RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-221ENST00000589867 LRRC37AA6NMS7 1700 aa22.11■■□□□ 1.13
MBD1-221ENST00000589867 ZC3H4Q9UPT8 1303 aaKnown RBP22.11■■□□□ 1.13
MBD1-221ENST00000589867 KIF3CO14782 793 aa22.11■■□□□ 1.13
MBD1-221ENST00000589867 GCKRQ14397 625 aa22.11■■□□□ 1.13
MBD1-221ENST00000589867 LINS1Q8NG48 757 aa22.11■■□□□ 1.13
MBD1-221ENST00000589867 BBOX1O75936 387 aa22.1■■□□□ 1.13
MBD1-221ENST00000589867 NEXNQ0ZGT2 675 aa22.1■■□□□ 1.13
MBD1-221ENST00000589867 CC2D2BQ6DHV5 1058 aa22.1■■□□□ 1.13
MBD1-221ENST00000589867 DDX46Q7L014 1031 aaKnown RBP22.1■■□□□ 1.13
MBD1-221ENST00000589867 PSMD1Q99460 953 aa22.1■■□□□ 1.13
MBD1-221ENST00000589867 NMRK2Q9NPI5 230 aa22.1■■□□□ 1.13
MBD1-221ENST00000589867 SEC31BQ9NQW1 1179 aa22.1■■□□□ 1.13
MBD1-221ENST00000589867 MYH3P11055 1940 aa22.1■■□□□ 1.13
MBD1-221ENST00000589867 PDE8AO60658 829 aa22.09■■□□□ 1.13
MBD1-221ENST00000589867 DUOX1Q9NRD9 1551 aa22.08■■□□□ 1.13
MBD1-221ENST00000589867 SP8Q8IXZ3 490 aa22.08■■□□□ 1.13
MBD1-221ENST00000589867 BCL2L13Q9BXK5 485 aa22.08■■□□□ 1.13
MBD1-221ENST00000589867 UBE3BQ7Z3V4 1068 aa22.07■■□□□ 1.12
MBD1-221ENST00000589867 LTBP1Q14766 1721 aa22.06■■□□□ 1.12
MBD1-221ENST00000589867 GLTPD2A6NH11 291 aa22.06■■□□□ 1.12
MBD1-221ENST00000589867 IARSP41252 1262 aaKnown RBP22.06■■□□□ 1.12
MBD1-221ENST00000589867 HNRNPUQ00839 825 aaKnown RBP eCLIP22.06■■□□□ 1.12
MBD1-221ENST00000589867 CCDC85AQ96PX6 553 aaPredicted RBP22.06■■□□□ 1.12
MBD1-221ENST00000589867 PLA2G12BQ9BX93 195 aa22.06■■□□□ 1.12
MBD1-221ENST00000589867 RTFDC1Q9BY42 306 aaPredicted RBP22.06■■□□□ 1.12
MBD1-221ENST00000589867 POTECB2RU33 542 aa22.05■■□□□ 1.12
MBD1-221ENST00000589867 CTSWP56202 376 aa22.05■■□□□ 1.12
MBD1-221ENST00000589867 ALDH1L2Q3SY69 923 aa22.05■■□□□ 1.12
MBD1-221ENST00000589867 TTLL11Q8NHH1 800 aa22.05■■□□□ 1.12
MBD1-221ENST00000589867 GRIPAP1Q4V328 841 aa22.04■■□□□ 1.12
MBD1-221ENST00000589867 WDR90Q96KV7 1748 aa22.03■■□□□ 1.12
MBD1-221ENST00000589867 CT47B1P0C2W7 299 aaPredicted RBP22.03■■□□□ 1.12
MBD1-221ENST00000589867 C1QTNF8P60827 252 aa22.03■■□□□ 1.12
MBD1-221ENST00000589867 RPS8P62241 208 aaKnown RBP22.03■■□□□ 1.12
MBD1-221ENST00000589867 CCDC152Q4G0S7 254 aa22.03■■□□□ 1.12
MBD1-221ENST00000589867 ZNF541Q9H0D2 1346 aa22.03■■□□□ 1.12
MBD1-221ENST00000589867 FZD9O00144 591 aa22.02■■□□□ 1.12
MBD1-221ENST00000589867 HSP90B1P14625 803 aaKnown RBP22.02■■□□□ 1.12
MBD1-221ENST00000589867 TMC4Q7Z404 712 aa22.02■■□□□ 1.12
MBD1-221ENST00000589867 GREM2Q9H772 168 aa22.02■■□□□ 1.12
MBD1-221ENST00000589867 RRAGCQ9HB90 399 aa22.02■■□□□ 1.12
MBD1-221ENST00000589867 KDM2BQ8NHM5 1336 aa22.02■■□□□ 1.12
MBD1-221ENST00000589867 RTL9Q8NET4 1388 aa22.01■■□□□ 1.11
MBD1-221ENST00000589867 CSF1RP07333 972 aa22.01■■□□□ 1.11
MBD1-221ENST00000589867 RARSP54136 660 aaKnown RBP22.01■■□□□ 1.11
MBD1-221ENST00000589867 BRPF1P55201 1214 aaPredicted RBP22.01■■□□□ 1.11
MBD1-221ENST00000589867 EPHA10Q5JZY3 1008 aa22.01■■□□□ 1.11
MBD1-221ENST00000589867 MPNDQ8N594 471 aa22.01■■□□□ 1.11
MBD1-221ENST00000589867 PTPRCP08575 1304 aa22.01■■□□□ 1.11
MBD1-221ENST00000589867 DDNO94850 711 aaPredicted RBP22■■□□□ 1.11
MBD1-221ENST00000589867 GPSM2P81274 684 aa22■■□□□ 1.11
MBD1-221ENST00000589867 FOXO4P98177 505 aa22■■□□□ 1.11
MBD1-221ENST00000589867 SLC4A10Q6U841 1118 aa22■■□□□ 1.11
MBD1-221ENST00000589867 SMC4Q9NTJ3 1288 aa22■■□□□ 1.11
MBD1-221ENST00000589867 SPEF2Q9C093 1822 aa21.99■■□□□ 1.11
MBD1-221ENST00000589867 ALDH1L1O75891 902 aa21.99■■□□□ 1.11
MBD1-221ENST00000589867 AOC3Q16853 763 aa21.99■■□□□ 1.11
MBD1-221ENST00000589867 DPP8Q6V1X1 898 aaPredicted RBP21.99■■□□□ 1.11
MBD1-221ENST00000589867 GRM8O00222 908 aa21.98■■□□□ 1.11
MBD1-221ENST00000589867 KAZALD1Q96I82 304 aa21.98■■□□□ 1.11
MBD1-221ENST00000589867 SRCIN1Q9C0H9 1055 aa21.98■■□□□ 1.11
MBD1-221ENST00000589867 POLLQ9UGP5 575 aa21.98■■□□□ 1.11
MBD1-221ENST00000589867 FAM161AQ3B820 660 aa21.97■■□□□ 1.11
MBD1-221ENST00000589867 UTYO14607 1347 aa21.97■■□□□ 1.11
MBD1-221ENST00000589867 ZBED9Q6R2W3 1325 aa21.97■■□□□ 1.11
MBD1-221ENST00000589867 PPIP5K2O43314 1243 aa21.96■■□□□ 1.11
MBD1-221ENST00000589867 LARGE2Q8N3Y3 721 aa21.96■■□□□ 1.11
MBD1-221ENST00000589867 VPS33BQ9H267 617 aa21.96■■□□□ 1.11
MBD1-221ENST00000589867 NOB1Q9ULX3 412 aaKnown RBP21.96■■□□□ 1.11
MBD1-221ENST00000589867 WTIPA6NIX2 430 aaPredicted RBP21.95■■□□□ 1.1
MBD1-221ENST00000589867 NBPF7P0C2Y1 421 aaPredicted RBP21.95■■□□□ 1.1
MBD1-221ENST00000589867 KIAA2012Q0VF49 1180 aa21.95■■□□□ 1.1
MBD1-221ENST00000589867 DPY19L2Q6NUT2 758 aa21.95■■□□□ 1.1
MBD1-221ENST00000589867 L3MBTL3Q96JM7 780 aaPredicted RBP21.95■■□□□ 1.1
MBD1-221ENST00000589867 GPR101Q96P66 508 aaPredicted RBP21.95■■□□□ 1.1
MBD1-221ENST00000589867 PODXL2Q9NZ53 605 aa21.95■■□□□ 1.1
MBD1-221ENST00000589867 NSFL1CQ9UNZ2 370 aaKnown RBP21.95■■□□□ 1.1
MBD1-221ENST00000589867 ITGA6P23229 1130 aa21.94■■□□□ 1.1
MBD1-221ENST00000589867 ANKRD18AQ8IVF6 992 aa21.94■■□□□ 1.1
MBD1-221ENST00000589867 SUPT20HQ8NEM7 779 aa21.94■■□□□ 1.1
MBD1-221ENST00000589867 TBC1D16Q8TBP0 767 aa21.94■■□□□ 1.1
MBD1-221ENST00000589867 SUCLG2Q96I99 432 aa21.94■■□□□ 1.1
MBD1-221ENST00000589867 TMX4Q9H1E5 349 aaPredicted RBP21.94■■□□□ 1.1
MBD1-221ENST00000589867 TOMM70O94826 608 aa21.93■■□□□ 1.1
MBD1-221ENST00000589867 VEGFAP15692 232 aaPredicted RBP21.93■■□□□ 1.1
MBD1-221ENST00000589867 JDP2Q8WYK2 163 aa21.93■■□□□ 1.1
MBD1-221ENST00000589867 CDC5LQ99459 802 aaKnown RBP21.93■■□□□ 1.1
MBD1-221ENST00000589867 BSDC1Q9NW68 430 aaPredicted RBP21.93■■□□□ 1.1
MBD1-221ENST00000589867 YDJCA8MPS7 323 aa21.92■■□□□ 1.1
MBD1-221ENST00000589867 USP44Q9H0E7 712 aa21.92■■□□□ 1.1
MBD1-221ENST00000589867 C9orf78Q9NZ63 289 aaPredicted RBP21.92■■□□□ 1.1
MBD1-221ENST00000589867 MINPP1Q9UNW1 487 aa21.92■■□□□ 1.1
MBD1-221ENST00000589867 BCAR3O75815 825 aa21.91■■□□□ 1.1
MBD1-221ENST00000589867 LMBR1LQ6UX01 489 aa21.91■■□□□ 1.1
MBD1-221ENST00000589867 NIM1KQ8IY84 436 aa21.91■■□□□ 1.1
MBD1-221ENST00000589867 SCN4AP35499 1836 aa21.91■■□□□ 1.1
MBD1-221ENST00000589867 SCN9AQ15858 1988 aa21.9■■□□□ 1.1
MBD1-221ENST00000589867 CXCL9Q07325 125 aa21.9■■□□□ 1.1
MBD1-221ENST00000589867 RBM46Q8TBY0 533 aaKnown RBP21.9■■□□□ 1.1
MBD1-221ENST00000589867 ZNRF3Q9ULT6 936 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms