RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 BMP2KQ9NSY1 1161 aaPredicted RBP10.75□□□□□ -0.69
SMAD4-206ENST00000588860 NHSQ6T4R5 1651 aa10.75□□□□□ -0.69
SMAD4-206ENST00000588860 BCORQ6W2J9 1755 aa10.75□□□□□ -0.69
SMAD4-206ENST00000588860 POTEFA5A3E0 1075 aa10.74□□□□□ -0.69
SMAD4-206ENST00000588860 TRIM6-TRIM34B2RNG4 842 aa10.74□□□□□ -0.69
SMAD4-206ENST00000588860 CYP19A1P11511 503 aaPredicted RBP10.74□□□□□ -0.69
SMAD4-206ENST00000588860 TIE1P35590 1138 aa10.74□□□□□ -0.69
SMAD4-206ENST00000588860 RBM25P49756 843 aaKnown RBP10.74□□□□□ -0.69
SMAD4-206ENST00000588860 CASP7P55210 303 aa10.74□□□□□ -0.69
SMAD4-206ENST00000588860 FAM98CQ17RN3 349 aaKnown RBP10.74□□□□□ -0.69
SMAD4-206ENST00000588860 SLC4A9Q96Q91 983 aa10.74□□□□□ -0.69
SMAD4-206ENST00000588860 CASZ1Q86V15 1759 aa10.74□□□□□ -0.69
SMAD4-206ENST00000588860 SPEF2Q9C093 1822 aa10.73□□□□□ -0.69
SMAD4-206ENST00000588860 H7C1W4 665 aa10.73□□□□□ -0.69
SMAD4-206ENST00000588860 CLASRPQ8N2M8 674 aaKnown RBP10.73□□□□□ -0.69
SMAD4-206ENST00000588860 CCDC191Q8NCU4 936 aa10.73□□□□□ -0.69
SMAD4-206ENST00000588860 RILPL2Q969X0 211 aa10.73□□□□□ -0.69
SMAD4-206ENST00000588860 ARXQ96QS3 562 aa10.73□□□□□ -0.69
SMAD4-206ENST00000588860 SIL1Q9H173 461 aa10.73□□□□□ -0.69
SMAD4-206ENST00000588860 SPON1Q9HCB6 807 aa10.73□□□□□ -0.69
SMAD4-206ENST00000588860 FBXO3Q9UK99 471 aa10.73□□□□□ -0.69
SMAD4-206ENST00000588860 MAP3K15Q6ZN16 1313 aa10.73□□□□□ -0.69
SMAD4-206ENST00000588860 LAMB2P55268 1798 aa10.72□□□□□ -0.69
SMAD4-206ENST00000588860 IFIT2P09913 472 aaKnown RBP10.72□□□□□ -0.69
SMAD4-206ENST00000588860 MYT1Q01538 1121 aa10.72□□□□□ -0.69
SMAD4-206ENST00000588860 TCIRG1Q13488 830 aa10.72□□□□□ -0.69
SMAD4-206ENST00000588860 RABL6Q3YEC7 729 aaPredicted RBP10.72□□□□□ -0.69
SMAD4-206ENST00000588860 AACSQ86V21 672 aa10.72□□□□□ -0.69
SMAD4-206ENST00000588860 KLHDC4Q8TBB5 520 aa10.72□□□□□ -0.69
SMAD4-206ENST00000588860 GPATCH3Q96I76 525 aa10.72□□□□□ -0.69
SMAD4-206ENST00000588860 ISCA1Q9BUE6 129 aa10.72□□□□□ -0.69
SMAD4-206ENST00000588860 ZBTB1Q9Y2K1 713 aa10.72□□□□□ -0.69
SMAD4-206ENST00000588860 CHMP3Q9Y3E7 222 aa10.72□□□□□ -0.69
SMAD4-206ENST00000588860 USP42Q9H9J4 1324 aaKnown RBP10.72□□□□□ -0.69
SMAD4-206ENST00000588860 TAF1LQ8IZX4 1826 aa10.72□□□□□ -0.69
SMAD4-206ENST00000588860 ERC2O15083 957 aa10.71□□□□□ -0.69
SMAD4-206ENST00000588860 SASH1O94885 1247 aa10.71□□□□□ -0.69
SMAD4-206ENST00000588860 RFX5P48382 616 aaPredicted RBP10.71□□□□□ -0.69
SMAD4-206ENST00000588860 FOXO4P98177 505 aa10.71□□□□□ -0.69
SMAD4-206ENST00000588860 RTL5Q5HYW3 569 aaPredicted RBP10.71□□□□□ -0.69
SMAD4-206ENST00000588860 TTC41PQ6P2S7 1318 aa10.71□□□□□ -0.69
SMAD4-206ENST00000588860 PLCD3Q8N3E9 789 aa10.71□□□□□ -0.69
SMAD4-206ENST00000588860 PI4K2BQ8TCG2 481 aa10.71□□□□□ -0.69
SMAD4-206ENST00000588860 PALLDQ8WX93 1383 aa10.71□□□□□ -0.69
SMAD4-206ENST00000588860 CAMKK2Q96RR4 588 aa10.71□□□□□ -0.69
SMAD4-206ENST00000588860 COPRSQ9NQ92 184 aa10.71□□□□□ -0.69
SMAD4-206ENST00000588860 DDX60Q8IY21 1712 aaKnown RBP10.7□□□□□ -0.7
SMAD4-206ENST00000588860 MAP3K13O43283 966 aa10.7□□□□□ -0.7
SMAD4-206ENST00000588860 KCNQ2O43526 872 aa10.7□□□□□ -0.7
SMAD4-206ENST00000588860 REC8O95072 547 aa10.7□□□□□ -0.7
SMAD4-206ENST00000588860 MAP4K4O95819 1239 aaPredicted RBP10.7□□□□□ -0.7
SMAD4-206ENST00000588860 LMBR1LQ6UX01 489 aa10.7□□□□□ -0.7
SMAD4-206ENST00000588860 SMARCC1Q92922 1105 aaPredicted RBP10.7□□□□□ -0.7
SMAD4-206ENST00000588860 TBC1D2Q9BYX2 928 aa10.7□□□□□ -0.7
SMAD4-206ENST00000588860 LY75O60449 1722 aa10.7□□□□□ -0.7
SMAD4-206ENST00000588860 MYH7P12883 1935 aa10.69□□□□□ -0.7
SMAD4-206ENST00000588860 LOC102724428A0A0B4J2F2 783 aa10.69□□□□□ -0.7
SMAD4-206ENST00000588860 GLRX3O76003 335 aaKnown RBP10.69□□□□□ -0.7
SMAD4-206ENST00000588860 CHMLP26374 656 aa10.69□□□□□ -0.7
SMAD4-206ENST00000588860 ATP6V1AP38606 617 aa10.69□□□□□ -0.7
SMAD4-206ENST00000588860 IL6STP40189 918 aaPredicted RBP10.69□□□□□ -0.7
SMAD4-206ENST00000588860 SIK1P57059 783 aa10.69□□□□□ -0.7
SMAD4-206ENST00000588860 PTPN12Q05209 780 aaKnown RBP10.69□□□□□ -0.7
SMAD4-206ENST00000588860 TRIM28Q13263 835 aaKnown RBP10.69□□□□□ -0.7
SMAD4-206ENST00000588860 HLFQ16534 295 aa10.69□□□□□ -0.7
SMAD4-206ENST00000588860 HSP90AB3PQ58FF7 597 aa10.69□□□□□ -0.7
SMAD4-206ENST00000588860 FAM182BQ5T319 152 aa10.69□□□□□ -0.7
SMAD4-206ENST00000588860 GIGYF2Q6Y7W6 1299 aaKnown RBP10.69□□□□□ -0.7
SMAD4-206ENST00000588860 HSCBQ8IWL3 235 aa10.69□□□□□ -0.7
SMAD4-206ENST00000588860 CNTROBQ8N137 903 aa10.69□□□□□ -0.7
SMAD4-206ENST00000588860 ESYT1Q9BSJ8 1104 aa10.69□□□□□ -0.7
SMAD4-206ENST00000588860 USP26Q9BXU7 913 aa10.69□□□□□ -0.7
SMAD4-206ENST00000588860 ECHDC1Q9NTX5 307 aa10.69□□□□□ -0.7
SMAD4-206ENST00000588860 CCDC87Q9NVE4 849 aa10.69□□□□□ -0.7
SMAD4-206ENST00000588860 TRPC6Q9Y210 931 aa10.69□□□□□ -0.7
SMAD4-206ENST00000588860 SCN7AQ01118 1682 aa10.69□□□□□ -0.7
SMAD4-206ENST00000588860 PCCAP05165 728 aaPredicted RBP10.68□□□□□ -0.7
SMAD4-206ENST00000588860 GPTP24298 496 aa10.68□□□□□ -0.7
SMAD4-206ENST00000588860 DZIP3Q86Y13 1208 aaKnown RBP10.68□□□□□ -0.7
SMAD4-206ENST00000588860 EAF2Q96CJ1 260 aaPredicted RBP10.68□□□□□ -0.7
SMAD4-206ENST00000588860 CCDC8Q9H0W5 538 aaPredicted RBP10.68□□□□□ -0.7
SMAD4-206ENST00000588860 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.68□□□□□ -0.7
SMAD4-206ENST00000588860 CEP350Q5VT06 3117 aa10.67□□□□□ -0.7
SMAD4-206ENST00000588860 CRKLP46109 303 aaKnown RBP10.67□□□□□ -0.7
SMAD4-206ENST00000588860 TFCP2Q12800 502 aa10.67□□□□□ -0.7
SMAD4-206ENST00000588860 ITPK1Q13572 414 aa10.67□□□□□ -0.7
SMAD4-206ENST00000588860 INTS5Q6P9B9 1019 aaKnown RBP10.67□□□□□ -0.7
SMAD4-206ENST00000588860 ZBTB38Q8NAP3 1195 aaPredicted RBP10.67□□□□□ -0.7
SMAD4-206ENST00000588860 KIF2CQ99661 725 aa10.67□□□□□ -0.7
SMAD4-206ENST00000588860 TLR7Q9NYK1 1049 aaKnown RBP10.67□□□□□ -0.7
SMAD4-206ENST00000588860 TBC1D2BQ9UPU7 963 aa10.67□□□□□ -0.7
SMAD4-206ENST00000588860 ERVV-1B6SEH8 477 aa10.66□□□□□ -0.7
SMAD4-206ENST00000588860 EIF5P55010 431 aaKnown RBP10.66□□□□□ -0.7
SMAD4-206ENST00000588860 NBR1Q14596 966 aa10.66□□□□□ -0.7
SMAD4-206ENST00000588860 TNNI3KQ59H18 835 aa10.66□□□□□ -0.7
SMAD4-206ENST00000588860 NLRP10Q86W26 655 aa10.66□□□□□ -0.7
SMAD4-206ENST00000588860 SNX21Q969T3 373 aa10.66□□□□□ -0.7
SMAD4-206ENST00000588860 FAM89AQ96GI7 184 aa10.66□□□□□ -0.7
SMAD4-206ENST00000588860 FPGT-TNNI3KV9GXZ4 949 aa10.66□□□□□ -0.7
SMAD4-206ENST00000588860 UTRNP46939 3433 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms