RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 SUCLG2Q96I99 432 aa20.03■□□□□ 0.8
TNIP1-220ENST00000610535 DBF4Q9UBU7 674 aaPredicted RBP20.03■□□□□ 0.8
TNIP1-220ENST00000610535 CLIP2Q9UDT6 1046 aa20.03■□□□□ 0.8
TNIP1-220ENST00000610535 NPHP4O75161 1426 aaPredicted RBP20.02■□□□□ 0.8
TNIP1-220ENST00000610535 ANKRD1Q15327 319 aa20.02■□□□□ 0.8
TNIP1-220ENST00000610535 RNF20Q5VTR2 975 aa20.02■□□□□ 0.8
TNIP1-220ENST00000610535 KLHDC4Q8TBB5 520 aa20.02■□□□□ 0.8
TNIP1-220ENST00000610535 CEBPZQ03701 1054 aaKnown RBP20.02■□□□□ 0.79
TNIP1-220ENST00000610535 G3BP1Q13283 466 aaKnown RBP eCLIP20.02■□□□□ 0.79
TNIP1-220ENST00000610535 BICC1Q9H694 974 aaKnown RBP20.02■□□□□ 0.79
TNIP1-220ENST00000610535 SETD1BQ9UPS6 1966 aaKnown RBP20.01■□□□□ 0.79
TNIP1-220ENST00000610535 ARID5BQ14865 1188 aa20.01■□□□□ 0.79
TNIP1-220ENST00000610535 SMTNL1A8MU46 457 aa20.01■□□□□ 0.79
TNIP1-220ENST00000610535 HIP1O00291 1037 aa20.01■□□□□ 0.79
TNIP1-220ENST00000610535 PDIA4P13667 645 aaKnown RBP20.01■□□□□ 0.79
TNIP1-220ENST00000610535 TPD52L1Q16890 204 aaPredicted RBP20.01■□□□□ 0.79
TNIP1-220ENST00000610535 KSR2Q6VAB6 950 aa20.01■□□□□ 0.79
TNIP1-220ENST00000610535 DIP2AQ14689 1571 aa20■□□□□ 0.79
TNIP1-220ENST00000610535 ALDH1L1O75891 902 aa20■□□□□ 0.79
TNIP1-220ENST00000610535 ZNF592Q92610 1267 aa20■□□□□ 0.79
TNIP1-220ENST00000610535 BRF1Q92994 677 aa20■□□□□ 0.79
TNIP1-220ENST00000610535 AIMP1Q12904 312 aaKnown RBP19.99■□□□□ 0.79
TNIP1-220ENST00000610535 SNRKQ9NRH2 765 aa19.99■□□□□ 0.79
TNIP1-220ENST00000610535 CHGBP05060 677 aa19.99■□□□□ 0.79
TNIP1-220ENST00000610535 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.99■□□□□ 0.79
TNIP1-220ENST00000610535 A0A087WWV3 80 aa19.98■□□□□ 0.79
TNIP1-220ENST00000610535 ZNF530Q6P9A1 599 aaPredicted RBP19.98■□□□□ 0.79
TNIP1-220ENST00000610535 ANKLE2Q86XL3 938 aa19.98■□□□□ 0.79
TNIP1-220ENST00000610535 ARHGAP23Q9P227 1491 aa19.98■□□□□ 0.79
TNIP1-220ENST00000610535 GRM8O00222 908 aa19.98■□□□□ 0.79
TNIP1-220ENST00000610535 RESTQ13127 1097 aa19.98■□□□□ 0.79
TNIP1-220ENST00000610535 CCDC112Q8NEF3 446 aa19.98■□□□□ 0.79
TNIP1-220ENST00000610535 LRRC59Q96AG4 307 aaKnown RBP19.98■□□□□ 0.79
TNIP1-220ENST00000610535 NDUFB9Q9Y6M9 179 aa19.98■□□□□ 0.79
TNIP1-220ENST00000610535 USP27XA6NNY8 438 aa19.97■□□□□ 0.79
TNIP1-220ENST00000610535 TAF5LO75529 589 aa19.97■□□□□ 0.79
TNIP1-220ENST00000610535 C11orf57Q6ZUT1 292 aaPredicted RBP19.97■□□□□ 0.79
TNIP1-220ENST00000610535 CTNNA3Q9UI47 895 aa19.97■□□□□ 0.79
TNIP1-220ENST00000610535 SLIT1O75093 1534 aa19.97■□□□□ 0.79
TNIP1-220ENST00000610535 GIGYF1O75420 1035 aaPredicted RBP19.97■□□□□ 0.79
TNIP1-220ENST00000610535 FOSBP53539 338 aa19.97■□□□□ 0.79
TNIP1-220ENST00000610535 ALDH8A1Q9H2A2 487 aaPredicted RBP19.97■□□□□ 0.79
TNIP1-220ENST00000610535 MED23Q9ULK4 1368 aa19.97■□□□□ 0.79
TNIP1-220ENST00000610535 FEZ1Q99689 392 aa19.96■□□□□ 0.79
TNIP1-220ENST00000610535 CHMP4AQ9BY43 222 aa19.96■□□□□ 0.79
TNIP1-220ENST00000610535 LRRC2Q9BYS8 371 aa19.96■□□□□ 0.79
TNIP1-220ENST00000610535 FTOQ9C0B1 505 aaKnown RBP eCLIP19.96■□□□□ 0.799e-10■■□□□ 12.2
TNIP1-220ENST00000610535 H3BQV1 296 aa19.96■□□□□ 0.79
TNIP1-220ENST00000610535 IQCB1Q15051 598 aa19.96■□□□□ 0.79
TNIP1-220ENST00000610535 IFFO2Q5TF58 517 aa19.96■□□□□ 0.79
TNIP1-220ENST00000610535 GTF3C6Q969F1 213 aa19.96■□□□□ 0.79
TNIP1-220ENST00000610535 ORAI2Q96SN7 254 aa19.96■□□□□ 0.79
TNIP1-220ENST00000610535 PHF8Q9UPP1 1060 aa19.96■□□□□ 0.79
TNIP1-220ENST00000610535 LRRC8AQ8IWT6 810 aa19.96■□□□□ 0.79
TNIP1-220ENST00000610535 OGFRQ9NZT2 677 aa19.96■□□□□ 0.79
TNIP1-220ENST00000610535 PAXBP1Q9Y5B6 917 aa19.96■□□□□ 0.79
TNIP1-220ENST00000610535 PSME1Q06323 249 aa19.95■□□□□ 0.78
TNIP1-220ENST00000610535 Q6ZUG5 572 aa19.95■□□□□ 0.78
TNIP1-220ENST00000610535 IP6K1Q92551 441 aa19.95■□□□□ 0.78
TNIP1-220ENST00000610535 CHD2O14647 1828 aaKnown RBP19.95■□□□□ 0.78
TNIP1-220ENST00000610535 GOLGA6L19H0YKK7 550 aa19.95■□□□□ 0.78
TNIP1-220ENST00000610535 HSP90B1P14625 803 aaKnown RBP19.95■□□□□ 0.78
TNIP1-220ENST00000610535 CEP135Q66GS9 1140 aa19.95■□□□□ 0.78
TNIP1-220ENST00000610535 CCDC129Q6ZRS4 1044 aa19.95■□□□□ 0.78
TNIP1-220ENST00000610535 LINS1Q8NG48 757 aa19.95■□□□□ 0.78
TNIP1-220ENST00000610535 COL15A1P39059 1388 aa19.94■□□□□ 0.78
TNIP1-220ENST00000610535 TSGA10IPQ3SY00 556 aa19.94■□□□□ 0.78
TNIP1-220ENST00000610535 NEK1Q96PY6 1258 aa19.94■□□□□ 0.78
TNIP1-220ENST00000610535 HMG20BQ9P0W2 317 aa19.94■□□□□ 0.78
TNIP1-220ENST00000610535 USP16Q9Y5T5 823 aa19.94■□□□□ 0.78
TNIP1-220ENST00000610535 KIF20AO95235 890 aa19.94■□□□□ 0.78
TNIP1-220ENST00000610535 AKAP4Q5JQC9 854 aa19.94■□□□□ 0.78
TNIP1-220ENST00000610535 SEC62Q99442 399 aaKnown RBP19.94■□□□□ 0.78
TNIP1-220ENST00000610535 ADGRL3Q9HAR2 1447 aa19.94■□□□□ 0.78
TNIP1-220ENST00000610535 PPFIA3O75145 1194 aa19.93■□□□□ 0.78
TNIP1-220ENST00000610535 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.93■□□□□ 0.78
TNIP1-220ENST00000610535 HDAC5Q9UQL6 1122 aa19.93■□□□□ 0.78
TNIP1-220ENST00000610535 V9GYY5 206 aaPredicted RBP19.93■□□□□ 0.78
TNIP1-220ENST00000610535 SYCP1Q15431 976 aa19.93■□□□□ 0.78
TNIP1-220ENST00000610535 FILIP1Q7Z7B0 1213 aa19.93■□□□□ 0.78
TNIP1-220ENST00000610535 RNMTO43148 476 aaKnown RBP19.92■□□□□ 0.78
TNIP1-220ENST00000610535 ERCC4Q92889 916 aaPredicted RBP19.92■□□□□ 0.78
TNIP1-220ENST00000610535 TRMT1Q9NXH9 659 aaKnown RBP19.92■□□□□ 0.78
TNIP1-220ENST00000610535 MARF1Q9Y4F3 1742 aaKnown RBP19.92■□□□□ 0.78
TNIP1-220ENST00000610535 MED1Q15648 1581 aaPredicted RBP19.92■□□□□ 0.78
TNIP1-220ENST00000610535 ADD1P35611 737 aaKnown RBP19.92■□□□□ 0.78
TNIP1-220ENST00000610535 EPHA10Q5JZY3 1008 aa19.92■□□□□ 0.78
TNIP1-220ENST00000610535 USPL1Q5W0Q7 1092 aa19.92■□□□□ 0.78
TNIP1-220ENST00000610535 CCAR1Q8IX12 1150 aaKnown RBP19.92■□□□□ 0.78
TNIP1-220ENST00000610535 FBXW7Q969H0 707 aa19.92■□□□□ 0.78
TNIP1-220ENST00000610535 GOLPH3LQ9H4A5 285 aa19.92■□□□□ 0.78
TNIP1-220ENST00000610535 CFAP45Q9UL16 551 aa19.92■□□□□ 0.78
TNIP1-220ENST00000610535 A0A0U1RQG5 324 aaPredicted RBP19.91■□□□□ 0.78
TNIP1-220ENST00000610535 IGKV5-2P06315 115 aa19.91■□□□□ 0.78
TNIP1-220ENST00000610535 SKILP12757 684 aa19.91■□□□□ 0.78
TNIP1-220ENST00000610535 SCRN1Q12765 414 aa19.91■□□□□ 0.78
TNIP1-220ENST00000610535 KDM3BQ7LBC6 1761 aa19.91■□□□□ 0.78
TNIP1-220ENST00000610535 CDC25BP30305 580 aa19.91■□□□□ 0.78
TNIP1-220ENST00000610535 CGNQ9P2M7 1197 aaKnown RBP19.91■□□□□ 0.78
TNIP1-220ENST00000610535 CYP21A2P08686 494 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms