RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 GRAPLQ8TC17 118 aaPredicted RBP25.44■■□□□ 1.66
SSBP4-210ENST00000601444 CELF1Q92879 486 aaKnown RBP25.44■■□□□ 1.66
SSBP4-210ENST00000601444 TAF1P21675 1872 aa25.43■■□□□ 1.66
SSBP4-210ENST00000601444 HSP90B1P14625 803 aaKnown RBP25.43■■□□□ 1.66
SSBP4-210ENST00000601444 CTSWP56202 376 aa25.43■■□□□ 1.66
SSBP4-210ENST00000601444 SOGA3Q5TF21 947 aa25.43■■□□□ 1.66
SSBP4-210ENST00000601444 GRM8O00222 908 aa25.42■■□□□ 1.66
SSBP4-210ENST00000601444 BBOX1O75936 387 aa25.42■■□□□ 1.66
SSBP4-210ENST00000601444 TTLL11Q8NHH1 800 aa25.42■■□□□ 1.66
SSBP4-210ENST00000601444 CCDC152Q4G0S7 254 aa25.41■■□□□ 1.66
SSBP4-210ENST00000601444 YTHDC1Q96MU7 727 aaKnown RBP25.41■■□□□ 1.66
SSBP4-210ENST00000601444 TAOK3Q9H2K8 898 aa25.41■■□□□ 1.66
SSBP4-210ENST00000601444 C9orf78Q9NZ63 289 aaPredicted RBP25.41■■□□□ 1.66
SSBP4-210ENST00000601444 RNF181Q9P0P0 153 aa25.41■■□□□ 1.66
SSBP4-210ENST00000601444 TNNQ9UQP3 1299 aa25.41■■□□□ 1.66
SSBP4-210ENST00000601444 ATP6V0A2Q9Y487 856 aa25.41■■□□□ 1.66
SSBP4-210ENST00000601444 SNED1Q8TER0 1413 aa25.4■■□□□ 1.66
SSBP4-210ENST00000601444 FRAT1Q92837 279 aaPredicted RBP25.4■■□□□ 1.66
SSBP4-210ENST00000601444 PLA2G12BQ9BX93 195 aa25.4■■□□□ 1.66
SSBP4-210ENST00000601444 FER1L6Q2WGJ9 1857 aa25.4■■□□□ 1.66
SSBP4-210ENST00000601444 KIF16BQ96L93 1317 aa25.39■■□□□ 1.66
SSBP4-210ENST00000601444 NBPF7P0C2Y1 421 aaPredicted RBP25.39■■□□□ 1.66
SSBP4-210ENST00000601444 LMNB1P20700 586 aa25.39■■□□□ 1.66
SSBP4-210ENST00000601444 RTKN2Q8IZC4 609 aa25.39■■□□□ 1.66
SSBP4-210ENST00000601444 API5Q9BZZ5 524 aaKnown RBP25.39■■□□□ 1.66
SSBP4-210ENST00000601444 GREM2Q9H772 168 aa25.39■■□□□ 1.66
SSBP4-210ENST00000601444 FOXO4P98177 505 aa25.38■■□□□ 1.65
SSBP4-210ENST00000601444 EPHA10Q5JZY3 1008 aa25.38■■□□□ 1.65
SSBP4-210ENST00000601444 SP8Q8IXZ3 490 aa25.38■■□□□ 1.65
SSBP4-210ENST00000601444 LTBP3Q9NS15 1303 aa25.37■■□□□ 1.65
SSBP4-210ENST00000601444 SBF1O95248 1867 aa25.37■■□□□ 1.65
SSBP4-210ENST00000601444 RPS8P62241 208 aaKnown RBP25.37■■□□□ 1.65
SSBP4-210ENST00000601444 FKBP4Q02790 459 aaKnown RBP eCLIP25.37■■□□□ 1.65
SSBP4-210ENST00000601444 CC2D2BQ6DHV5 1058 aa25.37■■□□□ 1.65
SSBP4-210ENST00000601444 ARHGAP45Q92619 1136 aa25.37■■□□□ 1.65
SSBP4-210ENST00000601444 ZNF277Q9NRM2 450 aaPredicted RBP25.37■■□□□ 1.65
SSBP4-210ENST00000601444 CSF1RP07333 972 aa25.36■■□□□ 1.65
SSBP4-210ENST00000601444 TRIM27P14373 513 aa25.36■■□□□ 1.65
SSBP4-210ENST00000601444 ZNF784Q8NCA9 323 aaPredicted RBP25.36■■□□□ 1.65
SSBP4-210ENST00000601444 SUCLG2Q96I99 432 aa25.36■■□□□ 1.65
SSBP4-210ENST00000601444 USP44Q9H0E7 712 aa25.36■■□□□ 1.65
SSBP4-210ENST00000601444 UTYO14607 1347 aa25.36■■□□□ 1.65
SSBP4-210ENST00000601444 KAZALD1Q96I82 304 aa25.35■■□□□ 1.65
SSBP4-210ENST00000601444 FAM161AQ3B820 660 aa25.34■■□□□ 1.65
SSBP4-210ENST00000601444 IPO8O15397 1037 aaKnown RBP25.33■■□□□ 1.65
SSBP4-210ENST00000601444 CCT4P50991 539 aaKnown RBP25.33■■□□□ 1.65
SSBP4-210ENST00000601444 ATF7IPQ6VMQ6 1270 aa25.33■■□□□ 1.65
SSBP4-210ENST00000601444 ZNF526Q8TF50 670 aaPredicted RBP25.33■■□□□ 1.65
SSBP4-210ENST00000601444 CLUAP1Q96AJ1 413 aa25.33■■□□□ 1.65
SSBP4-210ENST00000601444 PSMD1Q99460 953 aa25.33■■□□□ 1.65
SSBP4-210ENST00000601444 TMX4Q9H1E5 349 aaPredicted RBP25.33■■□□□ 1.65
SSBP4-210ENST00000601444 ITGA6P23229 1130 aa25.32■■□□□ 1.64
SSBP4-210ENST00000601444 LMBR1LQ6UX01 489 aa25.32■■□□□ 1.64
SSBP4-210ENST00000601444 TMC4Q7Z404 712 aa25.32■■□□□ 1.64
SSBP4-210ENST00000601444 RTL9Q8NET4 1388 aa25.31■■□□□ 1.64
SSBP4-210ENST00000601444 ZKSCAN2Q63HK3 967 aa25.31■■□□□ 1.64
SSBP4-210ENST00000601444 ANKRD18AQ8IVF6 992 aa25.31■■□□□ 1.64
SSBP4-210ENST00000601444 MPNDQ8N594 471 aa25.31■■□□□ 1.64
SSBP4-210ENST00000601444 CCDC88AQ3V6T2 1871 aa25.3■■□□□ 1.64
SSBP4-210ENST00000601444 MYH3P11055 1940 aa25.3■■□□□ 1.64
SSBP4-210ENST00000601444 IARSP41252 1262 aaKnown RBP25.3■■□□□ 1.64
SSBP4-210ENST00000601444 GPSM2P81274 684 aa25.3■■□□□ 1.64
SSBP4-210ENST00000601444 GRIPAP1Q4V328 841 aa25.3■■□□□ 1.64
SSBP4-210ENST00000601444 INTS3Q68E01 1043 aaKnown RBP25.3■■□□□ 1.64
SSBP4-210ENST00000601444 DPP8Q6V1X1 898 aaPredicted RBP25.3■■□□□ 1.64
SSBP4-210ENST00000601444 CDC5LQ99459 802 aaKnown RBP25.3■■□□□ 1.64
SSBP4-210ENST00000601444 CHMP3Q9Y3E7 222 aa25.3■■□□□ 1.64
SSBP4-210ENST00000601444 BICC1Q9H694 974 aaKnown RBP25.29■■□□□ 1.64
SSBP4-210ENST00000601444 NSFL1CQ9UNZ2 370 aaKnown RBP25.29■■□□□ 1.64
SSBP4-210ENST00000601444 RTFDC1Q9BY42 306 aaPredicted RBP25.28■■□□□ 1.64
SSBP4-210ENST00000601444 LRRC37AA6NMS7 1700 aa25.27■■□□□ 1.64
SSBP4-210ENST00000601444 ANKRD44Q8N8A2 993 aa25.27■■□□□ 1.64
SSBP4-210ENST00000601444 ANKRD18BA2A2Z9 1011 aa25.26■■□□□ 1.63
SSBP4-210ENST00000601444 MEIS3Q99687 375 aa25.26■■□□□ 1.63
SSBP4-210ENST00000601444 BSDC1Q9NW68 430 aaPredicted RBP25.26■■□□□ 1.63
SSBP4-210ENST00000601444 POLLQ9UGP5 575 aa25.26■■□□□ 1.63
SSBP4-210ENST00000601444 RCAN3Q9UKA8 241 aa25.26■■□□□ 1.63
SSBP4-210ENST00000601444 COL4A5P29400 1685 aa25.26■■□□□ 1.63
SSBP4-210ENST00000601444 IFIT5Q13325 482 aaKnown RBP25.25■■□□□ 1.63
SSBP4-210ENST00000601444 AOC3Q16853 763 aa25.25■■□□□ 1.63
SSBP4-210ENST00000601444 TMEM57Q8N5G2 664 aa25.25■■□□□ 1.63
SSBP4-210ENST00000601444 ZNF594Q96JF6 807 aaPredicted RBP25.25■■□□□ 1.63
SSBP4-210ENST00000601444 MINPP1Q9UNW1 487 aa25.25■■□□□ 1.63
SSBP4-210ENST00000601444 DUOX1Q9NRD9 1551 aa25.25■■□□□ 1.63
SSBP4-210ENST00000601444 TIAM2Q8IVF5 1701 aa25.24■■□□□ 1.63
SSBP4-210ENST00000601444 WTIPA6NIX2 430 aaPredicted RBP25.24■■□□□ 1.63
SSBP4-210ENST00000601444 RLBP1P12271 317 aa25.24■■□□□ 1.63
SSBP4-210ENST00000601444 IGHMBP2P38935 993 aaKnown RBP25.24■■□□□ 1.63
SSBP4-210ENST00000601444 RABL6Q3YEC7 729 aaPredicted RBP25.24■■□□□ 1.63
SSBP4-210ENST00000601444 GPR101Q96P66 508 aaPredicted RBP25.24■■□□□ 1.63
SSBP4-210ENST00000601444 PPIP5K2O43314 1243 aa25.23■■□□□ 1.63
SSBP4-210ENST00000601444 UBTFL1P0CB47 393 aaPredicted RBP25.23■■□□□ 1.63
SSBP4-210ENST00000601444 CCDC57Q2TAC2 916 aa25.23■■□□□ 1.63
SSBP4-210ENST00000601444 LARGE2Q8N3Y3 721 aa25.23■■□□□ 1.63
SSBP4-210ENST00000601444 SUPT20HQ8NEM7 779 aa25.23■■□□□ 1.63
SSBP4-210ENST00000601444 ANKIB1Q9P2G1 1089 aa25.23■■□□□ 1.63
SSBP4-210ENST00000601444 ZC3H4Q9UPT8 1303 aaKnown RBP25.22■■□□□ 1.63
SSBP4-210ENST00000601444 C6orf229H3BNL8 230 aa25.22■■□□□ 1.63
SSBP4-210ENST00000601444 TBC1D16Q8TBP0 767 aa25.22■■□□□ 1.63
SSBP4-210ENST00000601444 MPHOSPH8Q99549 860 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms