RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 AKT1S1Q96B36 256 aa22.14■■□□□ 1.13
VRK3-225ENST00000601912 FBXO3Q9UK99 471 aa22.14■■□□□ 1.13
VRK3-225ENST00000601912 ANKRD18BA2A2Z9 1011 aa22.13■■□□□ 1.13
VRK3-225ENST00000601912 MYH3P11055 1940 aa22.13■■□□□ 1.13
VRK3-225ENST00000601912 C8orf34Q49A92 452 aa22.13■■□□□ 1.13
VRK3-225ENST00000601912 TPTE2Q6XPS3 522 aa22.13■■□□□ 1.13
VRK3-225ENST00000601912 NBPF5PQ86XG9 351 aaPredicted RBP22.13■■□□□ 1.13
VRK3-225ENST00000601912 FLAD1Q8NFF5 587 aa22.13■■□□□ 1.13
VRK3-225ENST00000601912 CCDC85AQ96PX6 553 aaPredicted RBP22.13■■□□□ 1.13
VRK3-225ENST00000601912 CIAO1O76071 339 aa22.12■■□□□ 1.13
VRK3-225ENST00000601912 IL15P40933 162 aaPredicted RBP22.12■■□□□ 1.13
VRK3-225ENST00000601912 TTC22Q5TAA0 569 aa22.12■■□□□ 1.13
VRK3-225ENST00000601912 GREM2Q9H772 168 aa22.12■■□□□ 1.13
VRK3-225ENST00000601912 SALL3Q9BXA9 1300 aa22.11■■□□□ 1.13
VRK3-225ENST00000601912 EYA2O00167 538 aa22.11■■□□□ 1.13
VRK3-225ENST00000601912 IFIT2P09913 472 aaKnown RBP22.11■■□□□ 1.13
VRK3-225ENST00000601912 ITGA6P23229 1130 aa22.11■■□□□ 1.13
VRK3-225ENST00000601912 ZNF827Q17R98 1081 aa22.11■■□□□ 1.13
VRK3-225ENST00000601912 CCDC152Q4G0S7 254 aa22.11■■□□□ 1.13
VRK3-225ENST00000601912 STAP2Q9UGK3 403 aa22.11■■□□□ 1.13
VRK3-225ENST00000601912 BAG6P46379 1132 aa22.11■■□□□ 1.13
VRK3-225ENST00000601912 EN1Q05925 392 aaPredicted RBP22.11■■□□□ 1.13
VRK3-225ENST00000601912 ERFEQ4G0M1 354 aa22.11■■□□□ 1.13
VRK3-225ENST00000601912 ZNF594Q96JF6 807 aaPredicted RBP22.11■■□□□ 1.13
VRK3-225ENST00000601912 CAMKK2Q96RR4 588 aa22.11■■□□□ 1.13
VRK3-225ENST00000601912 CARMIL3Q8ND23 1372 aa22.1■■□□□ 1.13
VRK3-225ENST00000601912 AOX1Q06278 1338 aa22.1■■□□□ 1.13
VRK3-225ENST00000601912 GYS1P13807 737 aa22.1■■□□□ 1.13
VRK3-225ENST00000601912 SLC10A5Q5PT55 438 aa22.1■■□□□ 1.13
VRK3-225ENST00000601912 AACSQ86V21 672 aa22.1■■□□□ 1.13
VRK3-225ENST00000601912 GPATCH3Q96I76 525 aa22.1■■□□□ 1.13
VRK3-225ENST00000601912 NPHP1O15259 732 aa22.09■■□□□ 1.13
VRK3-225ENST00000601912 NFIXQ14938 502 aa22.09■■□□□ 1.13
VRK3-225ENST00000601912 EZH2Q15910 746 aaKnown RBP22.09■■□□□ 1.13
VRK3-225ENST00000601912 TFCP2Q12800 502 aa22.08■■□□□ 1.13
VRK3-225ENST00000601912 ATG9AQ7Z3C6 839 aa22.08■■□□□ 1.13
VRK3-225ENST00000601912 COL24A1Q17RW2 1714 aa22.08■■□□□ 1.12
VRK3-225ENST00000601912 LAMB2P55268 1798 aa22.07■■□□□ 1.12
VRK3-225ENST00000601912 MSH5O43196 834 aa22.07■■□□□ 1.12
VRK3-225ENST00000601912 GSPT1P15170 499 aaKnown RBP22.07■■□□□ 1.12
VRK3-225ENST00000601912 LRRC24Q50LG9 513 aa22.07■■□□□ 1.12
VRK3-225ENST00000601912 LDHAL6AQ6ZMR3 332 aa22.07■■□□□ 1.12
VRK3-225ENST00000601912 EAF2Q96CJ1 260 aaPredicted RBP22.07■■□□□ 1.12
VRK3-225ENST00000601912 RTL9Q8NET4 1388 aa22.06■■□□□ 1.12
VRK3-225ENST00000601912 TTC41PQ6P2S7 1318 aa22.06■■□□□ 1.12
VRK3-225ENST00000601912 DDX60Q8IY21 1712 aaKnown RBP22.06■■□□□ 1.12
VRK3-225ENST00000601912 CEP126Q9P2H0 1117 aa22.06■■□□□ 1.12
VRK3-225ENST00000601912 ERC2O15083 957 aa22.05■■□□□ 1.12
VRK3-225ENST00000601912 SF3B3Q15393 1217 aaKnown RBP22.05■■□□□ 1.12
VRK3-225ENST00000601912 TNNI3KQ59H18 835 aa22.05■■□□□ 1.12
VRK3-225ENST00000601912 COL23A1Q86Y22 540 aaPredicted RBP22.05■■□□□ 1.12
VRK3-225ENST00000601912 NLRP3Q96P20 1036 aa22.05■■□□□ 1.12
VRK3-225ENST00000601912 PUS3Q9BZE2 481 aaKnown RBP22.05■■□□□ 1.12
VRK3-225ENST00000601912 GPR108Q9NPR9 543 aa22.05■■□□□ 1.12
VRK3-225ENST00000601912 CNNM1Q9NRU3 951 aa22.05■■□□□ 1.12
VRK3-225ENST00000601912 FPGT-TNNI3KV9GXZ4 949 aa22.05■■□□□ 1.12
VRK3-225ENST00000601912 TSHZ3Q63HK5 1081 aa22.04■■□□□ 1.12
VRK3-225ENST00000601912 ECHDC1Q9NTX5 307 aa22.04■■□□□ 1.12
VRK3-225ENST00000601912 STK32BQ9NY57 414 aa22.04■■□□□ 1.12
VRK3-225ENST00000601912 RBM19Q9Y4C8 960 aaKnown RBP22.04■■□□□ 1.12
VRK3-225ENST00000601912 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.04■■□□□ 1.12
VRK3-225ENST00000601912 TM4SF1P30408 202 aa22.04■■□□□ 1.12
VRK3-225ENST00000601912 CCDC125Q86Z20 511 aa22.04■■□□□ 1.12
VRK3-225ENST00000601912 NLGN1Q8N2Q7 840 aa22.04■■□□□ 1.12
VRK3-225ENST00000601912 CNBD1Q8NA66 436 aa22.04■■□□□ 1.12
VRK3-225ENST00000601912 CCDC8Q9H0W5 538 aaPredicted RBP22.04■■□□□ 1.12
VRK3-225ENST00000601912 ABCC12Q96J65 1359 aa22.03■■□□□ 1.12
VRK3-225ENST00000601912 GLRX3O76003 335 aaKnown RBP22.03■■□□□ 1.12
VRK3-225ENST00000601912 CDC5LQ99459 802 aaKnown RBP22.03■■□□□ 1.12
VRK3-225ENST00000601912 AKAP2Q9Y2D5 859 aa22.03■■□□□ 1.12
VRK3-225ENST00000601912 SDSP20132 328 aa22.02■■□□□ 1.12
VRK3-225ENST00000601912 IGHMBP2P38935 993 aaKnown RBP22.02■■□□□ 1.12
VRK3-225ENST00000601912 SLC15A2Q16348 729 aa22.02■■□□□ 1.12
VRK3-225ENST00000601912 MPHOSPH8Q99549 860 aa22.02■■□□□ 1.12
VRK3-225ENST00000601912 RIPOR2Q9Y4F9 1068 aa22.02■■□□□ 1.12
VRK3-225ENST00000601912 CDC45O75419 566 aa22.01■■□□□ 1.11
VRK3-225ENST00000601912 PI4K2BQ8TCG2 481 aa22.01■■□□□ 1.11
VRK3-225ENST00000601912 PNPLA7Q6ZV29 1317 aa22.01■■□□□ 1.11
VRK3-225ENST00000601912 SERPINB2P05120 415 aa22.01■■□□□ 1.11
VRK3-225ENST00000601912 METTL24Q5JXM2 366 aa22.01■■□□□ 1.11
VRK3-225ENST00000601912 SEC31BQ9NQW1 1179 aa22.01■■□□□ 1.11
VRK3-225ENST00000601912 TRIM6-TRIM34B2RNG4 842 aa22■■□□□ 1.11
VRK3-225ENST00000601912 ST5P78524 1137 aa22■■□□□ 1.11
VRK3-225ENST00000601912 DEFB132Q7Z7B7 95 aa22■■□□□ 1.11
VRK3-225ENST00000601912 CASC1Q6TDU7 716 aa21.99■■□□□ 1.11
VRK3-225ENST00000601912 C3orf67Q6ZVT6 689 aa21.99■■□□□ 1.11
VRK3-225ENST00000601912 NEUROD6Q96NK8 337 aa21.99■■□□□ 1.11
VRK3-225ENST00000601912 MROH5Q6ZUA9 1318 aa21.99■■□□□ 1.11
VRK3-225ENST00000601912 TUBGCP6Q96RT7 1819 aa21.98■■□□□ 1.11
VRK3-225ENST00000601912 EIF5BO60841 1220 aaKnown RBP21.98■■□□□ 1.11
VRK3-225ENST00000601912 PRR5LQ6MZQ0 368 aa21.98■■□□□ 1.11
VRK3-225ENST00000601912 TLR7Q9NYK1 1049 aaKnown RBP21.98■■□□□ 1.11
VRK3-225ENST00000601912 DBNLQ9UJU6 430 aaKnown RBP21.98■■□□□ 1.11
VRK3-225ENST00000601912 POLRMTO00411 1230 aaKnown RBP21.98■■□□□ 1.11
VRK3-225ENST00000601912 ANKRD18AQ8IVF6 992 aa21.98■■□□□ 1.11
VRK3-225ENST00000601912 CCDC24Q8N4L8 307 aa21.98■■□□□ 1.11
VRK3-225ENST00000601912 RILPL2Q969X0 211 aa21.98■■□□□ 1.11
VRK3-225ENST00000601912 UPF2Q9HAU5 1272 aaKnown RBP21.98■■□□□ 1.11
VRK3-225ENST00000601912 ANO8Q9HCE9 1232 aaPredicted RBP21.98■■□□□ 1.11
VRK3-225ENST00000601912 A0A1B0GUL7 405 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms