RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 PDE8AO60658 829 aa12.53□□□□□ -0.4
VPS25-203ENST00000589520 FRAT2O75474 233 aaPredicted RBP12.53□□□□□ -0.4
VPS25-203ENST00000589520 MAP4K4O95819 1239 aaPredicted RBP12.53□□□□□ -0.4
VPS25-203ENST00000589520 SIK1P57059 783 aa12.53□□□□□ -0.4
VPS25-203ENST00000589520 RAB3GAP1Q15042 981 aa12.53□□□□□ -0.4
VPS25-203ENST00000589520 RNF20Q5VTR2 975 aa12.53□□□□□ -0.4
VPS25-203ENST00000589520 JARID2Q92833 1246 aaPredicted RBP12.53□□□□□ -0.4
VPS25-203ENST00000589520 ARXQ96QS3 562 aa12.53□□□□□ -0.4
VPS25-203ENST00000589520 FSD1Q9BTV5 496 aa12.53□□□□□ -0.4
VPS25-203ENST00000589520 TM6SF1Q9BZW5 370 aa12.53□□□□□ -0.4
VPS25-203ENST00000589520 BOLA2Q9H3K6 86 aa12.53□□□□□ -0.4
VPS25-203ENST00000589520 DBNLQ9UJU6 430 aaKnown RBP12.53□□□□□ -0.4
VPS25-203ENST00000589520 ANKRD18BA2A2Z9 1011 aa12.52□□□□□ -0.41
VPS25-203ENST00000589520 ZKSCAN1P17029 563 aaPredicted RBP12.52□□□□□ -0.41
VPS25-203ENST00000589520 HMGB2P26583 209 aaKnown RBP12.52□□□□□ -0.41
VPS25-203ENST00000589520 PSMA5P28066 241 aa12.52□□□□□ -0.41
VPS25-203ENST00000589520 TAF7LQ5H9L4 462 aa12.52□□□□□ -0.41
VPS25-203ENST00000589520 CCDC158Q5M9N0 1113 aa12.52□□□□□ -0.41
VPS25-203ENST00000589520 CLEC4GQ6UXB4 293 aa12.52□□□□□ -0.41
VPS25-203ENST00000589520 CLEC17AQ6ZS10 378 aa12.52□□□□□ -0.41
VPS25-203ENST00000589520 SPRYD3Q8NCJ5 442 aa12.52□□□□□ -0.41
VPS25-203ENST00000589520 HMG20BQ9P0W2 317 aa12.52□□□□□ -0.41
VPS25-203ENST00000589520 TRMT112Q9UI30 125 aaKnown RBP12.52□□□□□ -0.41
VPS25-203ENST00000589520 ZNF652Q9Y2D9 606 aa12.52□□□□□ -0.41
VPS25-203ENST00000589520 ABCC12Q96J65 1359 aa12.52□□□□□ -0.41
VPS25-203ENST00000589520 CD2BP2O95400 341 aaKnown RBP12.51□□□□□ -0.41
VPS25-203ENST00000589520 MCM4P33991 863 aa12.51□□□□□ -0.41
VPS25-203ENST00000589520 HLFQ16534 295 aa12.51□□□□□ -0.41
VPS25-203ENST00000589520 INTS5Q6P9B9 1019 aaKnown RBP12.51□□□□□ -0.41
VPS25-203ENST00000589520 MAP4K1Q92918 833 aa12.51□□□□□ -0.41
VPS25-203ENST00000589520 PALLDQ8WX93 1383 aa12.51□□□□□ -0.41
VPS25-203ENST00000589520 CICQ96RK0 1608 aaPredicted RBP12.51□□□□□ -0.41
VPS25-203ENST00000589520 GOLGA6L22H0YM25 854 aa12.5□□□□□ -0.41
VPS25-203ENST00000589520 IRS4O14654 1257 aaPredicted RBP12.5□□□□□ -0.41
VPS25-203ENST00000589520 PDIA4P13667 645 aaKnown RBP12.5□□□□□ -0.41
VPS25-203ENST00000589520 CRKLP46109 303 aaKnown RBP12.5□□□□□ -0.41
VPS25-203ENST00000589520 CTSWP56202 376 aa12.5□□□□□ -0.41
VPS25-203ENST00000589520 CUL4AQ13619 759 aa12.5□□□□□ -0.41
VPS25-203ENST00000589520 SKOR2Q2VWA4 1001 aaPredicted RBP12.5□□□□□ -0.41
VPS25-203ENST00000589520 KBTBD3Q8NAB2 608 aa12.5□□□□□ -0.41
VPS25-203ENST00000589520 TTLL11Q8NHH1 800 aa12.5□□□□□ -0.41
VPS25-203ENST00000589520 FAM89AQ96GI7 184 aa12.5□□□□□ -0.41
VPS25-203ENST00000589520 NEUROD6Q96NK8 337 aa12.5□□□□□ -0.41
VPS25-203ENST00000589520 C8orf37Q96NL8 207 aa12.5□□□□□ -0.41
VPS25-203ENST00000589520 DBNDD2Q9BQY9 259 aa12.5□□□□□ -0.41
VPS25-203ENST00000589520 UTP14AQ9BVJ6 771 aaKnown RBP12.5□□□□□ -0.41
VPS25-203ENST00000589520 HELLSQ9NRZ9 838 aa12.5□□□□□ -0.41
VPS25-203ENST00000589520 TLR7Q9NYK1 1049 aaKnown RBP12.5□□□□□ -0.41
VPS25-203ENST00000589520 CCDC171Q6TFL3 1326 aa12.5□□□□□ -0.41
VPS25-203ENST00000589520 BCL9LQ86UU0 1499 aa12.5□□□□□ -0.41
VPS25-203ENST00000589520 NMIQ13287 307 aaPredicted RBP12.49□□□□□ -0.41
VPS25-203ENST00000589520 KRT32Q14532 448 aa12.49□□□□□ -0.41
VPS25-203ENST00000589520 NECTIN1Q15223 517 aa12.49□□□□□ -0.41
VPS25-203ENST00000589520 TSGA10IPQ3SY00 556 aa12.49□□□□□ -0.41
VPS25-203ENST00000589520 RC3H1Q5TC82 1133 aaKnown RBP12.49□□□□□ -0.41
VPS25-203ENST00000589520 ACSBG1Q96GR2 724 aa12.49□□□□□ -0.41
VPS25-203ENST00000589520 ZNF512BQ96KM6 892 aaPredicted RBP12.49□□□□□ -0.41
VPS25-203ENST00000589520 ZSCAN31Q96LW9 406 aaPredicted RBP12.49□□□□□ -0.41
VPS25-203ENST00000589520 ALDH8A1Q9H2A2 487 aaPredicted RBP12.49□□□□□ -0.41
VPS25-203ENST00000589520 USP21Q9UK80 565 aa12.49□□□□□ -0.41
VPS25-203ENST00000589520 PALD1Q9ULE6 856 aa12.49□□□□□ -0.41
VPS25-203ENST00000589520 SNX14Q9Y5W7 946 aa12.49□□□□□ -0.41
VPS25-203ENST00000589520 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.49□□□□□ -0.41
VPS25-203ENST00000589520 SH3TC1Q8TE82 1336 aa12.48□□□□□ -0.41
VPS25-203ENST00000589520 A0A1B0GUL7 405 aa12.48□□□□□ -0.41
VPS25-203ENST00000589520 ZFYP08048 801 aaPredicted RBP12.48□□□□□ -0.41
VPS25-203ENST00000589520 KCNJ4P48050 445 aa12.48□□□□□ -0.41
VPS25-203ENST00000589520 RBM6P78332 1123 aaKnown RBP12.48□□□□□ -0.41
VPS25-203ENST00000589520 GSE1Q14687 1217 aa12.48□□□□□ -0.41
VPS25-203ENST00000589520 FAM98CQ17RN3 349 aaKnown RBP12.48□□□□□ -0.41
VPS25-203ENST00000589520 MCMDC2Q4G0Z9 681 aa12.48□□□□□ -0.41
VPS25-203ENST00000589520 VPS53Q5VIR6 699 aa12.48□□□□□ -0.41
VPS25-203ENST00000589520 TMX3Q96JJ7 454 aa12.48□□□□□ -0.41
VPS25-203ENST00000589520 TBC1D2BQ9UPU7 963 aa12.48□□□□□ -0.41
VPS25-203ENST00000589520 RIPOR2Q9Y4F9 1068 aa12.48□□□□□ -0.41
VPS25-203ENST00000589520 U3KPZ7 1027 aaPredicted RBP12.48□□□□□ -0.41
VPS25-203ENST00000589520 TJP1Q07157 1748 aa12.48□□□□□ -0.41
VPS25-203ENST00000589520 ZNF831Q5JPB2 1677 aa12.48□□□□□ -0.41
VPS25-203ENST00000589520 MED23Q9ULK4 1368 aa12.47□□□□□ -0.41
VPS25-203ENST00000589520 MROH5Q6ZUA9 1318 aa12.47□□□□□ -0.41
VPS25-203ENST00000589520 CNTNAP4Q9C0A0 1308 aa12.47□□□□□ -0.41
VPS25-203ENST00000589520 CAMTA2O94983 1202 aa12.47□□□□□ -0.41
VPS25-203ENST00000589520 IFIT1P09914 478 aaKnown RBP12.47□□□□□ -0.41
VPS25-203ENST00000589520 ITGA6P23229 1130 aa12.47□□□□□ -0.41
VPS25-203ENST00000589520 SSFA2P28290 1259 aa12.47□□□□□ -0.41
VPS25-203ENST00000589520 ANKRD1Q15327 319 aa12.47□□□□□ -0.41
VPS25-203ENST00000589520 LRRC24Q50LG9 513 aa12.47□□□□□ -0.41
VPS25-203ENST00000589520 GORABQ5T7V8 394 aa12.47□□□□□ -0.41
VPS25-203ENST00000589520 LDHAL6AQ6ZMR3 332 aa12.47□□□□□ -0.41
VPS25-203ENST00000589520 TNPO1Q92973 898 aaKnown RBP12.47□□□□□ -0.41
VPS25-203ENST00000589520 IL25Q9H293 177 aa12.47□□□□□ -0.41
VPS25-203ENST00000589520 QTRT2Q9H974 415 aaKnown RBP12.47□□□□□ -0.41
VPS25-203ENST00000589520 ZSWIM6Q9HCJ5 1215 aa12.47□□□□□ -0.41
VPS25-203ENST00000589520 PAG1Q9NWQ8 432 aa12.47□□□□□ -0.41
VPS25-203ENST00000589520 CYP46A1Q9Y6A2 500 aa12.47□□□□□ -0.41
VPS25-203ENST00000589520 DOT1LQ8TEK3 1739 aa12.47□□□□□ -0.41
VPS25-203ENST00000589520 AK9Q5TCS8 1911 aa12.47□□□□□ -0.41
VPS25-203ENST00000589520 ZNF609O15014 1411 aa12.46□□□□□ -0.41
VPS25-203ENST00000589520 A0A0G2JS52 829 aa12.46□□□□□ -0.41
VPS25-203ENST00000589520 GPTP24298 496 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms