RNA–Protein interactions for RNA: ENST00000615513.4

CDKN1A-208, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKN1A, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-208ENST00000615513 ZSCAN22P10073 491 aaPredicted RBP17.66■□□□□ 0.42
CDKN1A-208ENST00000615513 PDIA4P13667 645 aaKnown RBP17.66■□□□□ 0.42
CDKN1A-208ENST00000615513 USPL1Q5W0Q7 1092 aa17.66■□□□□ 0.42
CDKN1A-208ENST00000615513 ATG9AQ7Z3C6 839 aa17.66■□□□□ 0.42
CDKN1A-208ENST00000615513 TJP1Q07157 1748 aa17.66■□□□□ 0.42
CDKN1A-208ENST00000615513 STX6O43752 255 aa17.66■□□□□ 0.42
CDKN1A-208ENST00000615513 NASPP49321 788 aaPredicted RBP17.66■□□□□ 0.42
CDKN1A-208ENST00000615513 ANKRD1Q15327 319 aa17.66■□□□□ 0.42
CDKN1A-208ENST00000615513 TMEM87AQ8NBN3 555 aa17.66■□□□□ 0.42
CDKN1A-208ENST00000615513 CHAMP1Q96JM3 812 aa17.66■□□□□ 0.42
CDKN1A-208ENST00000615513 ISCA1Q9BUE6 129 aa17.66■□□□□ 0.42
CDKN1A-208ENST00000615513 ZBTB3Q9H5J0 574 aa17.66■□□□□ 0.42
CDKN1A-208ENST00000615513 KDM4FA0A1W2PPD8 638 aa17.65■□□□□ 0.42
CDKN1A-208ENST00000615513 CIAO1O76071 339 aa17.65■□□□□ 0.42
CDKN1A-208ENST00000615513 TRIM28Q13263 835 aaKnown RBP17.65■□□□□ 0.42
CDKN1A-208ENST00000615513 ZNF589Q86UQ0 364 aaPredicted RBP17.65■□□□□ 0.42
CDKN1A-208ENST00000615513 CHMP3Q9Y3E7 222 aa17.65■□□□□ 0.42
CDKN1A-208ENST00000615513 SYT1P21579 422 aa17.65■□□□□ 0.42
CDKN1A-208ENST00000615513 TMEM63CQ9P1W3 806 aa17.65■□□□□ 0.42
CDKN1A-208ENST00000615513 ATP6V1DQ9Y5K8 247 aa17.65■□□□□ 0.42
CDKN1A-208ENST00000615513 TOGARAM1Q9Y4F4 1720 aa17.64■□□□□ 0.41
CDKN1A-208ENST00000615513 LARGE1O95461 756 aa17.64■□□□□ 0.41
CDKN1A-208ENST00000615513 KRT32Q14532 448 aa17.64■□□□□ 0.41
CDKN1A-208ENST00000615513 BLOC1S2Q6QNY1 142 aa17.64■□□□□ 0.41
CDKN1A-208ENST00000615513 EDC3Q96F86 508 aaKnown RBP17.64■□□□□ 0.41
CDKN1A-208ENST00000615513 EYA2O00167 538 aa17.63■□□□□ 0.41
CDKN1A-208ENST00000615513 CCDC173Q0VFZ6 552 aa17.63■□□□□ 0.41
CDKN1A-208ENST00000615513 TCIRG1Q13488 830 aa17.63■□□□□ 0.41
CDKN1A-208ENST00000615513 CCDC83Q8IWF9 413 aa17.63■□□□□ 0.41
CDKN1A-208ENST00000615513 KBTBD3Q8NAB2 608 aa17.63■□□□□ 0.41
CDKN1A-208ENST00000615513 ANP32BQ92688 251 aaKnown RBP17.63■□□□□ 0.41
CDKN1A-208ENST00000615513 SYAP1Q96A49 352 aaPredicted RBP17.63■□□□□ 0.41
CDKN1A-208ENST00000615513 FBXO3Q9UK99 471 aa17.63■□□□□ 0.41
CDKN1A-208ENST00000615513 PALLDQ8WX93 1383 aa17.63■□□□□ 0.41
CDKN1A-208ENST00000615513 RPS6KB1P23443 525 aa17.63■□□□□ 0.41
CDKN1A-208ENST00000615513 ME3Q16798 604 aa17.63■□□□□ 0.41
CDKN1A-208ENST00000615513 LRSAM1Q6UWE0 723 aa17.63■□□□□ 0.41
CDKN1A-208ENST00000615513 LARP6Q9BRS8 491 aaKnown RBP17.63■□□□□ 0.41
CDKN1A-208ENST00000615513 RBM27Q9P2N5 1060 aaKnown RBP17.63■□□□□ 0.41
CDKN1A-208ENST00000615513 GJB2P29033 226 aa17.62■□□□□ 0.41
CDKN1A-208ENST00000615513 MCMDC2Q4G0Z9 681 aa17.62■□□□□ 0.41
CDKN1A-208ENST00000615513 PPP1R9BQ96SB3 815 aa17.62■□□□□ 0.41
CDKN1A-208ENST00000615513 DNAJC2Q99543 621 aaKnown RBP17.62■□□□□ 0.41
CDKN1A-208ENST00000615513 NSFL1CQ9UNZ2 370 aaKnown RBP17.62■□□□□ 0.41
CDKN1A-208ENST00000615513 U3KPZ7 1027 aaPredicted RBP17.62■□□□□ 0.41
CDKN1A-208ENST00000615513 F13A1P00488 732 aa17.62■□□□□ 0.41
CDKN1A-208ENST00000615513 SH3TC1Q8TE82 1336 aa17.62■□□□□ 0.41
CDKN1A-208ENST00000615513 ZNF609O15014 1411 aa17.61■□□□□ 0.41
CDKN1A-208ENST00000615513 PIGBQ92521 554 aa17.61■□□□□ 0.41
CDKN1A-208ENST00000615513 TPCN1Q9ULQ1 816 aa17.61■□□□□ 0.41
CDKN1A-208ENST00000615513 STARD3NLO95772 234 aa17.6■□□□□ 0.41
CDKN1A-208ENST00000615513 PRIM1P49642 420 aaKnown RBP17.6■□□□□ 0.41
CDKN1A-208ENST00000615513 ST3GAL1Q11201 340 aa17.6■□□□□ 0.41
CDKN1A-208ENST00000615513 KIF6Q6ZMV9 814 aa17.6■□□□□ 0.41
CDKN1A-208ENST00000615513 USP48Q86UV5 1035 aa17.6■□□□□ 0.41
CDKN1A-208ENST00000615513 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.6■□□□□ 0.41
CDKN1A-208ENST00000615513 PLA2G12BQ9BX93 195 aa17.6■□□□□ 0.41
CDKN1A-208ENST00000615513 PCCAP05165 728 aaPredicted RBP17.6■□□□□ 0.41
CDKN1A-208ENST00000615513 TRIM44Q96DX7 344 aaPredicted RBP17.6■□□□□ 0.41
CDKN1A-208ENST00000615513 NEUROD6Q96NK8 337 aa17.6■□□□□ 0.41
CDKN1A-208ENST00000615513 BTG4Q9NY30 223 aa17.6■□□□□ 0.41
CDKN1A-208ENST00000615513 DISP2A7MBM2 1401 aa17.6■□□□□ 0.41
CDKN1A-208ENST00000615513 HELLSQ9NRZ9 838 aa17.59■□□□□ 0.41
CDKN1A-208ENST00000615513 PAG1Q9NWQ8 432 aa17.59■□□□□ 0.41
CDKN1A-208ENST00000615513 ASAP1Q9ULH1 1129 aa17.59■□□□□ 0.41
CDKN1A-208ENST00000615513 MTMR6Q9Y217 621 aa17.59■□□□□ 0.41
CDKN1A-208ENST00000615513 PHF14O94880 888 aa17.59■□□□□ 0.41
CDKN1A-208ENST00000615513 CSPP1Q1MSJ5 1256 aa17.59■□□□□ 0.41
CDKN1A-208ENST00000615513 LRRC24Q50LG9 513 aa17.59■□□□□ 0.41
CDKN1A-208ENST00000615513 DDX46Q7L014 1031 aaKnown RBP17.59■□□□□ 0.41
CDKN1A-208ENST00000615513 DNAJC10Q8IXB1 793 aa17.59■□□□□ 0.41
CDKN1A-208ENST00000615513 SYCE3A1L190 88 aa17.58■□□□□ 0.4
CDKN1A-208ENST00000615513 PDCP20941 246 aa17.58■□□□□ 0.4
CDKN1A-208ENST00000615513 TIMM10P62072 90 aa17.58■□□□□ 0.4
CDKN1A-208ENST00000615513 CCDC57Q2TAC2 916 aa17.58■□□□□ 0.4
CDKN1A-208ENST00000615513 RBSNQ9H1K0 784 aa17.58■□□□□ 0.4
CDKN1A-208ENST00000615513 NDUFB9Q9Y6M9 179 aa17.58■□□□□ 0.4
CDKN1A-208ENST00000615513 TOB2Q14106 344 aaPredicted RBP17.57■□□□□ 0.4
CDKN1A-208ENST00000615513 CEP126Q9P2H0 1117 aa17.57■□□□□ 0.4
CDKN1A-208ENST00000615513 COL14A1Q05707 1796 aaKnown RBP17.57■□□□□ 0.4
CDKN1A-208ENST00000615513 LRP6O75581 1613 aa17.57■□□□□ 0.4
CDKN1A-208ENST00000615513 A0A1B0GUL7 405 aa17.57■□□□□ 0.4
CDKN1A-208ENST00000615513 KLHL34Q8N239 644 aa17.57■□□□□ 0.4
CDKN1A-208ENST00000615513 ZBTB38Q8NAP3 1195 aaPredicted RBP17.57■□□□□ 0.4
CDKN1A-208ENST00000615513 ZNF594Q96JF6 807 aaPredicted RBP17.57■□□□□ 0.4
CDKN1A-208ENST00000615513 NEK1Q96PY6 1258 aa17.57■□□□□ 0.4
CDKN1A-208ENST00000615513 GDPD2Q9HCC8 539 aa17.57■□□□□ 0.4
CDKN1A-208ENST00000615513 AKAP2Q9Y2D5 859 aa17.57■□□□□ 0.4
CDKN1A-208ENST00000615513 TAF6LQ9Y6J9 622 aa17.57■□□□□ 0.4
CDKN1A-208ENST00000615513 SPEF2Q9C093 1822 aa17.57■□□□□ 0.4
CDKN1A-208ENST00000615513 MAP3K15Q6ZN16 1313 aa17.56■□□□□ 0.4
CDKN1A-208ENST00000615513 GOLIM4O00461 696 aa17.56■□□□□ 0.4
CDKN1A-208ENST00000615513 GADD45BO75293 160 aaPredicted RBP17.56■□□□□ 0.4
CDKN1A-208ENST00000615513 CSF1RP07333 972 aa17.56■□□□□ 0.4
CDKN1A-208ENST00000615513 UBE2HP62256 183 aa17.56■□□□□ 0.4
CDKN1A-208ENST00000615513 FOXD4L6Q3SYB3 417 aaPredicted RBP17.56■□□□□ 0.4
CDKN1A-208ENST00000615513 FOXD4L3Q6VB84 417 aaPredicted RBP17.56■□□□□ 0.4
CDKN1A-208ENST00000615513 GIGYF2Q6Y7W6 1299 aaKnown RBP17.56■□□□□ 0.4
CDKN1A-208ENST00000615513 NECAB1Q8N987 351 aa17.56■□□□□ 0.4
CDKN1A-208ENST00000615513 DSCC1Q9BVC3 393 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms