RNA–Protein interactions for RNA: ENST00000605204.1

SRSF4-206, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 1 (best)

Gene SRSF4, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-206ENST00000605204 ABCC4O15439 1325 aa24.5■■□□□ 1.51
SRSF4-206ENST00000605204 POTECB2RU33 542 aa24.5■■□□□ 1.51
SRSF4-206ENST00000605204 CT47B1P0C2W7 299 aaPredicted RBP24.5■■□□□ 1.51
SRSF4-206ENST00000605204 SYNE4Q8N205 404 aa24.5■■□□□ 1.51
SRSF4-206ENST00000605204 PSMD1Q99460 953 aa24.5■■□□□ 1.51
SRSF4-206ENST00000605204 CACNA1FO60840 1977 aa24.5■■□□□ 1.51
SRSF4-206ENST00000605204 CDHR2Q9BYE9 1310 aa24.49■■□□□ 1.51
SRSF4-206ENST00000605204 GRAPQ13588 217 aa24.49■■□□□ 1.51
SRSF4-206ENST00000605204 LINS1Q8NG48 757 aa24.49■■□□□ 1.51
SRSF4-206ENST00000605204 GRAPLQ8TC17 118 aaPredicted RBP24.49■■□□□ 1.51
SRSF4-206ENST00000605204 ATP6V0A2Q9Y487 856 aa24.49■■□□□ 1.51
SRSF4-206ENST00000605204 IGKV5-2P06315 115 aa24.48■■□□□ 1.51
SRSF4-206ENST00000605204 SNED1Q8TER0 1413 aa24.48■■□□□ 1.51
SRSF4-206ENST00000605204 LAMB2P55268 1798 aa24.47■■□□□ 1.51
SRSF4-206ENST00000605204 NEURL1BA8MQ27 555 aa24.47■■□□□ 1.51
SRSF4-206ENST00000605204 VEGFAP15692 232 aaPredicted RBP24.47■■□□□ 1.51
SRSF4-206ENST00000605204 TRMT2AQ8IZ69 625 aaKnown RBP24.47■■□□□ 1.51
SRSF4-206ENST00000605204 PDE8AO60658 829 aa24.46■■□□□ 1.51
SRSF4-206ENST00000605204 CCDC152Q4G0S7 254 aa24.45■■□□□ 1.5
SRSF4-206ENST00000605204 RTL5Q5HYW3 569 aaPredicted RBP24.45■■□□□ 1.5
SRSF4-206ENST00000605204 DDX60Q8IY21 1712 aaKnown RBP24.45■■□□□ 1.5
SRSF4-206ENST00000605204 DPY19L2Q6NUT2 758 aa24.44■■□□□ 1.5
SRSF4-206ENST00000605204 SP8Q8IXZ3 490 aa24.44■■□□□ 1.5
SRSF4-206ENST00000605204 VPS33BQ9H267 617 aa24.44■■□□□ 1.5
SRSF4-206ENST00000605204 GCKRQ14397 625 aa24.43■■□□□ 1.5
SRSF4-206ENST00000605204 CWF19L2Q2TBE0 894 aaKnown RBP24.43■■□□□ 1.5
SRSF4-206ENST00000605204 ALDH1L2Q3SY69 923 aa24.43■■□□□ 1.5
SRSF4-206ENST00000605204 SUPT20HQ8NEM7 779 aa24.43■■□□□ 1.5
SRSF4-206ENST00000605204 CDCA7LQ96GN5 454 aa24.43■■□□□ 1.5
SRSF4-206ENST00000605204 PTPRCP08575 1304 aa24.43■■□□□ 1.5
SRSF4-206ENST00000605204 OLFM4Q6UX06 510 aa24.42■■□□□ 1.5
SRSF4-206ENST00000605204 IARSP41252 1262 aaKnown RBP24.42■■□□□ 1.5
SRSF4-206ENST00000605204 COL13A1Q5TAT6 717 aaPredicted RBP24.42■■□□□ 1.5
SRSF4-206ENST00000605204 POTEIP0CG38 1075 aa24.41■■□□□ 1.5
SRSF4-206ENST00000605204 POTEJP0CG39 1038 aa24.41■■□□□ 1.5
SRSF4-206ENST00000605204 ZNF277Q9NRM2 450 aaPredicted RBP24.41■■□□□ 1.5
SRSF4-206ENST00000605204 H7C1W4 665 aa24.4■■□□□ 1.5
SRSF4-206ENST00000605204 CTSWP56202 376 aa24.4■■□□□ 1.5
SRSF4-206ENST00000605204 RTL9Q8NET4 1388 aa24.39■■□□□ 1.5
SRSF4-206ENST00000605204 BEND3Q5T5X7 828 aa24.39■■□□□ 1.49
SRSF4-206ENST00000605204 DPP8Q6V1X1 898 aaPredicted RBP24.39■■□□□ 1.49
SRSF4-206ENST00000605204 UBE3BQ7Z3V4 1068 aa24.39■■□□□ 1.49
SRSF4-206ENST00000605204 MRPL50Q8N5N7 158 aaKnown RBP24.39■■□□□ 1.49
SRSF4-206ENST00000605204 JDP2Q8WYK2 163 aa24.39■■□□□ 1.49
SRSF4-206ENST00000605204 PLA2G12BQ9BX93 195 aa24.39■■□□□ 1.49
SRSF4-206ENST00000605204 RTFDC1Q9BY42 306 aaPredicted RBP24.39■■□□□ 1.49
SRSF4-206ENST00000605204 ADAMTSL1Q8N6G6 1762 aa24.38■■□□□ 1.49
SRSF4-206ENST00000605204 ALDH1L1O75891 902 aa24.38■■□□□ 1.49
SRSF4-206ENST00000605204 RPS8P62241 208 aaKnown RBP24.38■■□□□ 1.49
SRSF4-206ENST00000605204 SSH1Q8WYL5 1049 aa24.38■■□□□ 1.49
SRSF4-206ENST00000605204 SCN4AP35499 1836 aa24.38■■□□□ 1.49
SRSF4-206ENST00000605204 F6X3S4 739 aa24.37■■□□□ 1.49
SRSF4-206ENST00000605204 DDNO94850 711 aaPredicted RBP24.37■■□□□ 1.49
SRSF4-206ENST00000605204 HNRNPUQ00839 825 aaKnown RBP eCLIP24.37■■□□□ 1.49
SRSF4-206ENST00000605204 MPNDQ8N594 471 aa24.37■■□□□ 1.49
SRSF4-206ENST00000605204 CELF1Q92879 486 aaKnown RBP24.37■■□□□ 1.49
SRSF4-206ENST00000605204 CDC5LQ99459 802 aaKnown RBP24.37■■□□□ 1.49
SRSF4-206ENST00000605204 LRRC37AA6NMS7 1700 aa24.35■■□□□ 1.49
SRSF4-206ENST00000605204 COL4A5P29400 1685 aa24.35■■□□□ 1.49
SRSF4-206ENST00000605204 ZNF541Q9H0D2 1346 aa24.35■■□□□ 1.49
SRSF4-206ENST00000605204 SRCIN1Q9C0H9 1055 aa24.35■■□□□ 1.49
SRSF4-206ENST00000605204 SMC4Q9NTJ3 1288 aa24.35■■□□□ 1.49
SRSF4-206ENST00000605204 FZD9O00144 591 aa24.34■■□□□ 1.49
SRSF4-206ENST00000605204 CASP7P55210 303 aa24.34■■□□□ 1.49
SRSF4-206ENST00000605204 LARGE2Q8N3Y3 721 aa24.34■■□□□ 1.49
SRSF4-206ENST00000605204 TTLL11Q8NHH1 800 aa24.34■■□□□ 1.49
SRSF4-206ENST00000605204 GRM8O00222 908 aa24.33■■□□□ 1.49
SRSF4-206ENST00000605204 HSPA1AP0DMV8 641 aaKnown RBP24.33■■□□□ 1.49
SRSF4-206ENST00000605204 HSPA1BP0DMV9 641 aaKnown RBP24.33■■□□□ 1.49
SRSF4-206ENST00000605204 BRPF1P55201 1214 aaPredicted RBP24.33■■□□□ 1.49
SRSF4-206ENST00000605204 SLC4A10Q6U841 1118 aa24.33■■□□□ 1.49
SRSF4-206ENST00000605204 ANKRD18AQ8IVF6 992 aa24.33■■□□□ 1.49
SRSF4-206ENST00000605204 JARID2Q92833 1246 aaPredicted RBP24.33■■□□□ 1.49
SRSF4-206ENST00000605204 PPIP5K2O43314 1243 aa24.32■■□□□ 1.48
SRSF4-206ENST00000605204 NIM1KQ8IY84 436 aa24.32■■□□□ 1.48
SRSF4-206ENST00000605204 SLC51AQ86UW1 340 aa24.31■■□□□ 1.48
SRSF4-206ENST00000605204 L3MBTL3Q96JM7 780 aaPredicted RBP24.31■■□□□ 1.48
SRSF4-206ENST00000605204 SEC31BQ9NQW1 1179 aa24.31■■□□□ 1.48
SRSF4-206ENST00000605204 ZBED9Q6R2W3 1325 aa24.31■■□□□ 1.48
SRSF4-206ENST00000605204 IQCA1LA6NCM1 817 aa24.3■■□□□ 1.48
SRSF4-206ENST00000605204 EIF6P56537 245 aaKnown RBP24.3■■□□□ 1.48
SRSF4-206ENST00000605204 KIAA2012Q0VF49 1180 aa24.3■■□□□ 1.48
SRSF4-206ENST00000605204 CHADLQ6NUI6 762 aa24.3■■□□□ 1.48
SRSF4-206ENST00000605204 C9orf78Q9NZ63 289 aaPredicted RBP24.3■■□□□ 1.48
SRSF4-206ENST00000605204 KIF16BQ96L93 1317 aa24.3■■□□□ 1.48
SRSF4-206ENST00000605204 LTBP1Q14766 1721 aa24.3■■□□□ 1.48
SRSF4-206ENST00000605204 GPC2Q8N158 579 aa24.29■■□□□ 1.48
SRSF4-206ENST00000605204 EYA3Q99504 573 aa24.29■■□□□ 1.48
SRSF4-206ENST00000605204 BCL2L13Q9BXK5 485 aa24.29■■□□□ 1.48
SRSF4-206ENST00000605204 GREM2Q9H772 168 aa24.29■■□□□ 1.48
SRSF4-206ENST00000605204 PODXL2Q9NZ53 605 aa24.29■■□□□ 1.48
SRSF4-206ENST00000605204 NSFL1CQ9UNZ2 370 aaKnown RBP24.29■■□□□ 1.48
SRSF4-206ENST00000605204 CSF1RP07333 972 aa24.29■■□□□ 1.48
SRSF4-206ENST00000605204 AOC3Q16853 763 aa24.28■■□□□ 1.48
SRSF4-206ENST00000605204 CCDC85AQ96PX6 553 aaPredicted RBP24.28■■□□□ 1.48
SRSF4-206ENST00000605204 BSDC1Q9NW68 430 aaPredicted RBP24.28■■□□□ 1.48
SRSF4-206ENST00000605204 IGHMBP2P38935 993 aaKnown RBP24.27■■□□□ 1.48
SRSF4-206ENST00000605204 API5Q9BZZ5 524 aaKnown RBP24.27■■□□□ 1.48
SRSF4-206ENST00000605204 ZNRF3Q9ULT6 936 aa24.27■■□□□ 1.48
SRSF4-206ENST00000605204 UTYO14607 1347 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms