RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 LMBR1LQ6UX01 489 aa13.32□□□□□ -0.28
SMAD4-214ENST00000592186 KAZALD1Q96I82 304 aa13.32□□□□□ -0.28
SMAD4-214ENST00000592186 BICC1Q9H694 974 aaKnown RBP13.32□□□□□ -0.28
SMAD4-214ENST00000592186 N4BP2Q86UW6 1770 aaPredicted RBP13.31□□□□□ -0.28
SMAD4-214ENST00000592186 TGFB2P61812 414 aa13.31□□□□□ -0.28
SMAD4-214ENST00000592186 C1QBPQ07021 282 aaKnown RBP13.31□□□□□ -0.28
SMAD4-214ENST00000592186 CCDC57Q2TAC2 916 aa13.31□□□□□ -0.28
SMAD4-214ENST00000592186 CRY2Q49AN0 593 aa13.31□□□□□ -0.28
SMAD4-214ENST00000592186 RPGRQ92834 1020 aaKnown RBP13.31□□□□□ -0.28
SMAD4-214ENST00000592186 COL24A1Q17RW2 1714 aa13.31□□□□□ -0.28
SMAD4-214ENST00000592186 RTL9Q8NET4 1388 aa13.3□□□□□ -0.28
SMAD4-214ENST00000592186 HOXA10P31260 410 aaPredicted RBP13.3□□□□□ -0.28
SMAD4-214ENST00000592186 IFIT5Q13325 482 aaKnown RBP13.3□□□□□ -0.28
SMAD4-214ENST00000592186 EPHA10Q5JZY3 1008 aa13.3□□□□□ -0.28
SMAD4-214ENST00000592186 DDX46Q7L014 1031 aaKnown RBP13.3□□□□□ -0.28
SMAD4-214ENST00000592186 CCDC24Q8N4L8 307 aa13.3□□□□□ -0.28
SMAD4-214ENST00000592186 ANKRD44Q8N8A2 993 aa13.3□□□□□ -0.28
SMAD4-214ENST00000592186 RBM17Q96I25 401 aaKnown RBP13.3□□□□□ -0.28
SMAD4-214ENST00000592186 AFDNP55196 1824 aaKnown RBP13.3□□□□□ -0.28
SMAD4-214ENST00000592186 ANKRD18BA2A2Z9 1011 aa13.29□□□□□ -0.28
SMAD4-214ENST00000592186 SRGAP3O43295 1099 aa13.29□□□□□ -0.28
SMAD4-214ENST00000592186 SRGNP10124 158 aa13.29□□□□□ -0.28
SMAD4-214ENST00000592186 NPR1P16066 1061 aa13.29□□□□□ -0.28
SMAD4-214ENST00000592186 ALDH1B1P30837 517 aa13.29□□□□□ -0.28
SMAD4-214ENST00000592186 CEP85Q6P2H3 762 aa13.29□□□□□ -0.28
SMAD4-214ENST00000592186 MASTLQ96GX5 879 aa13.29□□□□□ -0.28
SMAD4-214ENST00000592186 CRAMP1Q96RY5 1269 aa13.29□□□□□ -0.28
SMAD4-214ENST00000592186 CDC5LQ99459 802 aaKnown RBP13.29□□□□□ -0.28
SMAD4-214ENST00000592186 C1orf115Q9H7X2 142 aa13.29□□□□□ -0.28
SMAD4-214ENST00000592186 CHMP3Q9Y3E7 222 aa13.29□□□□□ -0.28
SMAD4-214ENST00000592186 ABCC12Q96J65 1359 aa13.29□□□□□ -0.28
SMAD4-214ENST00000592186 BBOX1O75936 387 aa13.28□□□□□ -0.28
SMAD4-214ENST00000592186 CACNB1Q02641 598 aaPredicted RBP13.28□□□□□ -0.28
SMAD4-214ENST00000592186 STYK1Q6J9G0 422 aa13.28□□□□□ -0.28
SMAD4-214ENST00000592186 C2CD5Q86YS7 1000 aa13.28□□□□□ -0.28
SMAD4-214ENST00000592186 SSH3Q8TE77 659 aa13.28□□□□□ -0.28
SMAD4-214ENST00000592186 RWDD1Q9H446 243 aaPredicted RBP13.28□□□□□ -0.28
SMAD4-214ENST00000592186 GREM2Q9H772 168 aa13.28□□□□□ -0.28
SMAD4-214ENST00000592186 PPP1R1BQ9UD71 204 aaPredicted RBP13.28□□□□□ -0.28
SMAD4-214ENST00000592186 FBXO3Q9UK99 471 aa13.28□□□□□ -0.28
SMAD4-214ENST00000592186 NRXN2Q9P2S2 1712 aa13.28□□□□□ -0.28
SMAD4-214ENST00000592186 ITGA6P23229 1130 aa13.27□□□□□ -0.29
SMAD4-214ENST00000592186 HDAC1Q13547 482 aaPredicted RBP13.27□□□□□ -0.29
SMAD4-214ENST00000592186 TAF7LQ5H9L4 462 aa13.27□□□□□ -0.29
SMAD4-214ENST00000592186 TMC4Q7Z404 712 aa13.27□□□□□ -0.29
SMAD4-214ENST00000592186 CNKSR1Q969H4 720 aa13.27□□□□□ -0.29
SMAD4-214ENST00000592186 PCDHB15Q9Y5E8 787 aa13.27□□□□□ -0.29
SMAD4-214ENST00000592186 C10orf71Q711Q0 1435 aa13.27□□□□□ -0.29
SMAD4-214ENST00000592186 IGHMBP2P38935 993 aaKnown RBP13.26□□□□□ -0.29
SMAD4-214ENST00000592186 RPS8P62241 208 aaKnown RBP13.26□□□□□ -0.29
SMAD4-214ENST00000592186 POLA2Q14181 598 aa13.26□□□□□ -0.29
SMAD4-214ENST00000592186 FAM161AQ3B820 660 aa13.26□□□□□ -0.29
SMAD4-214ENST00000592186 HSP90AB4PQ58FF6 505 aa13.26□□□□□ -0.29
SMAD4-214ENST00000592186 C3orf67Q6ZVT6 689 aa13.26□□□□□ -0.29
SMAD4-214ENST00000592186 ANKRD18AQ8IVF6 992 aa13.26□□□□□ -0.29
SMAD4-214ENST00000592186 COPRSQ9NQ92 184 aa13.26□□□□□ -0.29
SMAD4-214ENST00000592186 PNMA6EA0A0J9YXQ4 647 aa13.25□□□□□ -0.29
SMAD4-214ENST00000592186 GRAPQ13588 217 aa13.25□□□□□ -0.29
SMAD4-214ENST00000592186 SIRT2Q8IXJ6 389 aa13.25□□□□□ -0.29
SMAD4-214ENST00000592186 GRAPLQ8TC17 118 aaPredicted RBP13.25□□□□□ -0.29
SMAD4-214ENST00000592186 ZNF622Q969S3 477 aaKnown RBP eCLIP13.25□□□□□ -0.29
SMAD4-214ENST00000592186 CCDC85AQ96PX6 553 aaPredicted RBP13.25□□□□□ -0.29
SMAD4-214ENST00000592186 MPHOSPH8Q99549 860 aa13.25□□□□□ -0.29
SMAD4-214ENST00000592186 TMX4Q9H1E5 349 aaPredicted RBP13.25□□□□□ -0.29
SMAD4-214ENST00000592186 PPP4R2Q9NY27 417 aa13.25□□□□□ -0.29
SMAD4-214ENST00000592186 CIAO1O76071 339 aa13.24□□□□□ -0.29
SMAD4-214ENST00000592186 RFX5P48382 616 aaPredicted RBP13.24□□□□□ -0.29
SMAD4-214ENST00000592186 PTPN12Q05209 780 aaKnown RBP13.24□□□□□ -0.29
SMAD4-214ENST00000592186 LDHAL6AQ6ZMR3 332 aa13.24□□□□□ -0.29
SMAD4-214ENST00000592186 BSDC1Q9NW68 430 aaPredicted RBP13.24□□□□□ -0.29
SMAD4-214ENST00000592186 PIM2Q9P1W9 311 aa13.24□□□□□ -0.29
SMAD4-214ENST00000592186 NOP58Q9Y2X3 529 aaKnown RBP13.24□□□□□ -0.29
SMAD4-214ENST00000592186 A0A0G2JLW4 131 aa13.23□□□□□ -0.29
SMAD4-214ENST00000592186 SURF6O75683 361 aaKnown RBP13.23□□□□□ -0.29
SMAD4-214ENST00000592186 DPEP1P16444 411 aa13.23□□□□□ -0.29
SMAD4-214ENST00000592186 G3BP1Q13283 466 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMAD4-214ENST00000592186 GRIPAP1Q4V328 841 aa13.23□□□□□ -0.29
SMAD4-214ENST00000592186 KLHL34Q8N239 644 aa13.23□□□□□ -0.29
SMAD4-214ENST00000592186 TTLL6Q8N841 843 aa13.23□□□□□ -0.29
SMAD4-214ENST00000592186 GCC1Q96CN9 775 aa13.23□□□□□ -0.29
SMAD4-214ENST00000592186 DCTPP1Q9H773 170 aa13.23□□□□□ -0.29
SMAD4-214ENST00000592186 SEC31BQ9NQW1 1179 aa13.23□□□□□ -0.29
SMAD4-214ENST00000592186 EYA2O00167 538 aa13.22□□□□□ -0.29
SMAD4-214ENST00000592186 RAB11FIP3O75154 756 aa13.22□□□□□ -0.29
SMAD4-214ENST00000592186 KCNA3P22001 575 aa13.22□□□□□ -0.29
SMAD4-214ENST00000592186 CHRNA5P30532 468 aa13.22□□□□□ -0.29
SMAD4-214ENST00000592186 IL15P40933 162 aaPredicted RBP13.22□□□□□ -0.29
SMAD4-214ENST00000592186 CC2D2BQ6DHV5 1058 aa13.22□□□□□ -0.29
SMAD4-214ENST00000592186 ERC1Q8IUD2 1116 aa13.22□□□□□ -0.29
SMAD4-214ENST00000592186 CCDC136Q96JN2 1154 aa13.22□□□□□ -0.29
SMAD4-214ENST00000592186 FHDC1Q9C0D6 1143 aaPredicted RBP13.22□□□□□ -0.29
SMAD4-214ENST00000592186 CNNM1Q9NRU3 951 aa13.22□□□□□ -0.29
SMAD4-214ENST00000592186 DDX60Q8IY21 1712 aaKnown RBP13.21□□□□□ -0.29
SMAD4-214ENST00000592186 MROH5Q6ZUA9 1318 aa13.21□□□□□ -0.29
SMAD4-214ENST00000592186 SP8Q8IXZ3 490 aa13.21□□□□□ -0.29
SMAD4-214ENST00000592186 CELF1Q92879 486 aaKnown RBP13.21□□□□□ -0.29
SMAD4-214ENST00000592186 SYT17Q9BSW7 474 aa13.21□□□□□ -0.29
SMAD4-214ENST00000592186 ANKRD2Q9GZV1 360 aa13.21□□□□□ -0.29
SMAD4-214ENST00000592186 LAMB2P55268 1798 aa13.21□□□□□ -0.29
SMAD4-214ENST00000592186 OS9Q13438 667 aaPredicted RBP13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms