RNA–Protein interactions for RNA: ENST00000612497.1

SSX3-204, Transcript of SSX family member 3, humanhuman

TSL 5 BASIC

Gene SSX3, Length 1,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-204ENST00000612497 ADM5C9JUS6 153 aa13.79□□□□□ -0.2
SSX3-204ENST00000612497 KIAA2012Q0VF49 1180 aa13.79□□□□□ -0.2
SSX3-204ENST00000612497 TBC1D10BQ4KMP7 808 aaPredicted RBP13.79□□□□□ -0.2
SSX3-204ENST00000612497 REM2Q8IYK8 340 aaPredicted RBP13.79□□□□□ -0.2
SSX3-204ENST00000612497 MPNDQ8N594 471 aa13.79□□□□□ -0.2
SSX3-204ENST00000612497 NLRP3Q96P20 1036 aa13.79□□□□□ -0.2
SSX3-204ENST00000612497 ZBTB12Q9Y330 459 aaPredicted RBP13.79□□□□□ -0.2
SSX3-204ENST00000612497 RBM26Q5T8P6 1007 aaKnown RBP13.78□□□□□ -0.2
SSX3-204ENST00000612497 KIF6Q6ZMV9 814 aa13.78□□□□□ -0.2
SSX3-204ENST00000612497 MAP3K15Q6ZN16 1313 aa13.78□□□□□ -0.2
SSX3-204ENST00000612497 UBN2Q6ZU65 1347 aa13.78□□□□□ -0.2
SSX3-204ENST00000612497 IBTKQ9P2D0 1353 aaPredicted RBP13.78□□□□□ -0.2
SSX3-204ENST00000612497 MKI67P46013 3256 aaKnown RBP13.78□□□□□ -0.2
SSX3-204ENST00000612497 YDJCA8MPS7 323 aa13.77□□□□□ -0.21
SSX3-204ENST00000612497 HSPA5P11021 654 aaKnown RBP13.77□□□□□ -0.21
SSX3-204ENST00000612497 EIF4G2P78344 907 aaKnown RBP eCLIP13.77□□□□□ -0.21
SSX3-204ENST00000612497 ZNF296Q8WUU4 475 aaPredicted RBP13.77□□□□□ -0.21
SSX3-204ENST00000612497 RTF1Q92541 710 aaKnown RBP13.77□□□□□ -0.21
SSX3-204ENST00000612497 PHACTR3Q96KR7 559 aa13.77□□□□□ -0.21
SSX3-204ENST00000612497 ABCC4O15439 1325 aa13.76□□□□□ -0.21
SSX3-204ENST00000612497 NTSR2O95665 410 aa13.76□□□□□ -0.21
SSX3-204ENST00000612497 TBC1D8O95759 1140 aa13.76□□□□□ -0.21
SSX3-204ENST00000612497 TTLL7Q6ZT98 887 aa13.76□□□□□ -0.21
SSX3-204ENST00000612497 MCM10Q7L590 875 aa13.76□□□□□ -0.21
SSX3-204ENST00000612497 SP8Q8IXZ3 490 aa13.76□□□□□ -0.21
SSX3-204ENST00000612497 DPF2Q92785 391 aa13.76□□□□□ -0.21
SSX3-204ENST00000612497 ZBTB3Q9H5J0 574 aa13.76□□□□□ -0.21
SSX3-204ENST00000612497 BBOX1O75936 387 aa13.75□□□□□ -0.21
SSX3-204ENST00000612497 EGFRP00533 1210 aa13.75□□□□□ -0.21
SSX3-204ENST00000612497 PRKAR2BP31323 418 aa13.75□□□□□ -0.21
SSX3-204ENST00000612497 CC2D1BQ5T0F9 858 aaKnown RBP13.75□□□□□ -0.21
SSX3-204ENST00000612497 FBXO46Q6PJ61 603 aaPredicted RBP13.75□□□□□ -0.21
SSX3-204ENST00000612497 PPP1R42Q7Z4L9 355 aa13.75□□□□□ -0.21
SSX3-204ENST00000612497 RASAL3Q86YV0 1011 aa13.75□□□□□ -0.21
SSX3-204ENST00000612497 SULF1Q8IWU6 871 aa13.75□□□□□ -0.21
SSX3-204ENST00000612497 RRP7AQ9Y3A4 280 aaKnown RBP13.75□□□□□ -0.21
SSX3-204ENST00000612497 LAMB4A4D0S4 1761 aa13.75□□□□□ -0.21
SSX3-204ENST00000612497 PSMD14O00487 310 aa13.74□□□□□ -0.21
SSX3-204ENST00000612497 MYL6BP14649 208 aa13.74□□□□□ -0.21
SSX3-204ENST00000612497 FXR1P51114 621 aaKnown RBP eCLIP13.74□□□□□ -0.21
SSX3-204ENST00000612497 ZNF34Q8IZ26 560 aa13.74□□□□□ -0.21
SSX3-204ENST00000612497 COL3A1P02461 1466 aaPredicted RBP13.74□□□□□ -0.21
SSX3-204ENST00000612497 DCTN1Q14203 1278 aa13.73□□□□□ -0.21
SSX3-204ENST00000612497 CDCA5Q96FF9 252 aa13.73□□□□□ -0.21
SSX3-204ENST00000612497 MIS18AQ9NYP9 233 aa13.73□□□□□ -0.21
SSX3-204ENST00000612497 KIF4BQ2VIQ3 1234 aa13.72□□□□□ -0.21
SSX3-204ENST00000612497 PARP10Q53GL7 1025 aa13.72□□□□□ -0.21
SSX3-204ENST00000612497 UTP14AQ9BVJ6 771 aaKnown RBP13.72□□□□□ -0.21
SSX3-204ENST00000612497 DBNDD1Q9H9R9 158 aa13.72□□□□□ -0.21
SSX3-204ENST00000612497 GGA3Q9NZ52 723 aa13.72□□□□□ -0.21
SSX3-204ENST00000612497 TIMELESSQ9UNS1 1208 aa13.72□□□□□ -0.21
SSX3-204ENST00000612497 TAF1P21675 1872 aa13.72□□□□□ -0.21
SSX3-204ENST00000612497 LAMB2P55268 1798 aa13.71□□□□□ -0.21
SSX3-204ENST00000612497 GPR25O00155 361 aa13.71□□□□□ -0.21
SSX3-204ENST00000612497 RPS12P25398 132 aaKnown RBP13.71□□□□□ -0.21
SSX3-204ENST00000612497 CNGB1Q14028 1251 aaPredicted RBP13.71□□□□□ -0.21
SSX3-204ENST00000612497 TAF7Q15545 349 aaPredicted RBP13.71□□□□□ -0.21
SSX3-204ENST00000612497 WASHC4Q2M389 1173 aa13.71□□□□□ -0.21
SSX3-204ENST00000612497 SLC10A5Q5PT55 438 aa13.71□□□□□ -0.21
SSX3-204ENST00000612497 GIGYF2Q6Y7W6 1299 aaKnown RBP13.71□□□□□ -0.21
SSX3-204ENST00000612497 DDX46Q7L014 1031 aaKnown RBP13.71□□□□□ -0.21
SSX3-204ENST00000612497 RSPH6AQ9H0K4 717 aa13.71□□□□□ -0.21
SSX3-204ENST00000612497 ANKRD36CQ5JPF3 1778 aa13.71□□□□□ -0.22
SSX3-204ENST00000612497 ASTN2O75129 1339 aaPredicted RBP13.7□□□□□ -0.22
SSX3-204ENST00000612497 RIMBP2O15034 1052 aa13.7□□□□□ -0.22
SSX3-204ENST00000612497 KIAA0100Q14667 2235 aaKnown RBP13.7□□□□□ -0.22
SSX3-204ENST00000612497 FKTNO75072 461 aa13.69□□□□□ -0.22
SSX3-204ENST00000612497 FKBP1BP68106 108 aa13.69□□□□□ -0.22
SSX3-204ENST00000612497 GRAPQ13588 217 aa13.69□□□□□ -0.22
SSX3-204ENST00000612497 GRAPLQ8TC17 118 aaPredicted RBP13.69□□□□□ -0.22
SSX3-204ENST00000612497 PAPPA2Q9BXP8 1791 aa13.68□□□□□ -0.22
SSX3-204ENST00000612497 DUOX1Q9NRD9 1551 aa13.68□□□□□ -0.22
SSX3-204ENST00000612497 POTEFA5A3E0 1075 aa13.68□□□□□ -0.22
SSX3-204ENST00000612497 HCLS1P14317 486 aaPredicted RBP13.68□□□□□ -0.22
SSX3-204ENST00000612497 NOM1Q5C9Z4 860 aaKnown RBP13.68□□□□□ -0.22
SSX3-204ENST00000612497 KCNQ5Q9NR82 932 aa13.68□□□□□ -0.22
SSX3-204ENST00000612497 CENPFP49454 3210 aa13.68□□□□□ -0.22
SSX3-204ENST00000612497 C6orf229H3BNL8 230 aa13.67□□□□□ -0.22
SSX3-204ENST00000612497 ECE2O60344 883 aa13.67□□□□□ -0.22
SSX3-204ENST00000612497 DOK7Q18PE1 504 aa13.67□□□□□ -0.22
SSX3-204ENST00000612497 ANGEL2Q5VTE6 544 aaKnown RBP13.67□□□□□ -0.22
SSX3-204ENST00000612497 MOB2Q70IA6 237 aa13.67□□□□□ -0.22
SSX3-204ENST00000612497 NSFL1CQ9UNZ2 370 aaKnown RBP13.67□□□□□ -0.22
SSX3-204ENST00000612497 HTTP42858 3142 aa13.66□□□□□ -0.22
SSX3-204ENST00000612497 UBE2Q2LH0YL09 131 aa13.66□□□□□ -0.22
SSX3-204ENST00000612497 HTATSF1O43719 755 aaKnown RBP13.66□□□□□ -0.22
SSX3-204ENST00000612497 TM4SF4P48230 202 aa13.66□□□□□ -0.22
SSX3-204ENST00000612497 MKRN3Q13064 507 aaKnown RBP13.66□□□□□ -0.22
SSX3-204ENST00000612497 SCARF1Q14162 830 aa13.66□□□□□ -0.22
SSX3-204ENST00000612497 INTS3Q68E01 1043 aaKnown RBP13.66□□□□□ -0.22
SSX3-204ENST00000612497 TMC4Q7Z404 712 aa13.66□□□□□ -0.22
SSX3-204ENST00000612497 RTL9Q8NET4 1388 aa13.66□□□□□ -0.22
SSX3-204ENST00000612497 PER1O15534 1290 aaPredicted RBP13.65□□□□□ -0.22
SSX3-204ENST00000612497 U2AF1L5P0DN76 240 aaPredicted RBP13.65□□□□□ -0.22
SSX3-204ENST00000612497 U2AF1Q01081 240 aaKnown RBP eCLIP13.65□□□□□ -0.22
SSX3-204ENST00000612497 TTLL12Q14166 644 aaPredicted RBP13.65□□□□□ -0.22
SSX3-204ENST00000612497 CFAP53Q96M91 514 aa13.65□□□□□ -0.22
SSX3-204ENST00000612497 COLQQ9Y215 455 aaPredicted RBP13.65□□□□□ -0.22
SSX3-204ENST00000612497 NUDCQ9Y266 331 aa13.65□□□□□ -0.22
SSX3-204ENST00000612497 SCN9AQ15858 1988 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms