RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 G2E3Q7L622 706 aa14.71□□□□□ -0.05
CCDC12-209ENST00000604164 LINS1Q8NG48 757 aa14.71□□□□□ -0.05
CCDC12-209ENST00000604164 NMRK2Q9NPI5 230 aa14.71□□□□□ -0.05
CCDC12-209ENST00000604164 TIAM2Q8IVF5 1701 aa14.7□□□□□ -0.06
CCDC12-209ENST00000604164 IGKV5-2P06315 115 aa14.7□□□□□ -0.06
CCDC12-209ENST00000604164 CT47B1P0C2W7 299 aaPredicted RBP14.7□□□□□ -0.06
CCDC12-209ENST00000604164 OLFM4Q6UX06 510 aa14.7□□□□□ -0.06
CCDC12-209ENST00000604164 DPP8Q6V1X1 898 aaPredicted RBP14.7□□□□□ -0.06
CCDC12-209ENST00000604164 DICER1Q9UPY3 1922 aaKnown RBP14.7□□□□□ -0.06
CCDC12-209ENST00000604164 MPNDQ8N594 471 aa14.69□□□□□ -0.06
CCDC12-209ENST00000604164 RBM46Q8TBY0 533 aaKnown RBP14.69□□□□□ -0.06
CCDC12-209ENST00000604164 RRAGCQ9HB90 399 aa14.69□□□□□ -0.06
CCDC12-209ENST00000604164 CCDC88AQ3V6T2 1871 aa14.69□□□□□ -0.06
CCDC12-209ENST00000604164 SNED1Q8TER0 1413 aa14.68□□□□□ -0.06
CCDC12-209ENST00000604164 LAMB2P55268 1798 aa14.68□□□□□ -0.06
CCDC12-209ENST00000604164 IQCA1LA6NCM1 817 aa14.68□□□□□ -0.06
CCDC12-209ENST00000604164 EIF6P56537 245 aaKnown RBP14.68□□□□□ -0.06
CCDC12-209ENST00000604164 RPS8P62241 208 aaKnown RBP14.68□□□□□ -0.06
CCDC12-209ENST00000604164 GCKRQ14397 625 aa14.68□□□□□ -0.06
CCDC12-209ENST00000604164 CWF19L2Q2TBE0 894 aaKnown RBP14.68□□□□□ -0.06
CCDC12-209ENST00000604164 MIER1Q8N108 512 aa14.68□□□□□ -0.06
CCDC12-209ENST00000604164 LARGE2Q8N3Y3 721 aa14.68□□□□□ -0.06
CCDC12-209ENST00000604164 RTFDC1Q9BY42 306 aaPredicted RBP14.68□□□□□ -0.06
CCDC12-209ENST00000604164 DDX60Q8IY21 1712 aaKnown RBP14.68□□□□□ -0.06
CCDC12-209ENST00000604164 H7C1W4 665 aa14.67□□□□□ -0.06
CCDC12-209ENST00000604164 FZD9O00144 591 aa14.67□□□□□ -0.06
CCDC12-209ENST00000604164 PPIP5K2O43314 1243 aa14.67□□□□□ -0.06
CCDC12-209ENST00000604164 CTSWP56202 376 aa14.67□□□□□ -0.06
CCDC12-209ENST00000604164 FSTL1Q12841 308 aa14.67□□□□□ -0.06
CCDC12-209ENST00000604164 NIM1KQ8IY84 436 aa14.67□□□□□ -0.06
CCDC12-209ENST00000604164 CDC5LQ99459 802 aaKnown RBP14.67□□□□□ -0.06
CCDC12-209ENST00000604164 PTPRCP08575 1304 aa14.66□□□□□ -0.06
CCDC12-209ENST00000604164 ALDH1L2Q3SY69 923 aa14.66□□□□□ -0.06
CCDC12-209ENST00000604164 UBE3BQ7Z3V4 1068 aa14.66□□□□□ -0.06
CCDC12-209ENST00000604164 ANKRD18AQ8IVF6 992 aa14.66□□□□□ -0.06
CCDC12-209ENST00000604164 ALDH1L1O75891 902 aa14.65□□□□□ -0.06
CCDC12-209ENST00000604164 TRMT2AQ8IZ69 625 aaKnown RBP14.65□□□□□ -0.06
CCDC12-209ENST00000604164 GPC2Q8N158 579 aa14.65□□□□□ -0.06
CCDC12-209ENST00000604164 SMC1BQ8NDV3 1235 aa14.65□□□□□ -0.06
CCDC12-209ENST00000604164 CELF1Q92879 486 aaKnown RBP14.65□□□□□ -0.06
CCDC12-209ENST00000604164 L3MBTL3Q96JM7 780 aaPredicted RBP14.65□□□□□ -0.06
CCDC12-209ENST00000604164 EYA3Q99504 573 aa14.65□□□□□ -0.06
CCDC12-209ENST00000604164 PLA2G12BQ9BX93 195 aa14.65□□□□□ -0.06
CCDC12-209ENST00000604164 WDR90Q96KV7 1748 aa14.64□□□□□ -0.07
CCDC12-209ENST00000604164 RTL9Q8NET4 1388 aa14.64□□□□□ -0.07
CCDC12-209ENST00000604164 DDNO94850 711 aaPredicted RBP14.64□□□□□ -0.07
CCDC12-209ENST00000604164 BEND3Q5T5X7 828 aa14.64□□□□□ -0.07
CCDC12-209ENST00000604164 TTLL11Q8NHH1 800 aa14.64□□□□□ -0.07
CCDC12-209ENST00000604164 JARID2Q92833 1246 aaPredicted RBP14.64□□□□□ -0.07
CCDC12-209ENST00000604164 CDCA7LQ96GN5 454 aa14.64□□□□□ -0.07
CCDC12-209ENST00000604164 NSFL1CQ9UNZ2 370 aaKnown RBP14.64□□□□□ -0.07
CCDC12-209ENST00000604164 F6X3S4 739 aa14.63□□□□□ -0.07
CCDC12-209ENST00000604164 HSPA6P17066 643 aa14.63□□□□□ -0.07
CCDC12-209ENST00000604164 KIAA2012Q0VF49 1180 aa14.63□□□□□ -0.07
CCDC12-209ENST00000604164 AOC3Q16853 763 aa14.63□□□□□ -0.07
CCDC12-209ENST00000604164 SLC4A10Q6U841 1118 aa14.63□□□□□ -0.07
CCDC12-209ENST00000604164 MRPL50Q8N5N7 158 aaKnown RBP14.63□□□□□ -0.07
CCDC12-209ENST00000604164 SRCIN1Q9C0H9 1055 aa14.63□□□□□ -0.07
CCDC12-209ENST00000604164 C9orf78Q9NZ63 289 aaPredicted RBP14.63□□□□□ -0.07
CCDC12-209ENST00000604164 ANKIB1Q9P2G1 1089 aa14.63□□□□□ -0.07
CCDC12-209ENST00000604164 ZNRF3Q9ULT6 936 aa14.63□□□□□ -0.07
CCDC12-209ENST00000604164 C6orf229H3BNL8 230 aa14.62□□□□□ -0.07
CCDC12-209ENST00000604164 IGHMBP2P38935 993 aaKnown RBP14.62□□□□□ -0.07
CCDC12-209ENST00000604164 WASHC4Q2M389 1173 aa14.62□□□□□ -0.07
CCDC12-209ENST00000604164 SEC31BQ9NQW1 1179 aa14.62□□□□□ -0.07
CCDC12-209ENST00000604164 SMC4Q9NTJ3 1288 aa14.62□□□□□ -0.07
CCDC12-209ENST00000604164 PODXL2Q9NZ53 605 aa14.62□□□□□ -0.07
CCDC12-209ENST00000604164 ZNF541Q9H0D2 1346 aa14.62□□□□□ -0.07
CCDC12-209ENST00000604164 LRRC37AA6NMS7 1700 aa14.61□□□□□ -0.07
CCDC12-209ENST00000604164 GRM8O00222 908 aa14.61□□□□□ -0.07
CCDC12-209ENST00000604164 LMOD1P29536 600 aaPredicted RBP14.61□□□□□ -0.07
CCDC12-209ENST00000604164 CASP7P55210 303 aa14.61□□□□□ -0.07
CCDC12-209ENST00000604164 TNIP1Q15025 636 aa14.61□□□□□ -0.07
CCDC12-209ENST00000604164 PNMA8AQ86V59 439 aaPredicted RBP14.61□□□□□ -0.07
CCDC12-209ENST00000604164 SSH1Q8WYL5 1049 aa14.61□□□□□ -0.07
CCDC12-209ENST00000604164 CCDC85AQ96PX6 553 aaPredicted RBP14.61□□□□□ -0.07
CCDC12-209ENST00000604164 BSDC1Q9NW68 430 aaPredicted RBP14.61□□□□□ -0.07
CCDC12-209ENST00000604164 HACL1Q9UJ83 578 aa14.61□□□□□ -0.07
CCDC12-209ENST00000604164 GGA1Q9UJY5 639 aa14.61□□□□□ -0.07
CCDC12-209ENST00000604164 CSF1RP07333 972 aa14.6□□□□□ -0.07
CCDC12-209ENST00000604164 APLP1P51693 650 aa14.6□□□□□ -0.07
CCDC12-209ENST00000604164 GPSM2P81274 684 aa14.6□□□□□ -0.07
CCDC12-209ENST00000604164 HNRNPUQ00839 825 aaKnown RBP eCLIP14.6□□□□□ -0.073e-6■□□□□ 9.8
CCDC12-209ENST00000604164 ZC3H12CQ9C0D7 883 aaKnown RBP14.6□□□□□ -0.07
CCDC12-209ENST00000604164 GREM2Q9H772 168 aa14.6□□□□□ -0.07
CCDC12-209ENST00000604164 GJA3Q9Y6H8 435 aa14.6□□□□□ -0.07
CCDC12-209ENST00000604164 XDHP47989 1333 aa14.6□□□□□ -0.07
CCDC12-209ENST00000604164 ANKRD18BA2A2Z9 1011 aa14.59□□□□□ -0.07
CCDC12-209ENST00000604164 POTECB2RU33 542 aa14.59□□□□□ -0.07
CCDC12-209ENST00000604164 G3V3G9 751 aa14.59□□□□□ -0.07
CCDC12-209ENST00000604164 ITGA6P23229 1130 aa14.59□□□□□ -0.07
CCDC12-209ENST00000604164 ATP2B4P23634 1241 aa14.59□□□□□ -0.07
CCDC12-209ENST00000604164 DCAF8Q5TAQ9 597 aa14.59□□□□□ -0.07
CCDC12-209ENST00000604164 TBC1D16Q8TBP0 767 aa14.59□□□□□ -0.07
CCDC12-209ENST00000604164 MPHOSPH8Q99549 860 aa14.59□□□□□ -0.07
CCDC12-209ENST00000604164 TAF1DQ9H5J8 278 aaPredicted RBP14.59□□□□□ -0.07
CCDC12-209ENST00000604164 MYH3P11055 1940 aa14.58□□□□□ -0.07
CCDC12-209ENST00000604164 SCN4AP35499 1836 aa14.58□□□□□ -0.08
CCDC12-209ENST00000604164 UFL1O94874 794 aa14.58□□□□□ -0.08
CCDC12-209ENST00000604164 BRPF1P55201 1214 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms