RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 CTDSPL2Q05D32 466 aa8.11□□□□□ -1.11
DNMT1-220ENST00000589351 ZBTB33Q86T24 672 aa8.11□□□□□ -1.11
DNMT1-220ENST00000589351 IFT172Q9UG01 1749 aa8.11□□□□□ -1.11
DNMT1-220ENST00000589351 NRXN1Q9ULB1 1477 aa8.11□□□□□ -1.11
DNMT1-220ENST00000589351 ANKARQ7Z5J8 1434 aa8.11□□□□□ -1.11
DNMT1-220ENST00000589351 EP400Q96L91 3159 aa8.1□□□□□ -1.11
DNMT1-220ENST00000589351 ADH1AP07327 375 aa8.1□□□□□ -1.11
DNMT1-220ENST00000589351 ADD1P35611 737 aaKnown RBP8.1□□□□□ -1.11
DNMT1-220ENST00000589351 BEND7Q8N7W2 519 aaPredicted RBP8.1□□□□□ -1.11
DNMT1-220ENST00000589351 KDF1Q8NAX2 398 aaPredicted RBP8.1□□□□□ -1.11
DNMT1-220ENST00000589351 ZNF784Q8NCA9 323 aaPredicted RBP8.1□□□□□ -1.11
DNMT1-220ENST00000589351 OCSTAMPQ9BR26 566 aa8.1□□□□□ -1.11
DNMT1-220ENST00000589351 PRDM11Q9NQV5 511 aa8.1□□□□□ -1.11
DNMT1-220ENST00000589351 MBIPQ9NS73 344 aa8.1□□□□□ -1.11
DNMT1-220ENST00000589351 FKBPLQ9UIM3 349 aa8.1□□□□□ -1.11
DNMT1-220ENST00000589351 TRAK1Q9UPV9 953 aa8.1□□□□□ -1.11
DNMT1-220ENST00000589351 BRWD3Q6RI45 1802 aa8.1□□□□□ -1.11
DNMT1-220ENST00000589351 RGPD8O14715 1765 aaPredicted RBP8.1□□□□□ -1.11
DNMT1-220ENST00000589351 GPR25O00155 361 aa8.09□□□□□ -1.11
DNMT1-220ENST00000589351 WASLO00401 505 aaPredicted RBP8.09□□□□□ -1.11
DNMT1-220ENST00000589351 PTGIRP43119 386 aa8.09□□□□□ -1.11
DNMT1-220ENST00000589351 EVA1CP58658 441 aa8.09□□□□□ -1.11
DNMT1-220ENST00000589351 FAM196AQ6ZSG2 479 aa8.09□□□□□ -1.11
DNMT1-220ENST00000589351 LYSMD3Q7Z3D4 306 aa8.09□□□□□ -1.11
DNMT1-220ENST00000589351 NPM2Q86SE8 214 aaKnown RBP8.09□□□□□ -1.11
DNMT1-220ENST00000589351 HIRIP3Q9BW71 556 aaPredicted RBP8.09□□□□□ -1.11
DNMT1-220ENST00000589351 SRCAPQ6ZRS2 3230 aa8.08□□□□□ -1.12
DNMT1-220ENST00000589351 PLCH1Q4KWH8 1693 aa8.08□□□□□ -1.12
DNMT1-220ENST00000589351 LILRA1O75019 489 aa8.08□□□□□ -1.12
DNMT1-220ENST00000589351 BCRP11274 1271 aa8.08□□□□□ -1.12
DNMT1-220ENST00000589351 NEDD1Q8NHV4 660 aa8.08□□□□□ -1.12
DNMT1-220ENST00000589351 DCAF11Q8TEB1 546 aa8.08□□□□□ -1.12
DNMT1-220ENST00000589351 ZNF837Q96EG3 531 aaPredicted RBP8.08□□□□□ -1.12
DNMT1-220ENST00000589351 KRTAP4-8Q9BYQ9 185 aa8.08□□□□□ -1.12
DNMT1-220ENST00000589351 DLC1Q96QB1 1528 aa8.08□□□□□ -1.12
DNMT1-220ENST00000589351 SPATA31A5Q5VU36 1347 aa8.07□□□□□ -1.12
DNMT1-220ENST00000589351 SPATA31A7Q8IWB4 1347 aa8.07□□□□□ -1.12
DNMT1-220ENST00000589351 RHOQP17081 205 aa8.07□□□□□ -1.12
DNMT1-220ENST00000589351 RAB15P59190 212 aa8.07□□□□□ -1.12
DNMT1-220ENST00000589351 TRIM26Q12899 539 aaPredicted RBP8.07□□□□□ -1.12
DNMT1-220ENST00000589351 PDE3BQ13370 1112 aa8.07□□□□□ -1.12
DNMT1-220ENST00000589351 PRICKLE2Q7Z3G6 844 aa8.07□□□□□ -1.12
DNMT1-220ENST00000589351 GALNT6Q8NCL4 622 aa8.07□□□□□ -1.12
DNMT1-220ENST00000589351 LRRN4Q8WUT4 740 aa8.07□□□□□ -1.12
DNMT1-220ENST00000589351 COL14A1Q05707 1796 aaKnown RBP8.07□□□□□ -1.12
DNMT1-220ENST00000589351 CLK2P49760 499 aaKnown RBP8.06□□□□□ -1.12
DNMT1-220ENST00000589351 R3HDM1Q15032 1099 aaKnown RBP8.06□□□□□ -1.12
DNMT1-220ENST00000589351 DBN1Q16643 649 aa8.06□□□□□ -1.12
DNMT1-220ENST00000589351 NBPF8Q3BBV2 869 aa8.06□□□□□ -1.12
DNMT1-220ENST00000589351 PODNQ7Z5L7 613 aa8.06□□□□□ -1.12
DNMT1-220ENST00000589351 TRIM22Q8IYM9 498 aa8.06□□□□□ -1.12
DNMT1-220ENST00000589351 ACDQ96AP0 544 aa8.06□□□□□ -1.12
DNMT1-220ENST00000589351 NUDT16Q96DE0 195 aaKnown RBP8.06□□□□□ -1.12
DNMT1-220ENST00000589351 AK7Q96M32 723 aa8.06□□□□□ -1.12
DNMT1-220ENST00000589351 STRN4Q9NRL3 753 aa8.06□□□□□ -1.12
DNMT1-220ENST00000589351 LRP5O75197 1615 aa8.05□□□□□ -1.12
DNMT1-220ENST00000589351 K7ELQ4 463 aaPredicted RBP8.05□□□□□ -1.12
DNMT1-220ENST00000589351 ERVH48-1M5A8F1 160 aa8.05□□□□□ -1.12
DNMT1-220ENST00000589351 APBA3O96018 575 aa8.05□□□□□ -1.12
DNMT1-220ENST00000589351 NR6A1Q15406 480 aa8.05□□□□□ -1.12
DNMT1-220ENST00000589351 FAM182BQ5T319 152 aa8.05□□□□□ -1.12
DNMT1-220ENST00000589351 ADAM32Q8TC27 787 aa8.05□□□□□ -1.12
DNMT1-220ENST00000589351 SPATA31A1Q5TZJ5 1347 aa8.04□□□□□ -1.12
DNMT1-220ENST00000589351 RGPD1P0DJD0 1748 aa8.04□□□□□ -1.12
DNMT1-220ENST00000589351 TRIM37O94972 964 aa8.04□□□□□ -1.12
DNMT1-220ENST00000589351 ZC3H6P61129 1189 aaKnown RBP8.04□□□□□ -1.12
DNMT1-220ENST00000589351 PTK2Q05397 1052 aa8.04□□□□□ -1.12
DNMT1-220ENST00000589351 EZH2Q15910 746 aaKnown RBP8.04□□□□□ -1.12
DNMT1-220ENST00000589351 ABTB2Q8N961 1025 aa8.04□□□□□ -1.12
DNMT1-220ENST00000589351 POLR3EQ9NVU0 708 aa8.04□□□□□ -1.12
DNMT1-220ENST00000589351 PARD3Q8TEW0 1356 aa8.04□□□□□ -1.12
DNMT1-220ENST00000589351 ADGRB2O60241 1585 aa8.04□□□□□ -1.12
DNMT1-220ENST00000589351 PRR36Q9H6K5 1346 aa8.03□□□□□ -1.12
DNMT1-220ENST00000589351 ZC3H4Q9UPT8 1303 aaKnown RBP8.03□□□□□ -1.12
DNMT1-220ENST00000589351 TULP4Q9NRJ4 1543 aa8.03□□□□□ -1.12
DNMT1-220ENST00000589351 ABCA3Q99758 1704 aa8.03□□□□□ -1.12
DNMT1-220ENST00000589351 RNF144AP50876 292 aaPredicted RBP8.03□□□□□ -1.12
DNMT1-220ENST00000589351 CHRNA2Q15822 529 aa8.03□□□□□ -1.12
DNMT1-220ENST00000589351 FOXR1Q6PIV2 292 aa8.03□□□□□ -1.12
DNMT1-220ENST00000589351 NLRP13Q86W25 1043 aa8.03□□□□□ -1.12
DNMT1-220ENST00000589351 GMCL1Q96IK5 515 aa8.03□□□□□ -1.12
DNMT1-220ENST00000589351 CDK19Q9BWU1 502 aa8.03□□□□□ -1.12
DNMT1-220ENST00000589351 USP35Q9P2H5 1018 aa8.03□□□□□ -1.12
DNMT1-220ENST00000589351 THRAP3Q9Y2W1 955 aaKnown RBP8.03□□□□□ -1.12
DNMT1-220ENST00000589351 ALS2Q96Q42 1657 aa8.02□□□□□ -1.13
DNMT1-220ENST00000589351 KIAA0232Q92628 1395 aa8.02□□□□□ -1.13
DNMT1-220ENST00000589351 NBPF20Q3BBV1 942 aa8.02□□□□□ -1.13
DNMT1-220ENST00000589351 RIPOR1Q6ZS17 1223 aa8.02□□□□□ -1.13
DNMT1-220ENST00000589351 CAMKK2Q96RR4 588 aa8.02□□□□□ -1.13
DNMT1-220ENST00000589351 PPP1R1BQ9UD71 204 aaPredicted RBP8.02□□□□□ -1.13
DNMT1-220ENST00000589351 NRAPQ86VF7 1730 aa8.02□□□□□ -1.13
DNMT1-220ENST00000589351 TRPM3Q9HCF6 1732 aaPredicted RBP8.02□□□□□ -1.13
DNMT1-220ENST00000589351 DISP2A7MBM2 1401 aa8.02□□□□□ -1.13
DNMT1-220ENST00000589351 ACEP12821 1306 aa8.02□□□□□ -1.13
DNMT1-220ENST00000589351 ATP7BP35670 1465 aa8.01□□□□□ -1.13
DNMT1-220ENST00000589351 ITSN1Q15811 1721 aa8.01□□□□□ -1.13
DNMT1-220ENST00000589351 RAB3GAP2Q9H2M9 1393 aa8.01□□□□□ -1.13
DNMT1-220ENST00000589351 PDE4DQ08499 809 aa8.01□□□□□ -1.13
DNMT1-220ENST00000589351 NUTM2GQ5VZR2 741 aa8.01□□□□□ -1.13
DNMT1-220ENST00000589351 Q8N3U1 123 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms