RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 PTPN12Q05209 780 aaKnown RBP12.07□□□□□ -0.48
GGA3-221ENST00000614198 GIGYF2Q6Y7W6 1299 aaKnown RBP12.07□□□□□ -0.48
GGA3-221ENST00000614198 PAXIP1Q6ZW49 1069 aaPredicted RBP12.07□□□□□ -0.48
GGA3-221ENST00000614198 RILPL2Q969X0 211 aa12.07□□□□□ -0.48
GGA3-221ENST00000614198 RGS17Q9UGC6 210 aaPredicted RBP12.07□□□□□ -0.48
GGA3-221ENST00000614198 CCNL1Q9UK58 526 aaPredicted RBP12.07□□□□□ -0.48
GGA3-221ENST00000614198 THSD7AQ9UPZ6 1657 aa12.06□□□□□ -0.48
GGA3-221ENST00000614198 MSNP26038 577 aaKnown RBP12.06□□□□□ -0.48
GGA3-221ENST00000614198 RFX5P48382 616 aaPredicted RBP12.06□□□□□ -0.48
GGA3-221ENST00000614198 NLRP10Q86W26 655 aa12.06□□□□□ -0.48
GGA3-221ENST00000614198 EAF2Q96CJ1 260 aaPredicted RBP12.06□□□□□ -0.48
GGA3-221ENST00000614198 ISCA1Q9BUE6 129 aa12.06□□□□□ -0.48
GGA3-221ENST00000614198 TEX13AQ9BXU3 409 aaPredicted RBP12.06□□□□□ -0.48
GGA3-221ENST00000614198 IL25Q9H293 177 aa12.06□□□□□ -0.48
GGA3-221ENST00000614198 MX1P20591 662 aa12.06□□□□□ -0.48
GGA3-221ENST00000614198 SUSD4Q5VX71 490 aa12.06□□□□□ -0.48
GGA3-221ENST00000614198 EDC3Q96F86 508 aaKnown RBP12.06□□□□□ -0.48
GGA3-221ENST00000614198 SNAP23O00161 211 aa12.05□□□□□ -0.48
GGA3-221ENST00000614198 GNPATO15228 680 aa12.05□□□□□ -0.48
GGA3-221ENST00000614198 TRMT112Q9UI30 125 aaKnown RBP12.05□□□□□ -0.48
GGA3-221ENST00000614198 TRIM6-TRIM34B2RNG4 842 aa12.05□□□□□ -0.48
GGA3-221ENST00000614198 TFCP2Q12800 502 aa12.05□□□□□ -0.48
GGA3-221ENST00000614198 GBP4Q96PP9 640 aa12.05□□□□□ -0.48
GGA3-221ENST00000614198 NUP98P52948 1817 aa12.05□□□□□ -0.48
GGA3-221ENST00000614198 SALL3Q9BXA9 1300 aa12.05□□□□□ -0.48
GGA3-221ENST00000614198 ONECUT3O60422 494 aaPredicted RBP12.05□□□□□ -0.48
GGA3-221ENST00000614198 HS1BP3Q53T59 392 aa12.05□□□□□ -0.48
GGA3-221ENST00000614198 CIZ1Q9ULV3 898 aaPredicted RBP12.05□□□□□ -0.48
GGA3-221ENST00000614198 IL6STP40189 918 aaPredicted RBP12.04□□□□□ -0.48
GGA3-221ENST00000614198 NASPP49321 788 aaPredicted RBP12.04□□□□□ -0.48
GGA3-221ENST00000614198 BMP2KLQ5H9B9 411 aa12.04□□□□□ -0.48
GGA3-221ENST00000614198 KRT27Q7Z3Y8 459 aa12.04□□□□□ -0.48
GGA3-221ENST00000614198 AACSQ86V21 672 aa12.04□□□□□ -0.48
GGA3-221ENST00000614198 TNPO1Q92973 898 aaKnown RBP12.04□□□□□ -0.48
GGA3-221ENST00000614198 WTIPA6NIX2 430 aaPredicted RBP12.04□□□□□ -0.48
GGA3-221ENST00000614198 CAMTA2O94983 1202 aa12.04□□□□□ -0.48
GGA3-221ENST00000614198 MTX1Q13505 466 aa12.04□□□□□ -0.48
GGA3-221ENST00000614198 CCDC191Q8NCU4 936 aa12.04□□□□□ -0.48
GGA3-221ENST00000614198 NAP1L2Q9ULW6 460 aaPredicted RBP12.04□□□□□ -0.48
GGA3-221ENST00000614198 TIMM10P62072 90 aa12.04□□□□□ -0.48
GGA3-221ENST00000614198 UTP14CQ5TAP6 766 aaKnown RBP12.04□□□□□ -0.48
GGA3-221ENST00000614198 POTEAQ6S8J7 498 aa12.04□□□□□ -0.48
GGA3-221ENST00000614198 GREM2Q9H772 168 aa12.04□□□□□ -0.48
GGA3-221ENST00000614198 R3HCC1Q9Y3T6 440 aaKnown RBP12.04□□□□□ -0.48
GGA3-221ENST00000614198 USPL1Q5W0Q7 1092 aa12.03□□□□□ -0.48
GGA3-221ENST00000614198 C3orf67Q6ZVT6 689 aa12.03□□□□□ -0.48
GGA3-221ENST00000614198 PLCD3Q8N3E9 789 aa12.03□□□□□ -0.48
GGA3-221ENST00000614198 NIP7Q9Y221 180 aaKnown RBP eCLIP12.03□□□□□ -0.48
GGA3-221ENST00000614198 G3BP1Q13283 466 aaKnown RBP eCLIP12.03□□□□□ -0.48
GGA3-221ENST00000614198 SLFNL1Q499Z3 407 aa12.03□□□□□ -0.48
GGA3-221ENST00000614198 SBF2Q86WG5 1849 aa12.03□□□□□ -0.48
GGA3-221ENST00000614198 ZNF500O60304 480 aaPredicted RBP12.02□□□□□ -0.48
GGA3-221ENST00000614198 PROM2Q8N271 834 aa12.02□□□□□ -0.48
GGA3-221ENST00000614198 KIF1BPQ96EK5 621 aa12.02□□□□□ -0.48
GGA3-221ENST00000614198 COL15A1P39059 1388 aa12.02□□□□□ -0.48
GGA3-221ENST00000614198 TAF1P21675 1872 aa12.02□□□□□ -0.48
GGA3-221ENST00000614198 DYNC1I1O14576 645 aa12.02□□□□□ -0.49
GGA3-221ENST00000614198 HELBQ8NG08 1087 aaPredicted RBP12.02□□□□□ -0.49
GGA3-221ENST00000614198 PI4K2BQ8TCG2 481 aa12.02□□□□□ -0.49
GGA3-221ENST00000614198 SEC31BQ9NQW1 1179 aa12.02□□□□□ -0.49
GGA3-221ENST00000614198 COL4A1P02462 1669 aa12.02□□□□□ -0.49
GGA3-221ENST00000614198 RABL6Q3YEC7 729 aaPredicted RBP12.02□□□□□ -0.49
GGA3-221ENST00000614198 TBC1D9BQ66K14 1250 aa12.02□□□□□ -0.49
GGA3-221ENST00000614198 FAM196AQ6ZSG2 479 aa12.02□□□□□ -0.49
GGA3-221ENST00000614198 BCL2L12Q9HB09 334 aa12.02□□□□□ -0.49
GGA3-221ENST00000614198 IRS4O14654 1257 aaPredicted RBP12.01□□□□□ -0.49
GGA3-221ENST00000614198 MAPK8IP2Q13387 824 aaPredicted RBP12.01□□□□□ -0.49
GGA3-221ENST00000614198 RAB3GAP1Q15042 981 aa12.01□□□□□ -0.49
GGA3-221ENST00000614198 ATG9AQ7Z3C6 839 aa12.01□□□□□ -0.49
GGA3-221ENST00000614198 SNX21Q969T3 373 aa12.01□□□□□ -0.49
GGA3-221ENST00000614198 UQCRHLA0A096LP55 91 aa12.01□□□□□ -0.49
GGA3-221ENST00000614198 UQCRHP07919 91 aa12.01□□□□□ -0.49
GGA3-221ENST00000614198 ZBTB38Q8NAP3 1195 aaPredicted RBP12.01□□□□□ -0.49
GGA3-221ENST00000614198 BOLA2Q9H3K6 86 aa12.01□□□□□ -0.49
GGA3-221ENST00000614198 GOLGA6L22H0YM25 854 aa12.01□□□□□ -0.49
GGA3-221ENST00000614198 ZNF34Q8IZ26 560 aa12.01□□□□□ -0.49
GGA3-221ENST00000614198 ARHGEF1Q92888 912 aaKnown RBP12.01□□□□□ -0.49
GGA3-221ENST00000614198 SMARCC1Q92922 1105 aaPredicted RBP12.01□□□□□ -0.49
GGA3-221ENST00000614198 NOL7Q9UMY1 257 aaKnown RBP12.01□□□□□ -0.49
GGA3-221ENST00000614198 DMTNQ08495 405 aa12□□□□□ -0.49
GGA3-221ENST00000614198 NEUROD6Q96NK8 337 aa12□□□□□ -0.49
GGA3-221ENST00000614198 DBNDD2Q9BQY9 259 aa12□□□□□ -0.49
GGA3-221ENST00000614198 VGLL3A8MV65 326 aa11.99□□□□□ -0.49
GGA3-221ENST00000614198 IFIT2P09913 472 aaKnown RBP11.99□□□□□ -0.49
GGA3-221ENST00000614198 CLASRPQ8N2M8 674 aaKnown RBP11.99□□□□□ -0.49
GGA3-221ENST00000614198 TTLL11Q8NHH1 800 aa11.99□□□□□ -0.49
GGA3-221ENST00000614198 DBNLQ9UJU6 430 aaKnown RBP11.99□□□□□ -0.49
GGA3-221ENST00000614198 ITGA6P23229 1130 aa11.99□□□□□ -0.49
GGA3-221ENST00000614198 DDX49Q9Y6V7 483 aaKnown RBP11.99□□□□□ -0.49
GGA3-221ENST00000614198 COL5A3P25940 1745 aaPredicted RBP11.99□□□□□ -0.49
GGA3-221ENST00000614198 PCCAP05165 728 aaPredicted RBP11.99□□□□□ -0.49
GGA3-221ENST00000614198 ERFEQ4G0M1 354 aa11.99□□□□□ -0.49
GGA3-221ENST00000614198 RAB11FIP3O75154 756 aa11.98□□□□□ -0.49
GGA3-221ENST00000614198 CSPP1Q1MSJ5 1256 aa11.98□□□□□ -0.49
GGA3-221ENST00000614198 ADORA1P30542 326 aa11.98□□□□□ -0.49
GGA3-221ENST00000614198 COPRSQ9NQ92 184 aa11.98□□□□□ -0.49
GGA3-221ENST00000614198 TAF5LO75529 589 aa11.98□□□□□ -0.49
GGA3-221ENST00000614198 CCDC57Q2TAC2 916 aa11.98□□□□□ -0.49
GGA3-221ENST00000614198 NHSQ6T4R5 1651 aa11.98□□□□□ -0.49
GGA3-221ENST00000614198 CDC45O75419 566 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms