -0.47
VPS11-207ENST00000620429 UPF1Q92900 1129 aaKnown RBP eCLIP12.14□□□□□ -0.47
VPS11-207ENST00000620429 MEIS3Q99687 375 aa12.14□□□□□ -0.47
VPS11-207ENST00000620429 NRBP1Q9UHY1 535 aa12.14□□□□□ -0.47
VPS11-207ENST00000620429 RGPD8O14715 1765 aaPredicted RBP12.14□□□□□ -0.47
VPS11-207ENST00000620429 ZNF75DP51815 510 aa12.14□□□□□ -0.47
VPS11-207ENST00000620429 CCDC93Q567U6 631 aa12.14□□□□□ -0.47
VPS11-207ENST00000620429 GIMAP6Q6P9H5 292 aa12.14□□□□□ -0.47
VPS11-207ENST00000620429 JMYQ8N9B5 988 aa12.14□□□□□ -0.47
VPS11-207ENST00000620429 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.14□□□□□ -0.47
VPS11-207ENST00000620429 MARF1Q9Y4F3 1742 aaKnown RBP12.14□□□□□ -0.47
VPS11-207ENST00000620429 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
VPS11-207ENST00000620429 CDC25BP30305 580 aa12.13□□□□□ -0.47
VPS11-207ENST00000620429 NBPF10Q6P3W6 841 aaKnown RBP12.13□□□□□ -0.47
VPS11-207ENST00000620429 LEKR1Q6ZMV7 388 aa12.13□□□□□ -0.47
VPS11-207ENST00000620429 ADAM21Q9UKJ8 722 aa12.13□□□□□ -0.47
VPS11-207ENST00000620429 USP31Q70CQ4 1352 aa12.13□□□□□ -0.47
VPS11-207ENST00000620429 DLG5Q8TDM6 1919 aa12.13□□□□□ -0.47
VPS11-207ENST00000620429 SMC1AQ14683 1233 aaKnown RBP12.13□□□□□ -0.47
VPS11-207ENST00000620429 NBPF9Q3BBW0 867 aa12.13□□□□□ -0.47
VPS11-207ENST00000620429 DRC7Q8IY82 874 aa12.13□□□□□ -0.47
VPS11-207ENST00000620429 TBC1D22AQ8WUA7 517 aa12.13□□□□□ -0.47
VPS11-207ENST00000620429 PDE1AP54750 535 aa12.12□□□□□ -0.47
VPS11-207ENST00000620429 NLRP6P59044 892 aa12.12□□□□□ -0.47
VPS11-207ENST00000620429 ARHGAP29Q52LW3 1261 aa12.12□□□□□ -0.47
VPS11-207ENST00000620429 EFCAB13Q8IY85 973 aa12.12□□□□□ -0.47
VPS11-207ENST00000620429 FAM212AQ96EL1 285 aa12.12□□□□□ -0.47
VPS11-207ENST00000620429 ZCCHC17Q9NP64 241 aaKnown RBP12.12□□□□□ -0.47
VPS11-207ENST00000620429 MIS18AQ9NYP9 233 aa12.12□□□□□ -0.47
VPS11-207ENST00000620429 FBXO3Q9UK99 471 aa12.12□□□□□ -0.47
VPS11-207ENST00000620429 USP27XA6NNY8 438 aa12.12□□□□□ -0.47
VPS11-207ENST00000620429 HMMRO75330 724 aa12.12□□□□□ -0.47
VPS11-207ENST00000620429 NBPF11Q86T75 865 aa12.12□□□□□ -0.47
VPS11-207ENST00000620429 KLHL33A6NCF5 533 aa12.11□□□□□ -0.47
VPS11-207ENST00000620429 LMAN1P49257 510 aa12.11□□□□□ -0.47
VPS11-207ENST00000620429 MAP9Q49MG5 647 aa12.11□□□□□ -0.47
VPS11-207ENST00000620429 LRRC8AQ8IWT6 810 aa12.11□□□□□ -0.47
VPS11-207ENST00000620429 ORC3Q9UBD5 711 aaPredicted RBP12.11□□□□□ -0.47
VPS11-207ENST00000620429 MKRN1Q9UHC7 482 aaKnown RBP12.11□□□□□ -0.47
VPS11-207ENST00000620429 TBC1D8O95759 1140 aa12.11□□□□□ -0.47
VPS11-207ENST00000620429 CASTP20810 708 aaKnown RBP12.11□□□□□ -0.47
VPS11-207ENST00000620429 TSHZ3Q63HK5 1081 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms