RNA–Protein interactions for RNA: ENST00000618411.4

SRRT-217, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,893 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-217ENST00000618411 UBXN6Q9BZV1 441 aa17.68■□□□□ 0.42
SRRT-217ENST00000618411 NAT10Q9H0A0 1025 aaKnown RBP17.68■□□□□ 0.42
SRRT-217ENST00000618411 ORC3Q9UBD5 711 aaPredicted RBP17.68■□□□□ 0.42
SRRT-217ENST00000618411 SPATA31D1Q6ZQQ2 1576 aa17.67■□□□□ 0.42
SRRT-217ENST00000618411 HIP1O00291 1037 aa17.67■□□□□ 0.42
SRRT-217ENST00000618411 GPS2Q13227 327 aa17.67■□□□□ 0.42
SRRT-217ENST00000618411 NBPF11Q86T75 865 aa17.67■□□□□ 0.42
SRRT-217ENST00000618411 LRRN4CLQ8ND94 238 aa17.67■□□□□ 0.42
SRRT-217ENST00000618411 NRDCO43847 1150 aa17.67■□□□□ 0.42
SRRT-217ENST00000618411 TPM1P09493 284 aa17.67■□□□□ 0.42
SRRT-217ENST00000618411 TOB2Q14106 344 aaPredicted RBP17.67■□□□□ 0.42
SRRT-217ENST00000618411 CLASRPQ8N2M8 674 aaKnown RBP17.67■□□□□ 0.42
SRRT-217ENST00000618411 GPATCH3Q96I76 525 aa17.67■□□□□ 0.42
SRRT-217ENST00000618411 SRRTQ9BXP5 876 aaKnown RBP17.67■□□□□ 0.42
SRRT-217ENST00000618411 SNRKQ9NRH2 765 aa17.67■□□□□ 0.42
SRRT-217ENST00000618411 AKAP12Q02952 1782 aa17.67■□□□□ 0.42
SRRT-217ENST00000618411 EFCC1Q9HA90 598 aa17.66■□□□□ 0.42
SRRT-217ENST00000618411 MAPK8IP2Q13387 824 aaPredicted RBP17.66■□□□□ 0.42
SRRT-217ENST00000618411 CCAR1Q8IX12 1150 aaKnown RBP17.66■□□□□ 0.42
SRRT-217ENST00000618411 NECTIN2Q92692 538 aa17.66■□□□□ 0.42
SRRT-217ENST00000618411 RCOR1Q9UKL0 485 aa17.66■□□□□ 0.42
SRRT-217ENST00000618411 ETF1P62495 437 aaKnown RBP17.65■□□□□ 0.42
SRRT-217ENST00000618411 MAP3K19Q56UN5 1328 aa17.65■□□□□ 0.42
SRRT-217ENST00000618411 CCP110O43303 1012 aa17.65■□□□□ 0.42
SRRT-217ENST00000618411 CCDC73Q6ZRK6 1079 aa17.65■□□□□ 0.42
SRRT-217ENST00000618411 NEK11Q8NG66 645 aa17.65■□□□□ 0.42
SRRT-217ENST00000618411 PHLPP2Q6ZVD8 1323 aa17.65■□□□□ 0.42
SRRT-217ENST00000618411 RIMBP3CA6NJZ7 1639 aa17.65■□□□□ 0.42
SRRT-217ENST00000618411 RIMBP3BA6NNM3 1639 aa17.65■□□□□ 0.42
SRRT-217ENST00000618411 RIMBP3Q9UFD9 1639 aa17.65■□□□□ 0.42
SRRT-217ENST00000618411 POLR3GO15318 223 aaPredicted RBP17.65■□□□□ 0.42
SRRT-217ENST00000618411 KINO60870 393 aaKnown RBP17.65■□□□□ 0.42
SRRT-217ENST00000618411 AOPEPQ8N6M6 819 aa17.65■□□□□ 0.42
SRRT-217ENST00000618411 BRF1Q92994 677 aa17.65■□□□□ 0.42
SRRT-217ENST00000618411 SFPQP23246 707 aaKnown RBP eCLIP17.64■□□□□ 0.41
SRRT-217ENST00000618411 RASSF4Q9H2L5 321 aa17.64■□□□□ 0.41
SRRT-217ENST00000618411 H3BQV1 296 aa17.64■□□□□ 0.41
SRRT-217ENST00000618411 OS9Q13438 667 aaPredicted RBP17.64■□□□□ 0.41
SRRT-217ENST00000618411 COL9A3Q14050 684 aaPredicted RBP17.64■□□□□ 0.41
SRRT-217ENST00000618411 TSGA10IPQ3SY00 556 aa17.64■□□□□ 0.41
SRRT-217ENST00000618411 IFFO2Q5TF58 517 aa17.64■□□□□ 0.41
SRRT-217ENST00000618411 NCKAP5LQ9HCH0 1330 aa17.63■□□□□ 0.41
SRRT-217ENST00000618411 ARMCX5Q6P1M9 558 aa17.63■□□□□ 0.41
SRRT-217ENST00000618411 TCEANC2Q96MN5 208 aa17.63■□□□□ 0.41
SRRT-217ENST00000618411 EFCAB8A8MWE9 144 aa17.63■□□□□ 0.41
SRRT-217ENST00000618411 FAM160A1Q05DH4 1040 aa17.63■□□□□ 0.41
SRRT-217ENST00000618411 KRBA2Q6ZNG9 492 aa17.63■□□□□ 0.41
SRRT-217ENST00000618411 MNS1Q8NEH6 495 aa17.63■□□□□ 0.41
SRRT-217ENST00000618411 ENGASEQ8NFI3 743 aa17.63■□□□□ 0.41
SRRT-217ENST00000618411 HMG20BQ9P0W2 317 aa17.63■□□□□ 0.41
SRRT-217ENST00000618411 KDRP35968 1356 aa17.63■□□□□ 0.41
SRRT-217ENST00000618411 NBPF7P0C2Y1 421 aaPredicted RBP17.62■□□□□ 0.41
SRRT-217ENST00000618411 ADD1P35611 737 aaKnown RBP17.62■□□□□ 0.41
SRRT-217ENST00000618411 STK3Q13188 491 aa17.62■□□□□ 0.41
SRRT-217ENST00000618411 CCDC158Q5M9N0 1113 aa17.62■□□□□ 0.41
SRRT-217ENST00000618411 HOMER1Q86YM7 354 aa17.62■□□□□ 0.41
SRRT-217ENST00000618411 BABAM1Q9NWV8 329 aa17.62■□□□□ 0.41
SRRT-217ENST00000618411 NPHP4O75161 1426 aaPredicted RBP17.62■□□□□ 0.41
SRRT-217ENST00000618411 TADA3O75528 432 aa17.62■□□□□ 0.41
SRRT-217ENST00000618411 TNNT3P45378 269 aaPredicted RBP17.62■□□□□ 0.41
SRRT-217ENST00000618411 NMIQ13287 307 aaPredicted RBP17.62■□□□□ 0.41
SRRT-217ENST00000618411 FAM227BQ96M60 508 aa17.62■□□□□ 0.41
SRRT-217ENST00000618411 GOLPH3LQ9H4A5 285 aa17.62■□□□□ 0.41
SRRT-217ENST00000618411 PEAK1Q9H792 1746 aa17.62■□□□□ 0.41
SRRT-217ENST00000618411 JAK2O60674 1132 aa17.62■□□□□ 0.41
SRRT-217ENST00000618411 IFIT2P09913 472 aaKnown RBP17.62■□□□□ 0.41
SRRT-217ENST00000618411 TAF7LQ5H9L4 462 aa17.62■□□□□ 0.41
SRRT-217ENST00000618411 ATL3Q6DD88 541 aa17.62■□□□□ 0.41
SRRT-217ENST00000618411 SMARCE1Q969G3 411 aa17.62■□□□□ 0.41
SRRT-217ENST00000618411 CWC15Q9P013 229 aaKnown RBP17.62■□□□□ 0.41
SRRT-217ENST00000618411 OVOS2A0A0J9YW53 1432 aa17.61■□□□□ 0.41
SRRT-217ENST00000618411 OVOS2Q6IE36 1432 aa17.61■□□□□ 0.41
SRRT-217ENST00000618411 ZSCAN26Q16670 478 aa17.61■□□□□ 0.41
SRRT-217ENST00000618411 DIP2CQ9Y2E4 1556 aa17.61■□□□□ 0.41
SRRT-217ENST00000618411 ST5P78524 1137 aa17.61■□□□□ 0.41
SRRT-217ENST00000618411 MTX1Q13505 466 aa17.61■□□□□ 0.41
SRRT-217ENST00000618411 ERC1Q8IUD2 1116 aa17.61■□□□□ 0.41
SRRT-217ENST00000618411 NFATC2IPQ8NCF5 419 aa17.61■□□□□ 0.41
SRRT-217ENST00000618411 BPIFA3Q9BQP9 254 aa17.61■□□□□ 0.41
SRRT-217ENST00000618411 DNAI1Q9UI46 699 aa17.61■□□□□ 0.41
SRRT-217ENST00000618411 LRRFIP1Q32MZ4 808 aaKnown RBP17.6■□□□□ 0.41
SRRT-217ENST00000618411 TMC6Q7Z403 805 aa17.6■□□□□ 0.41
SRRT-217ENST00000618411 SYTL4Q96C24 671 aaPredicted RBP17.6■□□□□ 0.41
SRRT-217ENST00000618411 DDX11Q96FC9 970 aa17.6■□□□□ 0.41
SRRT-217ENST00000618411 XPO4Q9C0E2 1151 aaKnown RBP17.6■□□□□ 0.41
SRRT-217ENST00000618411 LRRC37A3O60309 1634 aa17.6■□□□□ 0.41
SRRT-217ENST00000618411 PHAXQ9H814 394 aaKnown RBP17.6■□□□□ 0.41
SRRT-217ENST00000618411 TBC1D8O95759 1140 aa17.59■□□□□ 0.41
SRRT-217ENST00000618411 OAS2P29728 719 aaKnown RBP17.59■□□□□ 0.41
SRRT-217ENST00000618411 IRX3P78415 501 aaPredicted RBP17.59■□□□□ 0.41
SRRT-217ENST00000618411 CEBPZQ03701 1054 aaKnown RBP17.59■□□□□ 0.41
SRRT-217ENST00000618411 KRT32Q14532 448 aa17.59■□□□□ 0.41
SRRT-217ENST00000618411 HDGFL1Q5TGJ6 251 aa17.59■□□□□ 0.41
SRRT-217ENST00000618411 NAA16Q6N069 864 aaPredicted RBP17.59■□□□□ 0.41
SRRT-217ENST00000618411 PSD3Q9NYI0 1048 aa17.59■□□□□ 0.41
SRRT-217ENST00000618411 RSPH14Q9UHP6 348 aa17.59■□□□□ 0.41
SRRT-217ENST00000618411 SMC1AQ14683 1233 aaKnown RBP17.59■□□□□ 0.41
SRRT-217ENST00000618411 GORABQ5T7V8 394 aa17.59■□□□□ 0.41
SRRT-217ENST00000618411 IFNKQ9P0W0 207 aa17.59■□□□□ 0.41
SRRT-217ENST00000618411 USP31Q70CQ4 1352 aa17.58■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms