RNA–Protein interactions for RNA: ENST00000599642.1

KHSRP-211, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 2

Gene KHSRP, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-211ENST00000599642 TNRC6CQ9HCJ0 1690 aaKnown RBP23.16■■□□□ 1.3
KHSRP-211ENST00000599642 POLA2Q14181 598 aa23.14■■□□□ 1.29
KHSRP-211ENST00000599642 RTL5Q5HYW3 569 aaPredicted RBP23.14■■□□□ 1.29
KHSRP-211ENST00000599642 LMBR1LQ6UX01 489 aa23.14■■□□□ 1.29
KHSRP-211ENST00000599642 SYNE4Q8N205 404 aa23.14■■□□□ 1.29
KHSRP-211ENST00000599642 RWDD1Q9H446 243 aaPredicted RBP23.14■■□□□ 1.29
KHSRP-211ENST00000599642 HCLS1P14317 486 aaPredicted RBP23.13■■□□□ 1.29
KHSRP-211ENST00000599642 PTGER2P43116 358 aa23.13■■□□□ 1.29
KHSRP-211ENST00000599642 CCDC57Q2TAC2 916 aa23.13■■□□□ 1.29
KHSRP-211ENST00000599642 EPHA10Q5JZY3 1008 aa23.13■■□□□ 1.29
KHSRP-211ENST00000599642 PPP4R2Q9NY27 417 aa23.13■■□□□ 1.29
KHSRP-211ENST00000599642 ATF5Q9Y2D1 282 aaPredicted RBP23.13■■□□□ 1.29
KHSRP-211ENST00000599642 CD2APQ9Y5K6 639 aa23.13■■□□□ 1.29
KHSRP-211ENST00000599642 SRGAP3O43295 1099 aa23.12■■□□□ 1.29
KHSRP-211ENST00000599642 HOXA10P31260 410 aaPredicted RBP23.12■■□□□ 1.29
KHSRP-211ENST00000599642 TGFB2P61812 414 aa23.12■■□□□ 1.29
KHSRP-211ENST00000599642 IFIT5Q13325 482 aaKnown RBP23.12■■□□□ 1.29
KHSRP-211ENST00000599642 HSP90AB4PQ58FF6 505 aa23.12■■□□□ 1.29
KHSRP-211ENST00000599642 JARID2Q92833 1246 aaPredicted RBP23.12■■□□□ 1.29
KHSRP-211ENST00000599642 PCDHB15Q9Y5E8 787 aa23.12■■□□□ 1.29
KHSRP-211ENST00000599642 ANKRD18BA2A2Z9 1011 aa23.11■■□□□ 1.29
KHSRP-211ENST00000599642 TMC4Q7Z404 712 aa23.11■■□□□ 1.29
KHSRP-211ENST00000599642 CDC5LQ99459 802 aaKnown RBP23.11■■□□□ 1.29
KHSRP-211ENST00000599642 C1orf115Q9H7X2 142 aa23.11■■□□□ 1.29
KHSRP-211ENST00000599642 COPRSQ9NQ92 184 aa23.11■■□□□ 1.29
KHSRP-211ENST00000599642 ALDH1B1P30837 517 aa23.1■■□□□ 1.29
KHSRP-211ENST00000599642 RBM17Q96I25 401 aaKnown RBP23.1■■□□□ 1.29
KHSRP-211ENST00000599642 CRAMP1Q96RY5 1269 aa23.1■■□□□ 1.29
KHSRP-211ENST00000599642 LRP5O75197 1615 aa23.1■■□□□ 1.29
KHSRP-211ENST00000599642 NPR1P16066 1061 aa23.09■■□□□ 1.29
KHSRP-211ENST00000599642 DDX46Q7L014 1031 aaKnown RBP23.09■■□□□ 1.29
KHSRP-211ENST00000599642 RPGRQ92834 1020 aaKnown RBP23.09■■□□□ 1.29
KHSRP-211ENST00000599642 GCC1Q96CN9 775 aa23.09■■□□□ 1.29
KHSRP-211ENST00000599642 MASTLQ96GX5 879 aa23.09■■□□□ 1.29
KHSRP-211ENST00000599642 NOP58Q9Y2X3 529 aaKnown RBP23.09■■□□□ 1.29
KHSRP-211ENST00000599642 COL11A2P13942 1736 aaPredicted RBP23.08■■□□□ 1.29
KHSRP-211ENST00000599642 H0YIN7 160 aa23.08■■□□□ 1.29
KHSRP-211ENST00000599642 SRGNP10124 158 aa23.08■■□□□ 1.29
KHSRP-211ENST00000599642 ITGA6P23229 1130 aa23.08■■□□□ 1.29
KHSRP-211ENST00000599642 STYK1Q6J9G0 422 aa23.08■■□□□ 1.29
KHSRP-211ENST00000599642 SIRT2Q8IXJ6 389 aa23.08■■□□□ 1.29
KHSRP-211ENST00000599642 GREM2Q9H772 168 aa23.08■■□□□ 1.29
KHSRP-211ENST00000599642 KIAA1551Q9HCM1 1747 aa23.08■■□□□ 1.28
KHSRP-211ENST00000599642 PNMA6EA0A0J9YXQ4 647 aa23.07■■□□□ 1.28
KHSRP-211ENST00000599642 CIAO1O76071 339 aa23.07■■□□□ 1.28
KHSRP-211ENST00000599642 RFX5P48382 616 aaPredicted RBP23.07■■□□□ 1.28
KHSRP-211ENST00000599642 BRCA1P38398 1863 aaKnown RBP23.07■■□□□ 1.28
KHSRP-211ENST00000599642 BBOX1O75936 387 aa23.06■■□□□ 1.28
KHSRP-211ENST00000599642 FAM161AQ3B820 660 aa23.06■■□□□ 1.28
KHSRP-211ENST00000599642 DCTPP1Q9H773 170 aa23.06■■□□□ 1.28
KHSRP-211ENST00000599642 CHMP3Q9Y3E7 222 aa23.06■■□□□ 1.28
KHSRP-211ENST00000599642 RAB11FIP3O75154 756 aa23.05■■□□□ 1.28
KHSRP-211ENST00000599642 IGHMBP2P38935 993 aaKnown RBP23.05■■□□□ 1.28
KHSRP-211ENST00000599642 PTPN12Q05209 780 aaKnown RBP23.05■■□□□ 1.28
KHSRP-211ENST00000599642 GRAPQ13588 217 aa23.05■■□□□ 1.28
KHSRP-211ENST00000599642 ERC1Q8IUD2 1116 aa23.05■■□□□ 1.28
KHSRP-211ENST00000599642 GRAPLQ8TC17 118 aaPredicted RBP23.05■■□□□ 1.28
KHSRP-211ENST00000599642 CNKSR1Q969H4 720 aa23.05■■□□□ 1.28
KHSRP-211ENST00000599642 CCDC136Q96JN2 1154 aa23.05■■□□□ 1.28
KHSRP-211ENST00000599642 TAF7LQ5H9L4 462 aa23.04■■□□□ 1.28
KHSRP-211ENST00000599642 ANKRD18AQ8IVF6 992 aa23.04■■□□□ 1.28
KHSRP-211ENST00000599642 SPEF2Q9C093 1822 aa23.03■■□□□ 1.28
KHSRP-211ENST00000599642 RPS8P62241 208 aaKnown RBP23.03■■□□□ 1.28
KHSRP-211ENST00000599642 C3orf67Q6ZVT6 689 aa23.03■■□□□ 1.28
KHSRP-211ENST00000599642 BSDC1Q9NW68 430 aaPredicted RBP23.03■■□□□ 1.28
KHSRP-211ENST00000599642 LRRC37AA6NMS7 1700 aa23.02■■□□□ 1.28
KHSRP-211ENST00000599642 GRIPAP1Q4V328 841 aa23.02■■□□□ 1.28
KHSRP-211ENST00000599642 CENPQQ7L2Z9 268 aaPredicted RBP23.02■■□□□ 1.28
KHSRP-211ENST00000599642 C2CD5Q86YS7 1000 aa23.02■■□□□ 1.28
KHSRP-211ENST00000599642 SMC5Q8IY18 1101 aa23.02■■□□□ 1.28
KHSRP-211ENST00000599642 MPHOSPH8Q99549 860 aa23.02■■□□□ 1.28
KHSRP-211ENST00000599642 TAF1P21675 1872 aa23.02■■□□□ 1.28
KHSRP-211ENST00000599642 EYA2O00167 538 aa23.01■■□□□ 1.27
KHSRP-211ENST00000599642 IL15P40933 162 aaPredicted RBP23.01■■□□□ 1.27
KHSRP-211ENST00000599642 G3BP1Q13283 466 aaKnown RBP eCLIP23.01■■□□□ 1.274e-8■□□□□ 9.7
KHSRP-211ENST00000599642 CCDC24Q8N4L8 307 aa23.01■■□□□ 1.27
KHSRP-211ENST00000599642 MROH5Q6ZUA9 1318 aa23.01■■□□□ 1.27
KHSRP-211ENST00000599642 A0A1B0GUL6 1792 aa23.01■■□□□ 1.27
KHSRP-211ENST00000599642 SURF6O75683 361 aaKnown RBP23■■□□□ 1.27
KHSRP-211ENST00000599642 LDHAL6AQ6ZMR3 332 aa23■■□□□ 1.27
KHSRP-211ENST00000599642 CACNA1SQ13698 1873 aa23■■□□□ 1.27
KHSRP-211ENST00000599642 CC2D2BQ6DHV5 1058 aa22.99■■□□□ 1.27
KHSRP-211ENST00000599642 KIF1BPQ96EK5 621 aa22.98■■□□□ 1.27
KHSRP-211ENST00000599642 SEC31BQ9NQW1 1179 aa22.98■■□□□ 1.27
KHSRP-211ENST00000599642 RIPOR2Q9Y4F9 1068 aa22.98■■□□□ 1.27
KHSRP-211ENST00000599642 GTF3C3Q9Y5Q9 886 aa22.98■■□□□ 1.27
KHSRP-211ENST00000599642 KDM2BQ8NHM5 1336 aa22.98■■□□□ 1.27
KHSRP-211ENST00000599642 ARFGEF1Q9Y6D6 1849 aa22.98■■□□□ 1.27
KHSRP-211ENST00000599642 SP8Q8IXZ3 490 aa22.97■■□□□ 1.27
KHSRP-211ENST00000599642 ANKRD2Q9GZV1 360 aa22.97■■□□□ 1.27
KHSRP-211ENST00000599642 TMX4Q9H1E5 349 aaPredicted RBP22.97■■□□□ 1.27
KHSRP-211ENST00000599642 GPR108Q9NPR9 543 aa22.97■■□□□ 1.27
KHSRP-211ENST00000599642 CNNM1Q9NRU3 951 aa22.97■■□□□ 1.27
KHSRP-211ENST00000599642 IGHDP01880 384 aa22.96■■□□□ 1.27
KHSRP-211ENST00000599642 SOGA3Q5TF21 947 aa22.96■■□□□ 1.27
KHSRP-211ENST00000599642 TTLL6Q8N841 843 aa22.96■■□□□ 1.27
KHSRP-211ENST00000599642 CELF1Q92879 486 aaKnown RBP22.96■■□□□ 1.27
KHSRP-211ENST00000599642 CCDC85AQ96PX6 553 aaPredicted RBP22.96■■□□□ 1.27
KHSRP-211ENST00000599642 PIM2Q9P1W9 311 aa22.96■■□□□ 1.27
KHSRP-211ENST00000599642 KCNA3P22001 575 aa22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms