RNA–Protein interactions for RNA: ENST00000602263.5

FARP1-240, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 867 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-240ENST00000602263 DEFB115Q30KQ5 88 aa13.6□□□□□ -0.23
FARP1-240ENST00000602263 TMC4Q7Z404 712 aa13.6□□□□□ -0.23
FARP1-240ENST00000602263 GRAPLQ8TC17 118 aaPredicted RBP13.6□□□□□ -0.23
FARP1-240ENST00000602263 ADAMTS8Q9UP79 889 aa13.6□□□□□ -0.23
FARP1-240ENST00000602263 RASSF10A6NK89 507 aa13.59□□□□□ -0.23
FARP1-240ENST00000602263 ANKRD13DQ6ZTN6 518 aa13.59□□□□□ -0.23
FARP1-240ENST00000602263 CFAP44Q96MT7 982 aa13.59□□□□□ -0.23
FARP1-240ENST00000602263 ADARB2Q9NS39 739 aaKnown RBP13.59□□□□□ -0.23
FARP1-240ENST00000602263 HYPKQ9NX55 129 aa13.59□□□□□ -0.23
FARP1-240ENST00000602263 GPRC5DQ9NZD1 345 aa13.59□□□□□ -0.23
FARP1-240ENST00000602263 FOXN1O15353 648 aa13.58□□□□□ -0.24
FARP1-240ENST00000602263 CTCFP49711 727 aaPredicted RBP13.58□□□□□ -0.24
FARP1-240ENST00000602263 CALD1Q05682 793 aaKnown RBP13.58□□□□□ -0.24
FARP1-240ENST00000602263 KIAA2012Q0VF49 1180 aa13.58□□□□□ -0.24
FARP1-240ENST00000602263 TNIP1Q15025 636 aa13.58□□□□□ -0.24
FARP1-240ENST00000602263 DUSP27Q5VZP5 1158 aa13.58□□□□□ -0.24
FARP1-240ENST00000602263 CIAPIN1Q6FI81 312 aa13.58□□□□□ -0.24
FARP1-240ENST00000602263 CDHR2Q9BYE9 1310 aa13.58□□□□□ -0.24
FARP1-240ENST00000602263 GMPSP49915 693 aaPredicted RBP13.57□□□□□ -0.24
FARP1-240ENST00000602263 CXCL9Q07325 125 aa13.57□□□□□ -0.24
FARP1-240ENST00000602263 GOLGA2Q08379 1002 aa13.57□□□□□ -0.24
FARP1-240ENST00000602263 PAXIP1Q6ZW49 1069 aaPredicted RBP13.57□□□□□ -0.24
FARP1-240ENST00000602263 ZNF428Q96B54 188 aa13.57□□□□□ -0.24
FARP1-240ENST00000602263 ISCA1Q9BUE6 129 aa13.57□□□□□ -0.24
FARP1-240ENST00000602263 BCL2L13Q9BXK5 485 aa13.57□□□□□ -0.24
FARP1-240ENST00000602263 PRDM10Q9NQV6 1147 aa13.57□□□□□ -0.24
FARP1-240ENST00000602263 ATP5J2-PTCD1G3V325 749 aa13.56□□□□□ -0.24
FARP1-240ENST00000602263 RAD17O75943 681 aa13.56□□□□□ -0.24
FARP1-240ENST00000602263 ECE1P42892 770 aa13.56□□□□□ -0.24
FARP1-240ENST00000602263 MAP2K1Q02750 393 aaPredicted RBP13.56□□□□□ -0.24
FARP1-240ENST00000602263 FAM89AQ96GI7 184 aa13.56□□□□□ -0.24
FARP1-240ENST00000602263 PRKRIP1Q9H875 184 aaPredicted RBP13.56□□□□□ -0.24
FARP1-240ENST00000602263 MBIPQ9NS73 344 aa13.56□□□□□ -0.24
FARP1-240ENST00000602263 DUOX1Q9NRD9 1551 aa13.56□□□□□ -0.24
FARP1-240ENST00000602263 WDR33Q9C0J8 1336 aaKnown RBP13.56□□□□□ -0.24
FARP1-240ENST00000602263 THSD7BQ9C0I4 1608 aa13.55□□□□□ -0.24
FARP1-240ENST00000602263 HSP90B1P14625 803 aaKnown RBP13.55□□□□□ -0.24
FARP1-240ENST00000602263 GNAI1P63096 354 aa13.55□□□□□ -0.24
FARP1-240ENST00000602263 SF3B3Q15393 1217 aaKnown RBP13.55□□□□□ -0.24
FARP1-240ENST00000602263 IFT57Q9NWB7 429 aa13.55□□□□□ -0.24
FARP1-240ENST00000602263 WBP1LQ9NX94 342 aa13.55□□□□□ -0.24
FARP1-240ENST00000602263 POLR2AP24928 1970 aaKnown RBP13.54□□□□□ -0.24
FARP1-240ENST00000602263 TRAF5O00463 557 aa13.54□□□□□ -0.24
FARP1-240ENST00000602263 IRS4O14654 1257 aaPredicted RBP13.54□□□□□ -0.24
FARP1-240ENST00000602263 GRM1Q13255 1194 aa13.54□□□□□ -0.24
FARP1-240ENST00000602263 RTL5Q5HYW3 569 aaPredicted RBP13.54□□□□□ -0.24
FARP1-240ENST00000602263 RIC3Q7Z5B4 369 aa13.54□□□□□ -0.24
FARP1-240ENST00000602263 CHMP4AQ9BY43 222 aa13.54□□□□□ -0.24
FARP1-240ENST00000602263 NSFL1CQ9UNZ2 370 aaKnown RBP13.54□□□□□ -0.24
FARP1-240ENST00000602263 MYH3P11055 1940 aa13.53□□□□□ -0.24
FARP1-240ENST00000602263 C6orf229H3BNL8 230 aa13.53□□□□□ -0.24
FARP1-240ENST00000602263 H7C1D1 291 aa13.53□□□□□ -0.24
FARP1-240ENST00000602263 APAF1O14727 1248 aa13.53□□□□□ -0.24
FARP1-240ENST00000602263 FMR1Q06787 632 aaKnown RBP eCLIP13.53□□□□□ -0.24
FARP1-240ENST00000602263 TRIM28Q13263 835 aaKnown RBP13.53□□□□□ -0.24
FARP1-240ENST00000602263 WASHC4Q2M389 1173 aa13.53□□□□□ -0.24
FARP1-240ENST00000602263 ZC3H15Q8WU90 426 aaKnown RBP13.53□□□□□ -0.24
FARP1-240ENST00000602263 CELF1Q92879 486 aaKnown RBP13.53□□□□□ -0.24
FARP1-240ENST00000602263 CAPNS2Q96L46 248 aa13.53□□□□□ -0.24
FARP1-240ENST00000602263 EYA3Q99504 573 aa13.53□□□□□ -0.24
FARP1-240ENST00000602263 BEGAINQ9BUH8 593 aa13.53□□□□□ -0.24
FARP1-240ENST00000602263 ZNF853P0CG23 659 aa13.52□□□□□ -0.25
FARP1-240ENST00000602263 LBX1P52954 281 aa13.52□□□□□ -0.25
FARP1-240ENST00000602263 CNOT7Q9UIV1 285 aaKnown RBP13.52□□□□□ -0.25
FARP1-240ENST00000602263 TLL2Q9Y6L7 1015 aa13.52□□□□□ -0.25
FARP1-240ENST00000602263 YDJCA8MPS7 323 aa13.51□□□□□ -0.25
FARP1-240ENST00000602263 ELL2O00472 640 aaPredicted RBP13.51□□□□□ -0.25
FARP1-240ENST00000602263 CELF2O95319 508 aaKnown RBP13.51□□□□□ -0.25
FARP1-240ENST00000602263 DDX58O95786 925 aaKnown RBP13.51□□□□□ -0.25
FARP1-240ENST00000602263 CST9Q5W186 159 aa13.51□□□□□ -0.25
FARP1-240ENST00000602263 CYP4F22Q6NT55 531 aa13.51□□□□□ -0.25
FARP1-240ENST00000602263 ZBTB38Q8NAP3 1195 aaPredicted RBP13.51□□□□□ -0.25
FARP1-240ENST00000602263 GPR101Q96P66 508 aaPredicted RBP13.51□□□□□ -0.25
FARP1-240ENST00000602263 GLIS2Q9BZE0 524 aaPredicted RBP13.51□□□□□ -0.25
FARP1-240ENST00000602263 DBNDD1Q9H9R9 158 aa13.51□□□□□ -0.25
FARP1-240ENST00000602263 G3V3G9 751 aa13.5□□□□□ -0.25
FARP1-240ENST00000602263 RIMBP2O15034 1052 aa13.5□□□□□ -0.25
FARP1-240ENST00000602263 HSPA8P11142 646 aaKnown RBP13.5□□□□□ -0.25
FARP1-240ENST00000602263 RPS8P62241 208 aaKnown RBP13.5□□□□□ -0.25
FARP1-240ENST00000602263 GPSM2P81274 684 aa13.5□□□□□ -0.25
FARP1-240ENST00000602263 DCAF8Q5TAQ9 597 aa13.5□□□□□ -0.25
FARP1-240ENST00000602263 CCDC30Q5VVM6 783 aa13.5□□□□□ -0.25
FARP1-240ENST00000602263 CDC37L1Q7L3B6 337 aa13.5□□□□□ -0.25
FARP1-240ENST00000602263 MICALL2Q8IY33 904 aa13.5□□□□□ -0.25
FARP1-240ENST00000602263 CCDC191Q8NCU4 936 aa13.5□□□□□ -0.25
FARP1-240ENST00000602263 TRPM4Q8TD43 1214 aa13.5□□□□□ -0.25
FARP1-240ENST00000602263 DPF2Q92785 391 aa13.5□□□□□ -0.25
FARP1-240ENST00000602263 MYD88Q99836 296 aa13.5□□□□□ -0.25
FARP1-240ENST00000602263 PHAXQ9H814 394 aaKnown RBP13.5□□□□□ -0.25
FARP1-240ENST00000602263 ZNF408Q9H9D4 720 aa13.5□□□□□ -0.25
FARP1-240ENST00000602263 PGAP2Q9UHJ9 254 aa13.5□□□□□ -0.25
FARP1-240ENST00000602263 SCN9AQ15858 1988 aa13.5□□□□□ -0.25
FARP1-240ENST00000602263 COL4A1P02462 1669 aa13.5□□□□□ -0.25
FARP1-240ENST00000602263 CACNA1FO60840 1977 aa13.49□□□□□ -0.25
FARP1-240ENST00000602263 PSME4Q14997 1843 aa13.49□□□□□ -0.25
FARP1-240ENST00000602263 SPEF2Q9C093 1822 aa13.49□□□□□ -0.25
FARP1-240ENST00000602263 PSMD14O00487 310 aa13.49□□□□□ -0.25
FARP1-240ENST00000602263 ECE2O60344 883 aa13.49□□□□□ -0.25
FARP1-240ENST00000602263 RPS12P25398 132 aaKnown RBP13.49□□□□□ -0.25
FARP1-240ENST00000602263 CCDC152Q4G0S7 254 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms