RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, humanhuman

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-223ENST00000619644 ATP5J2-PTCD1G3V325 749 aa17.13■□□□□ 0.33
SMTN-223ENST00000619644 PTCD1O75127 700 aaKnown RBP17.13■□□□□ 0.33
SMTN-223ENST00000619644 COPS6Q7L5N1 327 aa17.13■□□□□ 0.33
SMTN-223ENST00000619644 XAGE3Q8WTP9 111 aa17.12■□□□□ 0.33
SMTN-223ENST00000619644 HIP1O00291 1037 aa17.12■□□□□ 0.33
SMTN-223ENST00000619644 JAK2O60674 1132 aa17.12■□□□□ 0.33
SMTN-223ENST00000619644 MAP4K1Q92918 833 aa17.12■□□□□ 0.33
SMTN-223ENST00000619644 FBXW7Q969H0 707 aa17.12■□□□□ 0.33
SMTN-223ENST00000619644 IL17RAQ96F46 866 aa17.12■□□□□ 0.33
SMTN-223ENST00000619644 FUCA2Q9BTY2 467 aa17.12■□□□□ 0.33
SMTN-223ENST00000619644 NWD1Q149M9 1564 aa17.12■□□□□ 0.33
SMTN-223ENST00000619644 KAZALD1Q96I82 304 aa17.11■□□□□ 0.33
SMTN-223ENST00000619644 CTIFO43310 598 aaKnown RBP17.11■□□□□ 0.33
SMTN-223ENST00000619644 CSB-PGBD3P0DP91 1061 aa17.11■□□□□ 0.33
SMTN-223ENST00000619644 PDCP20941 246 aa17.11■□□□□ 0.33
SMTN-223ENST00000619644 SEC62Q99442 399 aaKnown RBP17.11■□□□□ 0.33
SMTN-223ENST00000619644 MTX1Q13505 466 aa17.11■□□□□ 0.33
SMTN-223ENST00000619644 TM6SF1Q9BZW5 370 aa17.11■□□□□ 0.33
SMTN-223ENST00000619644 EPHA10Q5JZY3 1008 aa17.1■□□□□ 0.33
SMTN-223ENST00000619644 DDX46Q7L014 1031 aaKnown RBP17.1■□□□□ 0.33
SMTN-223ENST00000619644 UBE3BQ7Z3V4 1068 aa17.1■□□□□ 0.33
SMTN-223ENST00000619644 NFATC2IPQ8NCF5 419 aa17.1■□□□□ 0.33
SMTN-223ENST00000619644 NEUROD6Q96NK8 337 aa17.1■□□□□ 0.33
SMTN-223ENST00000619644 AXIN2Q9Y2T1 843 aa17.1■□□□□ 0.33
SMTN-223ENST00000619644 CACNA1FO60840 1977 aa17.1■□□□□ 0.33
SMTN-223ENST00000619644 ANO6Q4KMQ2 910 aa17.1■□□□□ 0.33
SMTN-223ENST00000619644 TRIM5Q9C035 493 aa17.1■□□□□ 0.33
SMTN-223ENST00000619644 GOLGA6L6A8MZA4 724 aa17.09■□□□□ 0.33
SMTN-223ENST00000619644 IGKV5-2P06315 115 aa17.09■□□□□ 0.33
SMTN-223ENST00000619644 TYRO3Q06418 890 aa17.09■□□□□ 0.33
SMTN-223ENST00000619644 RAPGEF4Q8WZA2 1011 aa17.09■□□□□ 0.33
SMTN-223ENST00000619644 DDX21Q9NR30 783 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMTN-223ENST00000619644 USP42Q9H9J4 1324 aaKnown RBP17.09■□□□□ 0.33
SMTN-223ENST00000619644 TPM3P06753 285 aa17.09■□□□□ 0.33
SMTN-223ENST00000619644 PTGS1P23219 599 aa17.09■□□□□ 0.33
SMTN-223ENST00000619644 RPS6KB1P23443 525 aa17.09■□□□□ 0.33
SMTN-223ENST00000619644 TUBGCP6Q96RT7 1819 aa17.08■□□□□ 0.33
SMTN-223ENST00000619644 TFCP2Q12800 502 aa17.08■□□□□ 0.33
SMTN-223ENST00000619644 ANKRD1Q15327 319 aa17.08■□□□□ 0.33
SMTN-223ENST00000619644 SLFNL1Q499Z3 407 aa17.08■□□□□ 0.32
SMTN-223ENST00000619644 NCBP1Q09161 790 aaKnown RBP17.07■□□□□ 0.32
SMTN-223ENST00000619644 Q6ZUG5 572 aa17.07■□□□□ 0.32
SMTN-223ENST00000619644 FEZ1Q99689 392 aa17.07■□□□□ 0.32
SMTN-223ENST00000619644 PXDNQ92626 1479 aa17.07■□□□□ 0.32
SMTN-223ENST00000619644 ANKARQ7Z5J8 1434 aa17.07■□□□□ 0.32
SMTN-223ENST00000619644 TOB2Q14106 344 aaPredicted RBP17.07■□□□□ 0.32
SMTN-223ENST00000619644 TTC5Q8N0Z6 440 aa17.07■□□□□ 0.32
SMTN-223ENST00000619644 FAM200AQ8TCP9 573 aa17.07■□□□□ 0.32
SMTN-223ENST00000619644 BRF1Q92994 677 aa17.07■□□□□ 0.32
SMTN-223ENST00000619644 LRRC37A3O60309 1634 aa17.07■□□□□ 0.32
SMTN-223ENST00000619644 GUCY1B3Q02153 619 aa17.06■□□□□ 0.32
SMTN-223ENST00000619644 ZNF790Q6PG37 636 aa17.06■□□□□ 0.32
SMTN-223ENST00000619644 ANKLE2Q86XL3 938 aa17.06■□□□□ 0.32
SMTN-223ENST00000619644 NEK1Q96PY6 1258 aa17.06■□□□□ 0.32
SMTN-223ENST00000619644 SCAND2PQ9GZW5 306 aaPredicted RBP17.06■□□□□ 0.32
SMTN-223ENST00000619644 DNAJC25Q9H1X3 360 aa17.06■□□□□ 0.32
SMTN-223ENST00000619644 NEURL1BA8MQ27 555 aa17.06■□□□□ 0.32
SMTN-223ENST00000619644 NR1I2O75469 434 aa17.06■□□□□ 0.32
SMTN-223ENST00000619644 CCDC186Q7Z3E2 898 aa17.06■□□□□ 0.32
SMTN-223ENST00000619644 CCT2P78371 535 aaKnown RBP17.06■□□□□ 0.32
SMTN-223ENST00000619644 GCKRQ14397 625 aa17.06■□□□□ 0.32
SMTN-223ENST00000619644 LEO1Q8WVC0 666 aaPredicted RBP17.06■□□□□ 0.32
SMTN-223ENST00000619644 DBNDD2Q9BQY9 259 aa17.06■□□□□ 0.32
SMTN-223ENST00000619644 LRMPQ12912 555 aa17.05■□□□□ 0.32
SMTN-223ENST00000619644 ANKRD13DQ6ZTN6 518 aa17.05■□□□□ 0.32
SMTN-223ENST00000619644 ZNF771Q7L3S4 317 aaPredicted RBP17.05■□□□□ 0.32
SMTN-223ENST00000619644 OGFRQ9NZT2 677 aa17.05■□□□□ 0.32
SMTN-223ENST00000619644 DBNLQ9UJU6 430 aaKnown RBP17.05■□□□□ 0.32
SMTN-223ENST00000619644 ZNF330Q9Y3S2 320 aaPredicted RBP17.05■□□□□ 0.32
SMTN-223ENST00000619644 USP16Q9Y5T5 823 aa17.05■□□□□ 0.32
SMTN-223ENST00000619644 MRVI1Q9Y6F6 885 aa17.05■□□□□ 0.32
SMTN-223ENST00000619644 A0A087WZG4 1122 aa17.05■□□□□ 0.32
SMTN-223ENST00000619644 CHST3Q7LGC8 479 aa17.05■□□□□ 0.32
SMTN-223ENST00000619644 ARHGEF25Q86VW2 580 aa17.05■□□□□ 0.32
SMTN-223ENST00000619644 NRBP1Q9UHY1 535 aa17.05■□□□□ 0.32
SMTN-223ENST00000619644 TAF5LO75529 589 aa17.04■□□□□ 0.32
SMTN-223ENST00000619644 ZNF496Q96IT1 587 aaPredicted RBP17.04■□□□□ 0.32
SMTN-223ENST00000619644 CBX8Q9HC52 389 aa17.04■□□□□ 0.32
SMTN-223ENST00000619644 A0A087WWV3 80 aa17.04■□□□□ 0.32
SMTN-223ENST00000619644 C16orf45Q96MC5 204 aaPredicted RBP17.04■□□□□ 0.32
SMTN-223ENST00000619644 TRHP20396 242 aaPredicted RBP17.03■□□□□ 0.32
SMTN-223ENST00000619644 ZNF165P49910 485 aa17.03■□□□□ 0.32
SMTN-223ENST00000619644 ZNF592Q92610 1267 aa17.03■□□□□ 0.32
SMTN-223ENST00000619644 FTOQ9C0B1 505 aaKnown RBP eCLIP17.03■□□□□ 0.32
SMTN-223ENST00000619644 PDIA6Q15084 440 aa17.03■□□□□ 0.32
SMTN-223ENST00000619644 TNNI3KQ59H18 835 aa17.03■□□□□ 0.32
SMTN-223ENST00000619644 FPGT-TNNI3KV9GXZ4 949 aa17.03■□□□□ 0.32
SMTN-223ENST00000619644 GOLIM4O00461 696 aa17.02■□□□□ 0.32
SMTN-223ENST00000619644 DDX17Q92841 729 aaKnown RBP17.02■□□□□ 0.32
SMTN-223ENST00000619644 LTN1O94822 1766 aa17.02■□□□□ 0.32
SMTN-223ENST00000619644 ERCC4Q92889 916 aaPredicted RBP17.02■□□□□ 0.32
SMTN-223ENST00000619644 CTNNA3Q9UI47 895 aa17.02■□□□□ 0.32
SMTN-223ENST00000619644 NPHP3Q7Z494 1330 aa17.02■□□□□ 0.31
SMTN-223ENST00000619644 GOLGA6L19H0YKK7 550 aa17.02■□□□□ 0.31
SMTN-223ENST00000619644 KRT28Q7Z3Y7 464 aa17.02■□□□□ 0.31
SMTN-223ENST00000619644 CABLES1Q8TDN4 633 aa17.01■□□□□ 0.31
SMTN-223ENST00000619644 BBXQ8WY36 941 aaPredicted RBP17.01■□□□□ 0.31
SMTN-223ENST00000619644 CGNQ9P2M7 1197 aaKnown RBP17.01■□□□□ 0.31
SMTN-223ENST00000619644 CYP21A2P08686 494 aa17.01■□□□□ 0.31
SMTN-223ENST00000619644 APOBRQ0VD83 1088 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms