RNA–Protein interactions for RNA: ENST00000585879.1

RPRD1A-203, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 425 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-203ENST00000585879 HINFPQ9BQA5 517 aa9.24□□□□□ -0.93
RPRD1A-203ENST00000585879 KLK14Q9P0G3 267 aa9.24□□□□□ -0.93
RPRD1A-203ENST00000585879 TARSP26639 723 aaKnown RBP9.23□□□□□ -0.93
RPRD1A-203ENST00000585879 DPYDQ12882 1025 aa9.23□□□□□ -0.93
RPRD1A-203ENST00000585879 LARP1Q6PKG0 1096 aaKnown RBP9.23□□□□□ -0.93
RPRD1A-203ENST00000585879 WFDC8Q8IUA0 241 aa9.23□□□□□ -0.93
RPRD1A-203ENST00000585879 GLMNQ92990 594 aa9.23□□□□□ -0.93
RPRD1A-203ENST00000585879 MEGF10Q96KG7 1140 aa9.23□□□□□ -0.93
RPRD1A-203ENST00000585879 RNF112Q9ULX5 631 aa9.23□□□□□ -0.93
RPRD1A-203ENST00000585879 DEAF1O75398 565 aaPredicted RBP9.22□□□□□ -0.93
RPRD1A-203ENST00000585879 LGR5O75473 907 aa9.22□□□□□ -0.93
RPRD1A-203ENST00000585879 ARSDP51689 593 aa9.22□□□□□ -0.93
RPRD1A-203ENST00000585879 KANK4Q5T7N3 995 aaPredicted RBP9.22□□□□□ -0.93
RPRD1A-203ENST00000585879 ELMSAN1Q6PJG2 1045 aa9.22□□□□□ -0.93
RPRD1A-203ENST00000585879 KRT25Q7Z3Z0 450 aa9.22□□□□□ -0.93
RPRD1A-203ENST00000585879 FNBP4Q8N3X1 1017 aaPredicted RBP9.22□□□□□ -0.93
RPRD1A-203ENST00000585879 QTRT2Q9H974 415 aaKnown RBP9.21□□□□□ -0.94
RPRD1A-203ENST00000585879 DLL1O00548 723 aa9.2□□□□□ -0.94
RPRD1A-203ENST00000585879 SASH3O75995 380 aa9.2□□□□□ -0.94
RPRD1A-203ENST00000585879 RARAP10276 462 aa9.2□□□□□ -0.94
RPRD1A-203ENST00000585879 MLLT1Q03111 559 aaPredicted RBP9.2□□□□□ -0.94
RPRD1A-203ENST00000585879 DGKZQ13574 1117 aa9.2□□□□□ -0.94
RPRD1A-203ENST00000585879 FAM196BA6NMK8 535 aa9.19□□□□□ -0.94
RPRD1A-203ENST00000585879 MICAL2O94851 1124 aa9.19□□□□□ -0.94
RPRD1A-203ENST00000585879 NRLP54845 237 aa9.19□□□□□ -0.94
RPRD1A-203ENST00000585879 PRR23CQ6ZRP0 262 aa9.19□□□□□ -0.94
RPRD1A-203ENST00000585879 ANKMY2Q8IV38 441 aa9.19□□□□□ -0.94
RPRD1A-203ENST00000585879 MYO19Q96H55 970 aa9.19□□□□□ -0.94
RPRD1A-203ENST00000585879 SMG9Q9H0W8 520 aaKnown RBP9.19□□□□□ -0.94
RPRD1A-203ENST00000585879 USP17L15C9J2P7 530 aa9.18□□□□□ -0.94
RPRD1A-203ENST00000585879 USP17L10C9JJH3 530 aa9.18□□□□□ -0.94
RPRD1A-203ENST00000585879 USP17L13C9JLJ4 530 aa9.18□□□□□ -0.94
RPRD1A-203ENST00000585879 USP17L12C9JPN9 530 aa9.18□□□□□ -0.94
RPRD1A-203ENST00000585879 USP17L11C9JVI0 530 aa9.18□□□□□ -0.94
RPRD1A-203ENST00000585879 USP17L21D6R901 530 aa9.18□□□□□ -0.94
RPRD1A-203ENST00000585879 USP17L18D6R9N7 530 aa9.18□□□□□ -0.94
RPRD1A-203ENST00000585879 USP17L22D6RA61 530 aa9.18□□□□□ -0.94
RPRD1A-203ENST00000585879 USP17L17D6RBQ6 530 aa9.18□□□□□ -0.94
RPRD1A-203ENST00000585879 USP17L19D6RCP7 530 aa9.18□□□□□ -0.94
RPRD1A-203ENST00000585879 USP17L20D6RJB6 530 aa9.18□□□□□ -0.94
RPRD1A-203ENST00000585879 USP17L24Q0WX57 530 aa9.18□□□□□ -0.94
RPRD1A-203ENST00000585879 DZIP1LQ8IYY4 767 aaKnown RBP9.18□□□□□ -0.94
RPRD1A-203ENST00000585879 OPLAHO14841 1288 aa9.17□□□□□ -0.94
RPRD1A-203ENST00000585879 FOXO3O43524 673 aa9.17□□□□□ -0.94
RPRD1A-203ENST00000585879 EGFRP00533 1210 aa9.17□□□□□ -0.94
RPRD1A-203ENST00000585879 WEE1P30291 646 aa9.17□□□□□ -0.94
RPRD1A-203ENST00000585879 C11orf91Q3C1V1 193 aa9.17□□□□□ -0.94
RPRD1A-203ENST00000585879 ARXQ96QS3 562 aa9.17□□□□□ -0.94
RPRD1A-203ENST00000585879 PPP1R12CQ9BZL4 782 aa9.17□□□□□ -0.94
RPRD1A-203ENST00000585879 TLR7Q9NYK1 1049 aaKnown RBP9.17□□□□□ -0.94
RPRD1A-203ENST00000585879 HFE2Q6ZVN8 426 aa9.16□□□□□ -0.94
RPRD1A-203ENST00000585879 KRTAP19-1Q8IUB9 90 aa9.16□□□□□ -0.94
RPRD1A-203ENST00000585879 TMEM130Q8N3G9 435 aa9.16□□□□□ -0.94
RPRD1A-203ENST00000585879 RTCBQ9Y3I0 505 aaKnown RBP9.16□□□□□ -0.94
RPRD1A-203ENST00000585879 PROSER2Q86WR7 435 aaPredicted RBP9.15□□□□□ -0.94
RPRD1A-203ENST00000585879 CLUAP1Q96AJ1 413 aa9.15□□□□□ -0.94
RPRD1A-203ENST00000585879 AKTIPQ9H8T0 292 aa9.15□□□□□ -0.94
RPRD1A-203ENST00000585879 EIF2AK2P19525 551 aaKnown RBP9.14□□□□□ -0.95
RPRD1A-203ENST00000585879 ARID4AP29374 1257 aaPredicted RBP9.14□□□□□ -0.95
RPRD1A-203ENST00000585879 SLC51AQ86UW1 340 aa9.14□□□□□ -0.95
RPRD1A-203ENST00000585879 LRFN2Q9ULH4 789 aa9.14□□□□□ -0.95
RPRD1A-203ENST00000585879 USP20Q9Y2K6 914 aa9.14□□□□□ -0.95
RPRD1A-203ENST00000585879 HOXD8P13378 290 aaPredicted RBP9.13□□□□□ -0.95
RPRD1A-203ENST00000585879 PLD4Q96BZ4 506 aa9.13□□□□□ -0.95
RPRD1A-203ENST00000585879 MRPL18Q9H0U6 180 aaKnown RBP9.13□□□□□ -0.95
RPRD1A-203ENST00000585879 F8W735 103 aaPredicted RBP9.12□□□□□ -0.95
RPRD1A-203ENST00000585879 ALX3O95076 343 aa9.12□□□□□ -0.95
RPRD1A-203ENST00000585879 Q6ZS46 218 aa9.12□□□□□ -0.95
RPRD1A-203ENST00000585879 VRTNQ9H8Y1 702 aa9.12□□□□□ -0.95
RPRD1A-203ENST00000585879 LOC102724428A0A0B4J2F2 783 aa9.11□□□□□ -0.95
RPRD1A-203ENST00000585879 J3QW42 95 aa9.11□□□□□ -0.95
RPRD1A-203ENST00000585879 XYLBO75191 536 aa9.11□□□□□ -0.95
RPRD1A-203ENST00000585879 FSTP19883 344 aa9.11□□□□□ -0.95
RPRD1A-203ENST00000585879 SOX18P35713 384 aa9.11□□□□□ -0.95
RPRD1A-203ENST00000585879 SIK1P57059 783 aa9.11□□□□□ -0.95
RPRD1A-203ENST00000585879 SRA1Q9HD15 236 aaKnown RBP9.11□□□□□ -0.95
RPRD1A-203ENST00000585879 KCNMB2Q9Y691 235 aa9.11□□□□□ -0.95
RPRD1A-203ENST00000585879 SETDB1Q15047 1291 aa9.1□□□□□ -0.95
RPRD1A-203ENST00000585879 MCTP1Q6DN14 999 aa9.1□□□□□ -0.95
RPRD1A-203ENST00000585879 VTI1AQ96AJ9 217 aa9.1□□□□□ -0.95
RPRD1A-203ENST00000585879 MMP20O60882 483 aa9.09□□□□□ -0.95
RPRD1A-203ENST00000585879 PSAPP07602 524 aa9.09□□□□□ -0.95
RPRD1A-203ENST00000585879 TREML1Q86YW5 311 aa9.09□□□□□ -0.95
RPRD1A-203ENST00000585879 RGL4Q8IZJ4 473 aa9.09□□□□□ -0.95
RPRD1A-203ENST00000585879 IL22RA1Q8N6P7 574 aa9.09□□□□□ -0.95
RPRD1A-203ENST00000585879 CALR3Q96L12 384 aaKnown RBP9.09□□□□□ -0.95
RPRD1A-203ENST00000585879 KRTAP9-9Q9BYP9 154 aa9.09□□□□□ -0.95
RPRD1A-203ENST00000585879 KRTAP9-4Q9BYQ2 154 aa9.09□□□□□ -0.95
RPRD1A-203ENST00000585879 PRKCSHP14314 528 aaPredicted RBP9.08□□□□□ -0.96
RPRD1A-203ENST00000585879 LMOD1P29536 600 aaPredicted RBP9.08□□□□□ -0.96
RPRD1A-203ENST00000585879 CD97P48960 835 aa9.08□□□□□ -0.96
RPRD1A-203ENST00000585879 GDF6Q6KF10 455 aaPredicted RBP9.08□□□□□ -0.96
RPRD1A-203ENST00000585879 MAP4K3Q8IVH8 894 aa9.08□□□□□ -0.96
RPRD1A-203ENST00000585879 CMTR1Q8N1G2 835 aaKnown RBP9.08□□□□□ -0.96
RPRD1A-203ENST00000585879 NSUN5Q96P11 429 aaKnown RBP9.08□□□□□ -0.96
RPRD1A-203ENST00000585879 GOLGA2P5Q9HBQ8 144 aa9.08□□□□□ -0.96
RPRD1A-203ENST00000585879 PCMTD2Q9NV79 361 aa9.08□□□□□ -0.96
RPRD1A-203ENST00000585879 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.07□□□□□ -0.96
RPRD1A-203ENST00000585879 GHRHP01286 108 aa9.06□□□□□ -0.96
RPRD1A-203ENST00000585879 COX20Q5RI15 118 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms