RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 PLBD2Q8NHP8 589 aa11.63□□□□□ -0.55
VPS25-205ENST00000590339 OSBPL3Q9H4L5 887 aa11.63□□□□□ -0.55
VPS25-205ENST00000590339 ZBTB3Q9H5J0 574 aa11.63□□□□□ -0.55
VPS25-205ENST00000590339 HDAC5Q9UQL6 1122 aa11.63□□□□□ -0.55
VPS25-205ENST00000590339 EXOC6BQ9Y2D4 811 aa11.63□□□□□ -0.55
VPS25-205ENST00000590339 GOLGB1Q14789 3259 aaKnown RBP11.63□□□□□ -0.55
VPS25-205ENST00000590339 SMARCA5O60264 1052 aaPredicted RBP11.62□□□□□ -0.55
VPS25-205ENST00000590339 GPTP24298 496 aa11.62□□□□□ -0.55
VPS25-205ENST00000590339 RASSF7Q02833 373 aa11.62□□□□□ -0.55
VPS25-205ENST00000590339 AIMP1Q12904 312 aaKnown RBP11.62□□□□□ -0.55
VPS25-205ENST00000590339 KIF6Q6ZMV9 814 aa11.62□□□□□ -0.55
VPS25-205ENST00000590339 ANKRD13DQ6ZTN6 518 aa11.62□□□□□ -0.55
VPS25-205ENST00000590339 RIC3Q7Z5B4 369 aa11.62□□□□□ -0.55
VPS25-205ENST00000590339 OTUD7AQ8TE49 926 aaPredicted RBP11.62□□□□□ -0.55
VPS25-205ENST00000590339 DDRGK1Q96HY6 314 aa11.62□□□□□ -0.55
VPS25-205ENST00000590339 TBC1D32Q96NH3 1257 aa11.62□□□□□ -0.55
VPS25-205ENST00000590339 RNF181Q9P0P0 153 aa11.62□□□□□ -0.55
VPS25-205ENST00000590339 NOP58Q9Y2X3 529 aaKnown RBP11.62□□□□□ -0.55
VPS25-205ENST00000590339 AOX1Q06278 1338 aa11.61□□□□□ -0.55
VPS25-205ENST00000590339 C21orf2O43822 256 aa11.61□□□□□ -0.55
VPS25-205ENST00000590339 RAB11FIP3O75154 756 aa11.61□□□□□ -0.55
VPS25-205ENST00000590339 NEXNQ0ZGT2 675 aa11.61□□□□□ -0.55
VPS25-205ENST00000590339 GCKRQ14397 625 aa11.61□□□□□ -0.55
VPS25-205ENST00000590339 KAZALD1Q96I82 304 aa11.61□□□□□ -0.55
VPS25-205ENST00000590339 SUCLG2Q96I99 432 aa11.61□□□□□ -0.55
VPS25-205ENST00000590339 MYD88Q99836 296 aa11.61□□□□□ -0.55
VPS25-205ENST00000590339 LRRCC1Q9C099 1032 aa11.61□□□□□ -0.55
VPS25-205ENST00000590339 BCORQ6W2J9 1755 aa11.61□□□□□ -0.55
VPS25-205ENST00000590339 MAP3K15Q6ZN16 1313 aa11.6□□□□□ -0.55
VPS25-205ENST00000590339 AK9Q5TCS8 1911 aa11.6□□□□□ -0.55
VPS25-205ENST00000590339 ERVV-1B6SEH8 477 aa11.6□□□□□ -0.55
VPS25-205ENST00000590339 SRGAP3O43295 1099 aa11.6□□□□□ -0.55
VPS25-205ENST00000590339 NUTM1Q86Y26 1132 aa11.6□□□□□ -0.55
VPS25-205ENST00000590339 C16orf71Q8IYS4 520 aaPredicted RBP11.6□□□□□ -0.55
VPS25-205ENST00000590339 C9orf78Q9NZ63 289 aaPredicted RBP11.6□□□□□ -0.55
VPS25-205ENST00000590339 ZBTB47Q9UFB7 747 aaPredicted RBP11.6□□□□□ -0.55
VPS25-205ENST00000590339 STAP2Q9UGK3 403 aa11.6□□□□□ -0.55
VPS25-205ENST00000590339 CHD4Q14839 1912 aa11.6□□□□□ -0.55
VPS25-205ENST00000590339 CDC45O75419 566 aa11.59□□□□□ -0.55
VPS25-205ENST00000590339 SRGNP10124 158 aa11.59□□□□□ -0.55
VPS25-205ENST00000590339 PDE1AP54750 535 aa11.59□□□□□ -0.55
VPS25-205ENST00000590339 CASP7P55210 303 aa11.59□□□□□ -0.55
VPS25-205ENST00000590339 MASTLQ96GX5 879 aa11.59□□□□□ -0.55
VPS25-205ENST00000590339 NUP98P52948 1817 aa11.58□□□□□ -0.56
VPS25-205ENST00000590339 RABL6Q3YEC7 729 aaPredicted RBP11.58□□□□□ -0.56
VPS25-205ENST00000590339 HSP90AB4PQ58FF6 505 aa11.58□□□□□ -0.56
VPS25-205ENST00000590339 SUSD4Q5VX71 490 aa11.58□□□□□ -0.56
VPS25-205ENST00000590339 STYK1Q6J9G0 422 aa11.58□□□□□ -0.56
VPS25-205ENST00000590339 TBC1D9Q6ZT07 1266 aa11.58□□□□□ -0.56
VPS25-205ENST00000590339 CNKSR1Q969H4 720 aa11.58□□□□□ -0.56
VPS25-205ENST00000590339 KIF1BPQ96EK5 621 aa11.58□□□□□ -0.56
VPS25-205ENST00000590339 BICC1Q9H694 974 aaKnown RBP11.58□□□□□ -0.56
VPS25-205ENST00000590339 UPF2Q9HAU5 1272 aaKnown RBP11.58□□□□□ -0.56
VPS25-205ENST00000590339 NMRK2Q9NPI5 230 aa11.58□□□□□ -0.56
VPS25-205ENST00000590339 LAMB2P55268 1798 aa11.58□□□□□ -0.56
VPS25-205ENST00000590339 APBB1O00213 710 aa11.57□□□□□ -0.56
VPS25-205ENST00000590339 MX1P20591 662 aa11.57□□□□□ -0.56
VPS25-205ENST00000590339 PRELPP51888 382 aa11.57□□□□□ -0.56
VPS25-205ENST00000590339 ERFEQ4G0M1 354 aa11.57□□□□□ -0.56
VPS25-205ENST00000590339 PRPF40BQ6NWY9 871 aaKnown RBP11.57□□□□□ -0.56
VPS25-205ENST00000590339 GIGYF2Q6Y7W6 1299 aaKnown RBP11.57□□□□□ -0.56
VPS25-205ENST00000590339 RHPN1Q8TCX5 695 aa11.57□□□□□ -0.56
VPS25-205ENST00000590339 KIF13BQ9NQT8 1826 aa11.57□□□□□ -0.56
VPS25-205ENST00000590339 KIAA1551Q9HCM1 1747 aa11.57□□□□□ -0.56
VPS25-205ENST00000590339 SCN7AQ01118 1682 aa11.56□□□□□ -0.56
VPS25-205ENST00000590339 NFKBIEO00221 500 aa11.56□□□□□ -0.56
VPS25-205ENST00000590339 KIF3CO14782 793 aa11.56□□□□□ -0.56
VPS25-205ENST00000590339 RGL2O15211 777 aa11.56□□□□□ -0.56
VPS25-205ENST00000590339 SURF6O75683 361 aaKnown RBP11.56□□□□□ -0.56
VPS25-205ENST00000590339 NPR1P16066 1061 aa11.56□□□□□ -0.56
VPS25-205ENST00000590339 LMNB1P20700 586 aa11.56□□□□□ -0.56
VPS25-205ENST00000590339 RBM25P49756 843 aaKnown RBP11.56□□□□□ -0.56
VPS25-205ENST00000590339 EPHA10Q5JZY3 1008 aa11.56□□□□□ -0.56
VPS25-205ENST00000590339 ISCA1Q9BUE6 129 aa11.56□□□□□ -0.56
VPS25-205ENST00000590339 NYXQ9GZU5 481 aa11.56□□□□□ -0.56
VPS25-205ENST00000590339 RRAGCQ9HB90 399 aa11.56□□□□□ -0.56
VPS25-205ENST00000590339 MYH3P11055 1940 aa11.56□□□□□ -0.56
VPS25-205ENST00000590339 UBN2Q6ZU65 1347 aa11.56□□□□□ -0.56
VPS25-205ENST00000590339 H7C1W4 665 aa11.55□□□□□ -0.56
VPS25-205ENST00000590339 SDSP20132 328 aa11.55□□□□□ -0.56
VPS25-205ENST00000590339 RFX5P48382 616 aaPredicted RBP11.55□□□□□ -0.56
VPS25-205ENST00000590339 MFAP1P55081 439 aaKnown RBP11.55□□□□□ -0.56
VPS25-205ENST00000590339 OLFM4Q6UX06 510 aa11.55□□□□□ -0.56
VPS25-205ENST00000590339 ERC1Q8IUD2 1116 aa11.55□□□□□ -0.56
VPS25-205ENST00000590339 ZNF34Q8IZ26 560 aa11.55□□□□□ -0.56
VPS25-205ENST00000590339 KLRG2A4D1S0 409 aaPredicted RBP11.54□□□□□ -0.56
VPS25-205ENST00000590339 ATP5J2-PTCD1G3V325 749 aa11.54□□□□□ -0.56
VPS25-205ENST00000590339 EIF5BO60841 1220 aaKnown RBP11.54□□□□□ -0.56
VPS25-205ENST00000590339 TRIM28Q13263 835 aaKnown RBP11.54□□□□□ -0.56
VPS25-205ENST00000590339 UBE3BQ7Z3V4 1068 aa11.54□□□□□ -0.56
VPS25-205ENST00000590339 CCDC191Q8NCU4 936 aa11.54□□□□□ -0.56
VPS25-205ENST00000590339 C22orf23Q9BZE7 217 aa11.54□□□□□ -0.56
VPS25-205ENST00000590339 CWC25Q9NXE8 425 aaPredicted RBP11.54□□□□□ -0.56
VPS25-205ENST00000590339 ALDH1B1P30837 517 aa11.53□□□□□ -0.56
VPS25-205ENST00000590339 PARP10Q53GL7 1025 aa11.53□□□□□ -0.56
VPS25-205ENST00000590339 PI4K2BQ8TCG2 481 aa11.53□□□□□ -0.56
VPS25-205ENST00000590339 RPGRQ92834 1020 aaKnown RBP11.53□□□□□ -0.56
VPS25-205ENST00000590339 UTP14AQ9BVJ6 771 aaKnown RBP11.53□□□□□ -0.56
VPS25-205ENST00000590339 TAOK3Q9H2K8 898 aa11.53□□□□□ -0.56
VPS25-205ENST00000590339 IL1RAPL2Q9NP60 686 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms