RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 SPEF2Q9C093 1822 aa28.65■■■□□ 2.18
IRF3-227ENST00000600911 GTF2E1P29083 439 aaPredicted RBP28.65■■■□□ 2.18
IRF3-227ENST00000600911 HDAC1Q13547 482 aaPredicted RBP28.65■■■□□ 2.18
IRF3-227ENST00000600911 FAM161AQ3B820 660 aa28.65■■■□□ 2.18
IRF3-227ENST00000600911 GREM2Q9H772 168 aa28.64■■■□□ 2.18
IRF3-227ENST00000600911 PA2G4Q9UQ80 394 aaKnown RBP28.64■■■□□ 2.18
IRF3-227ENST00000600911 PARP3Q9Y6F1 533 aa28.64■■■□□ 2.18
IRF3-227ENST00000600911 COL11A2P13942 1736 aaPredicted RBP28.64■■■□□ 2.17
IRF3-227ENST00000600911 CHMP3Q9Y3E7 222 aa28.62■■■□□ 2.17
IRF3-227ENST00000600911 ZNF594Q96JF6 807 aaPredicted RBP28.61■■■□□ 2.17
IRF3-227ENST00000600911 SEC31BQ9NQW1 1179 aa28.61■■■□□ 2.17
IRF3-227ENST00000600911 RIC1Q4ADV7 1423 aa28.6■■■□□ 2.17
IRF3-227ENST00000600911 NPHP1O15259 732 aa28.6■■■□□ 2.17
IRF3-227ENST00000600911 MTFR1LQ9H019 292 aa28.6■■■□□ 2.17
IRF3-227ENST00000600911 HDAC5Q9UQL6 1122 aa28.6■■■□□ 2.17
IRF3-227ENST00000600911 PTPN12Q05209 780 aaKnown RBP28.58■■■□□ 2.17
IRF3-227ENST00000600911 SGIP1Q9BQI5 828 aa28.58■■■□□ 2.17
IRF3-227ENST00000600911 RWDD1Q9H446 243 aaPredicted RBP28.58■■■□□ 2.17
IRF3-227ENST00000600911 ST5P78524 1137 aa28.58■■■□□ 2.17
IRF3-227ENST00000600911 SF3B3Q15393 1217 aaKnown RBP28.58■■■□□ 2.17
IRF3-227ENST00000600911 EXOC6BQ9Y2D4 811 aa28.58■■■□□ 2.17
IRF3-227ENST00000600911 SKAP1Q86WV1 359 aa28.57■■■□□ 2.16
IRF3-227ENST00000600911 LRP5O75197 1615 aa28.56■■■□□ 2.16
IRF3-227ENST00000600911 ITGA6P23229 1130 aa28.56■■■□□ 2.16
IRF3-227ENST00000600911 DCTPP1Q9H773 170 aa28.56■■■□□ 2.16
IRF3-227ENST00000600911 KIF13BQ9NQT8 1826 aa28.55■■■□□ 2.16
IRF3-227ENST00000600911 SLC51AQ86UW1 340 aa28.55■■■□□ 2.16
IRF3-227ENST00000600911 NLRP3Q96P20 1036 aa28.55■■■□□ 2.16
IRF3-227ENST00000600911 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.55■■■□□ 2.16
IRF3-227ENST00000600911 PTGER2P43116 358 aa28.54■■■□□ 2.16
IRF3-227ENST00000600911 PUS3Q9BZE2 481 aaKnown RBP28.54■■■□□ 2.16
IRF3-227ENST00000600911 SIL1Q9H173 461 aa28.54■■■□□ 2.16
IRF3-227ENST00000600911 KIAA1551Q9HCM1 1747 aa28.54■■■□□ 2.16
IRF3-227ENST00000600911 C10orf71Q711Q0 1435 aa28.54■■■□□ 2.16
IRF3-227ENST00000600911 SOCS7O14512 581 aa28.54■■■□□ 2.16
IRF3-227ENST00000600911 HMMRO75330 724 aa28.54■■■□□ 2.16
IRF3-227ENST00000600911 SMC5Q8IY18 1101 aa28.54■■■□□ 2.16
IRF3-227ENST00000600911 CACNA1SQ13698 1873 aa28.53■■■□□ 2.16
IRF3-227ENST00000600911 RTL9Q8NET4 1388 aa28.53■■■□□ 2.16
IRF3-227ENST00000600911 KLRG2A4D1S0 409 aaPredicted RBP28.52■■■□□ 2.16
IRF3-227ENST00000600911 CRY2Q49AN0 593 aa28.52■■■□□ 2.16
IRF3-227ENST00000600911 CCDC152Q4G0S7 254 aa28.52■■■□□ 2.16
IRF3-227ENST00000600911 COPRSQ9NQ92 184 aa28.52■■■□□ 2.16
IRF3-227ENST00000600911 APBB1O00213 710 aa28.51■■■□□ 2.15
IRF3-227ENST00000600911 SURF6O75683 361 aaKnown RBP28.51■■■□□ 2.15
IRF3-227ENST00000600911 IFIT5Q13325 482 aaKnown RBP28.51■■■□□ 2.15
IRF3-227ENST00000600911 LRRC24Q50LG9 513 aa28.51■■■□□ 2.15
IRF3-227ENST00000600911 BRIP1Q9BX63 1249 aa28.51■■■□□ 2.15
IRF3-227ENST00000600911 A0A1B0GUL6 1792 aa28.51■■■□□ 2.15
IRF3-227ENST00000600911 CCDC57Q2TAC2 916 aa28.51■■■□□ 2.15
IRF3-227ENST00000600911 CENPQQ7L2Z9 268 aaPredicted RBP28.51■■■□□ 2.15
IRF3-227ENST00000600911 CELF1Q92879 486 aaKnown RBP28.51■■■□□ 2.15
IRF3-227ENST00000600911 NOP58Q9Y2X3 529 aaKnown RBP28.51■■■□□ 2.15
IRF3-227ENST00000600911 ANKRD18BA2A2Z9 1011 aa28.49■■■□□ 2.15
IRF3-227ENST00000600911 SMARCA5O60264 1052 aaPredicted RBP28.49■■■□□ 2.15
IRF3-227ENST00000600911 HSP90B1P14625 803 aaKnown RBP28.49■■■□□ 2.15
IRF3-227ENST00000600911 ATG9AQ7Z3C6 839 aa28.49■■■□□ 2.15
IRF3-227ENST00000600911 SASH1O94885 1247 aa28.47■■■□□ 2.15
IRF3-227ENST00000600911 DLEC1Q9Y238 1755 aa28.47■■■□□ 2.15
IRF3-227ENST00000600911 PDZRN3Q9UPQ7 1066 aa28.47■■■□□ 2.15
IRF3-227ENST00000600911 CHRNA5P30532 468 aa28.46■■■□□ 2.15
IRF3-227ENST00000600911 GCC1Q96CN9 775 aa28.46■■■□□ 2.15
IRF3-227ENST00000600911 SRGNP10124 158 aa28.44■■■□□ 2.14
IRF3-227ENST00000600911 POLD1P28340 1107 aa28.44■■■□□ 2.14
IRF3-227ENST00000600911 EYA2O00167 538 aa28.43■■■□□ 2.14
IRF3-227ENST00000600911 TAF7LQ5H9L4 462 aa28.43■■■□□ 2.14
IRF3-227ENST00000600911 ANKRD45Q5TZF3 282 aa28.43■■■□□ 2.14
IRF3-227ENST00000600911 BCL11AQ9H165 835 aa28.43■■■□□ 2.14
IRF3-227ENST00000600911 RIPOR2Q9Y4F9 1068 aa28.43■■■□□ 2.14
IRF3-227ENST00000600911 PDE6BP35913 854 aa28.42■■■□□ 2.14
IRF3-227ENST00000600911 NUCB1Q02818 461 aa28.42■■■□□ 2.14
IRF3-227ENST00000600911 C2CD5Q86YS7 1000 aa28.42■■■□□ 2.14
IRF3-227ENST00000600911 RHPN1Q8TCX5 695 aa28.42■■■□□ 2.14
IRF3-227ENST00000600911 RPGRQ92834 1020 aaKnown RBP28.42■■■□□ 2.14
IRF3-227ENST00000600911 IL1RAPL2Q9NP60 686 aa28.42■■■□□ 2.14
IRF3-227ENST00000600911 SLX4Q8IY92 1834 aa28.42■■■□□ 2.14
IRF3-227ENST00000600911 HOXA10P31260 410 aaPredicted RBP28.41■■■□□ 2.14
IRF3-227ENST00000600911 G3BP1Q13283 466 aaKnown RBP eCLIP28.41■■■□□ 2.14
IRF3-227ENST00000600911 LDHAL6AQ6ZMR3 332 aa28.41■■■□□ 2.14
IRF3-227ENST00000600911 DDX46Q7L014 1031 aaKnown RBP28.41■■■□□ 2.14
IRF3-227ENST00000600911 PDE4AP27815 886 aa28.4■■■□□ 2.14
IRF3-227ENST00000600911 C16orf71Q8IYS4 520 aaPredicted RBP28.4■■■□□ 2.14
IRF3-227ENST00000600911 LNPKQ9C0E8 428 aa28.4■■■□□ 2.14
IRF3-227ENST00000600911 TFCP2Q12800 502 aa28.4■■■□□ 2.14
IRF3-227ENST00000600911 OS9Q13438 667 aaPredicted RBP28.4■■■□□ 2.14
IRF3-227ENST00000600911 GRAPQ13588 217 aa28.4■■■□□ 2.14
IRF3-227ENST00000600911 GRAPLQ8TC17 118 aaPredicted RBP28.4■■■□□ 2.14
IRF3-227ENST00000600911 CDC5LQ99459 802 aaKnown RBP28.4■■■□□ 2.14
IRF3-227ENST00000600911 BRCA1P38398 1863 aaKnown RBP28.39■■■□□ 2.14
IRF3-227ENST00000600911 LRRC37AA6NMS7 1700 aa28.39■■■□□ 2.13
IRF3-227ENST00000600911 CIAO1O76071 339 aa28.39■■■□□ 2.13
IRF3-227ENST00000600911 RPS8P62241 208 aaKnown RBP28.39■■■□□ 2.13
IRF3-227ENST00000600911 ANKRD18AQ8IVF6 992 aa28.39■■■□□ 2.13
IRF3-227ENST00000600911 OTUD7AQ8TE49 926 aaPredicted RBP28.39■■■□□ 2.13
IRF3-227ENST00000600911 SPON1Q9HCB6 807 aa28.39■■■□□ 2.13
IRF3-227ENST00000600911 GOLGB1Q14789 3259 aaKnown RBP28.39■■■□□ 2.13
IRF3-227ENST00000600911 CHD1LQ86WJ1 897 aa28.38■■■□□ 2.13
IRF3-227ENST00000600911 RBM17Q96I25 401 aaKnown RBP28.38■■■□□ 2.13
IRF3-227ENST00000600911 CNNM1Q9NRU3 951 aa28.38■■■□□ 2.13
IRF3-227ENST00000600911 WTIPA6NIX2 430 aaPredicted RBP28.37■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms