RNA–Protein interactions for RNA: ENST00000596482.5

HOMER3-209, Transcript of homer scaffold protein 3, humanhuman

TSL 5

Gene HOMER3, Length 866 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-209ENST00000596482 CWF19L2Q2TBE0 894 aaKnown RBP24.46■■□□□ 1.51
HOMER3-209ENST00000596482 TMC4Q7Z404 712 aa24.46■■□□□ 1.51
HOMER3-209ENST00000596482 DPY19L2Q6NUT2 758 aa24.45■■□□□ 1.5
HOMER3-209ENST00000596482 PDE8AO60658 829 aa24.44■■□□□ 1.5
HOMER3-209ENST00000596482 C16orf71Q8IYS4 520 aaPredicted RBP24.44■■□□□ 1.5
HOMER3-209ENST00000596482 CCDC152Q4G0S7 254 aa24.43■■□□□ 1.5
HOMER3-209ENST00000596482 LINS1Q8NG48 757 aa24.43■■□□□ 1.5
HOMER3-209ENST00000596482 JARID2Q92833 1246 aaPredicted RBP24.43■■□□□ 1.5
HOMER3-209ENST00000596482 LRRC37AA6NMS7 1700 aa24.42■■□□□ 1.5
HOMER3-209ENST00000596482 SLC51AQ86UW1 340 aa24.42■■□□□ 1.5
HOMER3-209ENST00000596482 SP8Q8IXZ3 490 aa24.42■■□□□ 1.5
HOMER3-209ENST00000596482 CDCA7LQ96GN5 454 aa24.42■■□□□ 1.5
HOMER3-209ENST00000596482 DPP8Q6V1X1 898 aaPredicted RBP24.41■■□□□ 1.5
HOMER3-209ENST00000596482 UBE3BQ7Z3V4 1068 aa24.41■■□□□ 1.5
HOMER3-209ENST00000596482 SUPT20HQ8NEM7 779 aa24.41■■□□□ 1.5
HOMER3-209ENST00000596482 F6X3S4 739 aa24.4■■□□□ 1.5
HOMER3-209ENST00000596482 CTSWP56202 376 aa24.4■■□□□ 1.5
HOMER3-209ENST00000596482 GCKRQ14397 625 aa24.4■■□□□ 1.5
HOMER3-209ENST00000596482 JDP2Q8WYK2 163 aa24.4■■□□□ 1.5
HOMER3-209ENST00000596482 CELF1Q92879 486 aaKnown RBP24.4■■□□□ 1.5
HOMER3-209ENST00000596482 RRAGCQ9HB90 399 aa24.4■■□□□ 1.5
HOMER3-209ENST00000596482 WDR90Q96KV7 1748 aa24.4■■□□□ 1.5
HOMER3-209ENST00000596482 LARGE2Q8N3Y3 721 aa24.39■■□□□ 1.49
HOMER3-209ENST00000596482 MPNDQ8N594 471 aa24.39■■□□□ 1.49
HOMER3-209ENST00000596482 TAF1P21675 1872 aa24.38■■□□□ 1.49
HOMER3-209ENST00000596482 PPIP5K2O43314 1243 aa24.38■■□□□ 1.49
HOMER3-209ENST00000596482 TOMM70O94826 608 aa24.38■■□□□ 1.49
HOMER3-209ENST00000596482 CCDC85AQ96PX6 553 aaPredicted RBP24.38■■□□□ 1.49
HOMER3-209ENST00000596482 MYH3P11055 1940 aa24.37■■□□□ 1.49
HOMER3-209ENST00000596482 COL4A1P02462 1669 aa24.37■■□□□ 1.49
HOMER3-209ENST00000596482 ZNF541Q9H0D2 1346 aa24.36■■□□□ 1.49
HOMER3-209ENST00000596482 H7C1W4 665 aa24.36■■□□□ 1.49
HOMER3-209ENST00000596482 VEGFAP15692 232 aaPredicted RBP24.36■■□□□ 1.49
HOMER3-209ENST00000596482 RPS8P62241 208 aaKnown RBP24.36■■□□□ 1.49
HOMER3-209ENST00000596482 NIM1KQ8IY84 436 aa24.36■■□□□ 1.49
HOMER3-209ENST00000596482 TRMT2AQ8IZ69 625 aaKnown RBP24.36■■□□□ 1.49
HOMER3-209ENST00000596482 RTFDC1Q9BY42 306 aaPredicted RBP24.36■■□□□ 1.49
HOMER3-209ENST00000596482 CT47B1P0C2W7 299 aaPredicted RBP24.35■■□□□ 1.49
HOMER3-209ENST00000596482 BEND3Q5T5X7 828 aa24.35■■□□□ 1.49
HOMER3-209ENST00000596482 SLC4A10Q6U841 1118 aa24.35■■□□□ 1.49
HOMER3-209ENST00000596482 MRPL50Q8N5N7 158 aaKnown RBP24.35■■□□□ 1.49
HOMER3-209ENST00000596482 SSH1Q8WYL5 1049 aa24.35■■□□□ 1.49
HOMER3-209ENST00000596482 VPS33BQ9H267 617 aa24.35■■□□□ 1.49
HOMER3-209ENST00000596482 SEC31BQ9NQW1 1179 aa24.35■■□□□ 1.49
HOMER3-209ENST00000596482 PTPRCP08575 1304 aa24.35■■□□□ 1.49
HOMER3-209ENST00000596482 COL4A5P29400 1685 aa24.34■■□□□ 1.49
HOMER3-209ENST00000596482 DUOX1Q9NRD9 1551 aa24.34■■□□□ 1.49
HOMER3-209ENST00000596482 FZD9O00144 591 aa24.34■■□□□ 1.49
HOMER3-209ENST00000596482 DDNO94850 711 aaPredicted RBP24.34■■□□□ 1.49
HOMER3-209ENST00000596482 EIF6P56537 245 aaKnown RBP24.34■■□□□ 1.49
HOMER3-209ENST00000596482 HNRNPUQ00839 825 aaKnown RBP eCLIP24.34■■□□□ 1.49
HOMER3-209ENST00000596482 AOC3Q16853 763 aa24.34■■□□□ 1.49
HOMER3-209ENST00000596482 ALDH1L2Q3SY69 923 aa24.34■■□□□ 1.49
HOMER3-209ENST00000596482 ANKRD18AQ8IVF6 992 aa24.34■■□□□ 1.49
HOMER3-209ENST00000596482 RBM46Q8TBY0 533 aaKnown RBP24.34■■□□□ 1.49
HOMER3-209ENST00000596482 CDC5LQ99459 802 aaKnown RBP24.34■■□□□ 1.49
HOMER3-209ENST00000596482 BCL2L13Q9BXK5 485 aa24.34■■□□□ 1.49
HOMER3-209ENST00000596482 SMC4Q9NTJ3 1288 aa24.34■■□□□ 1.49
HOMER3-209ENST00000596482 RTL9Q8NET4 1388 aa24.33■■□□□ 1.49
HOMER3-209ENST00000596482 TTLL11Q8NHH1 800 aa24.33■■□□□ 1.49
HOMER3-209ENST00000596482 PLA2G12BQ9BX93 195 aa24.33■■□□□ 1.49
HOMER3-209ENST00000596482 ALDH1L1O75891 902 aa24.32■■□□□ 1.48
HOMER3-209ENST00000596482 SRCIN1Q9C0H9 1055 aa24.32■■□□□ 1.48
HOMER3-209ENST00000596482 NSFL1CQ9UNZ2 370 aaKnown RBP24.32■■□□□ 1.48
HOMER3-209ENST00000596482 IQCA1LA6NCM1 817 aa24.31■■□□□ 1.48
HOMER3-209ENST00000596482 CASP7P55210 303 aa24.31■■□□□ 1.48
HOMER3-209ENST00000596482 L3MBTL3Q96JM7 780 aaPredicted RBP24.31■■□□□ 1.48
HOMER3-209ENST00000596482 GREM2Q9H772 168 aa24.31■■□□□ 1.48
HOMER3-209ENST00000596482 GPSM2P81274 684 aa24.3■■□□□ 1.48
HOMER3-209ENST00000596482 KIAA2012Q0VF49 1180 aa24.3■■□□□ 1.48
HOMER3-209ENST00000596482 GPC2Q8N158 579 aa24.3■■□□□ 1.48
HOMER3-209ENST00000596482 LTBP1Q14766 1721 aa24.3■■□□□ 1.48
HOMER3-209ENST00000596482 GRM8O00222 908 aa24.29■■□□□ 1.48
HOMER3-209ENST00000596482 C9orf78Q9NZ63 289 aaPredicted RBP24.29■■□□□ 1.48
HOMER3-209ENST00000596482 C6orf229H3BNL8 230 aa24.28■■□□□ 1.48
HOMER3-209ENST00000596482 EYA3Q99504 573 aa24.28■■□□□ 1.48
HOMER3-209ENST00000596482 ANKIB1Q9P2G1 1089 aa24.28■■□□□ 1.48
HOMER3-209ENST00000596482 SCN4AP35499 1836 aa24.27■■□□□ 1.48
HOMER3-209ENST00000596482 SPEF2Q9C093 1822 aa24.27■■□□□ 1.48
HOMER3-209ENST00000596482 POTECB2RU33 542 aa24.27■■□□□ 1.48
HOMER3-209ENST00000596482 IGHMBP2P38935 993 aaKnown RBP24.27■■□□□ 1.48
HOMER3-209ENST00000596482 FSTL1Q12841 308 aa24.27■■□□□ 1.48
HOMER3-209ENST00000596482 FAM161AQ3B820 660 aa24.27■■□□□ 1.48
HOMER3-209ENST00000596482 SMC1BQ8NDV3 1235 aa24.27■■□□□ 1.48
HOMER3-209ENST00000596482 ZNRF3Q9ULT6 936 aa24.27■■□□□ 1.48
HOMER3-209ENST00000596482 GJA3Q9Y6H8 435 aa24.27■■□□□ 1.48
HOMER3-209ENST00000596482 UFL1O94874 794 aa24.26■■□□□ 1.47
HOMER3-209ENST00000596482 ITGA6P23229 1130 aa24.26■■□□□ 1.47
HOMER3-209ENST00000596482 WASHC4Q2M389 1173 aa24.26■■□□□ 1.47
HOMER3-209ENST00000596482 PODXL2Q9NZ53 605 aa24.26■■□□□ 1.47
HOMER3-209ENST00000596482 GGA1Q9UJY5 639 aa24.26■■□□□ 1.47
HOMER3-209ENST00000596482 HSPA6P17066 643 aa24.25■■□□□ 1.47
HOMER3-209ENST00000596482 TBC1D16Q8TBP0 767 aa24.25■■□□□ 1.47
HOMER3-209ENST00000596482 HACL1Q9UJ83 578 aa24.25■■□□□ 1.47
HOMER3-209ENST00000596482 CHMP3Q9Y3E7 222 aa24.25■■□□□ 1.47
HOMER3-209ENST00000596482 XDHP47989 1333 aa24.25■■□□□ 1.47
HOMER3-209ENST00000596482 BSDC1Q9NW68 430 aaPredicted RBP24.24■■□□□ 1.47
HOMER3-209ENST00000596482 POLLQ9UGP5 575 aa24.24■■□□□ 1.47
HOMER3-209ENST00000596482 ANKRD18BA2A2Z9 1011 aa24.23■■□□□ 1.47
HOMER3-209ENST00000596482 CSF1RP07333 972 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms