RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 ABL1P00519 1130 aa8.22□□□□□ -1.09
SMAD4-203ENST00000585448 EPXP11678 715 aa8.22□□□□□ -1.09
SMAD4-203ENST00000585448 GRIN2CQ14957 1233 aa8.22□□□□□ -1.09
SMAD4-203ENST00000585448 XKR5Q6UX68 686 aa8.22□□□□□ -1.09
SMAD4-203ENST00000585448 SYT9Q86SS6 491 aa8.22□□□□□ -1.09
SMAD4-203ENST00000585448 FCHSD1Q86WN1 690 aa8.22□□□□□ -1.09
SMAD4-203ENST00000585448 RGL4Q8IZJ4 473 aa8.22□□□□□ -1.09
SMAD4-203ENST00000585448 ENAMQ9NRM1 1142 aa8.22□□□□□ -1.09
SMAD4-203ENST00000585448 FNDC3AQ9Y2H6 1198 aaKnown RBP8.22□□□□□ -1.09
SMAD4-203ENST00000585448 WASHC2CQ9Y4E1 1318 aa8.22□□□□□ -1.09
SMAD4-203ENST00000585448 A0A0U1RQG5 324 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-203ENST00000585448 FAM181BA6NEQ2 426 aa8.21□□□□□ -1.1
SMAD4-203ENST00000585448 SOWAHDA6NJG2 315 aa8.21□□□□□ -1.1
SMAD4-203ENST00000585448 H3BRB1 525 aa8.21□□□□□ -1.1
SMAD4-203ENST00000585448 XYLBO75191 536 aa8.21□□□□□ -1.1
SMAD4-203ENST00000585448 USP5P45974 858 aa8.21□□□□□ -1.1
SMAD4-203ENST00000585448 ARHGAP4P98171 946 aa8.21□□□□□ -1.1
SMAD4-203ENST00000585448 ZNF211Q13398 564 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-203ENST00000585448 MTMR3Q13615 1198 aa8.21□□□□□ -1.1
SMAD4-203ENST00000585448 PDE12Q6L8Q7 609 aaKnown RBP8.21□□□□□ -1.1
SMAD4-203ENST00000585448 WHAMMQ8TF30 809 aa8.21□□□□□ -1.1
SMAD4-203ENST00000585448 TUT1Q9H6E5 874 aaKnown RBP8.21□□□□□ -1.1
SMAD4-203ENST00000585448 STK17AQ9UEE5 414 aa8.21□□□□□ -1.1
SMAD4-203ENST00000585448 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.21□□□□□ -1.1
SMAD4-203ENST00000585448 ELOA3CA0A087WX78 387 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-203ENST00000585448 ELOA3DA6NLF2 546 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-203ENST00000585448 NEURL1BA8MQ27 555 aa8.2□□□□□ -1.1
SMAD4-203ENST00000585448 SOX18P35713 384 aa8.2□□□□□ -1.1
SMAD4-203ENST00000585448 MAP3K10Q02779 954 aa8.2□□□□□ -1.1
SMAD4-203ENST00000585448 TRIP4Q15650 581 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-203ENST00000585448 ELOA3BQ3SY89 546 aa8.2□□□□□ -1.1
SMAD4-203ENST00000585448 C1orf229Q6ZS94 237 aaPredicted RBP8.2□□□□□ -1.1
SMAD4-203ENST00000585448 GLYCTKQ8IVS8 523 aa8.2□□□□□ -1.1
SMAD4-203ENST00000585448 SVOPQ8N4V2 548 aa8.2□□□□□ -1.1
SMAD4-203ENST00000585448 ELOA3Q8NG57 546 aa8.2□□□□□ -1.1
SMAD4-203ENST00000585448 EDARADDQ8WWZ3 215 aa8.2□□□□□ -1.1
SMAD4-203ENST00000585448 WASHC2AQ641Q2 1341 aa8.2□□□□□ -1.1
SMAD4-203ENST00000585448 FZD6O60353 706 aa8.19□□□□□ -1.1
SMAD4-203ENST00000585448 PDGFAP04085 211 aa8.19□□□□□ -1.1
SMAD4-203ENST00000585448 PCSK2P16519 638 aa8.19□□□□□ -1.1
SMAD4-203ENST00000585448 EHHADHQ08426 723 aa8.19□□□□□ -1.1
SMAD4-203ENST00000585448 PCSK7Q16549 785 aa8.19□□□□□ -1.1
SMAD4-203ENST00000585448 NLRP13Q86W25 1043 aa8.19□□□□□ -1.1
SMAD4-203ENST00000585448 CMTR1Q8N1G2 835 aaKnown RBP8.19□□□□□ -1.1
SMAD4-203ENST00000585448 FAM43AQ8N2R8 423 aa8.19□□□□□ -1.1
SMAD4-203ENST00000585448 GPR152Q8TDT2 470 aa8.19□□□□□ -1.1
SMAD4-203ENST00000585448 NUDT16Q96DE0 195 aaKnown RBP8.19□□□□□ -1.1
SMAD4-203ENST00000585448 PNMA5Q96PV4 448 aa8.19□□□□□ -1.1
SMAD4-203ENST00000585448 CITED4Q96RK1 184 aa8.19□□□□□ -1.1
SMAD4-203ENST00000585448 PCBP4P57723 403 aaKnown RBP8.18□□□□□ -1.1
SMAD4-203ENST00000585448 KANK3Q6NY19 840 aa8.18□□□□□ -1.1
SMAD4-203ENST00000585448 ATCAYQ86WG3 371 aa8.18□□□□□ -1.1
SMAD4-203ENST00000585448 GJD3Q8N144 294 aa8.18□□□□□ -1.1
SMAD4-203ENST00000585448 GALNT6Q8NCL4 622 aa8.18□□□□□ -1.1
SMAD4-203ENST00000585448 EDEM1Q92611 657 aa8.18□□□□□ -1.1
SMAD4-203ENST00000585448 BHMTQ93088 406 aa8.18□□□□□ -1.1
SMAD4-203ENST00000585448 ZFATQ9P243 1243 aa8.18□□□□□ -1.1
SMAD4-203ENST00000585448 IVNS1ABPQ9Y6Y0 642 aa8.18□□□□□ -1.1
SMAD4-203ENST00000585448 UBAP1LF5GYI3 381 aa8.17□□□□□ -1.1
SMAD4-203ENST00000585448 NFKB1P19838 968 aa8.17□□□□□ -1.1
SMAD4-203ENST00000585448 NRLP54845 237 aa8.17□□□□□ -1.1
SMAD4-203ENST00000585448 TRPM4Q8TD43 1214 aa8.17□□□□□ -1.1
SMAD4-203ENST00000585448 ANO2Q9NQ90 1003 aa8.17□□□□□ -1.1
SMAD4-203ENST00000585448 USP20Q9Y2K6 914 aa8.17□□□□□ -1.1
SMAD4-203ENST00000585448 RARAP10276 462 aa8.16□□□□□ -1.1
SMAD4-203ENST00000585448 TLR7Q9NYK1 1049 aaKnown RBP8.16□□□□□ -1.1
SMAD4-203ENST00000585448 POLIQ9UNA4 740 aa8.16□□□□□ -1.1
SMAD4-203ENST00000585448 SHISA8B8ZZ34 492 aa8.15□□□□□ -1.1
SMAD4-203ENST00000585448 SASH3O75995 380 aa8.15□□□□□ -1.1
SMAD4-203ENST00000585448 TARSP26639 723 aaKnown RBP8.15□□□□□ -1.1
SMAD4-203ENST00000585448 GPLD1P80108 840 aa8.15□□□□□ -1.1
SMAD4-203ENST00000585448 DNM1Q05193 864 aaKnown RBP8.15□□□□□ -1.1
SMAD4-203ENST00000585448 DHX32Q7L7V1 743 aaKnown RBP8.15□□□□□ -1.1
SMAD4-203ENST00000585448 RAB44Q7Z6P3 723 aaPredicted RBP8.15□□□□□ -1.1
SMAD4-203ENST00000585448 OR13H1Q8NG92 308 aa8.15□□□□□ -1.1
SMAD4-203ENST00000585448 BTBD6Q96KE9 485 aa8.15□□□□□ -1.1
SMAD4-203ENST00000585448 PRDM6Q9NQX0 595 aa8.15□□□□□ -1.1
SMAD4-203ENST00000585448 HOXB4P17483 251 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-203ENST00000585448 ALAS2P22557 587 aa8.14□□□□□ -1.11
SMAD4-203ENST00000585448 ADH7P40394 386 aa8.14□□□□□ -1.11
SMAD4-203ENST00000585448 HSP90AA2PQ14568 343 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-203ENST00000585448 FAM129BQ96TA1 746 aa8.14□□□□□ -1.11
SMAD4-203ENST00000585448 RBCK1Q9BYM8 510 aa8.14□□□□□ -1.11
SMAD4-203ENST00000585448 ABI2Q9NYB9 513 aaPredicted RBP8.14□□□□□ -1.11
SMAD4-203ENST00000585448 NDUFB5O43674 189 aa8.13□□□□□ -1.11
SMAD4-203ENST00000585448 MMP20O60882 483 aa8.13□□□□□ -1.11
SMAD4-203ENST00000585448 PLAURQ03405 335 aa8.13□□□□□ -1.11
SMAD4-203ENST00000585448 CHSY3Q70JA7 882 aa8.13□□□□□ -1.11
SMAD4-203ENST00000585448 GGNBP2Q9H3C7 697 aa8.13□□□□□ -1.11
SMAD4-203ENST00000585448 CCDC87Q9NVE4 849 aa8.13□□□□□ -1.11
SMAD4-203ENST00000585448 DNAJB12Q9NXW2 375 aaKnown RBP8.13□□□□□ -1.11
SMAD4-203ENST00000585448 FRRS1LQ9P0K9 344 aa8.13□□□□□ -1.11
SMAD4-203ENST00000585448 BRPF3Q9ULD4 1205 aa8.13□□□□□ -1.11
SMAD4-203ENST00000585448 ADAMTS8Q9UP79 889 aa8.13□□□□□ -1.11
SMAD4-203ENST00000585448 IGHA2P01877 340 aa8.12□□□□□ -1.11
SMAD4-203ENST00000585448 PSAPP07602 524 aa8.12□□□□□ -1.11
SMAD4-203ENST00000585448 DGKGP49619 791 aa8.12□□□□□ -1.11
SMAD4-203ENST00000585448 PDE3BQ13370 1112 aa8.12□□□□□ -1.11
SMAD4-203ENST00000585448 TTC9Q92623 222 aa8.12□□□□□ -1.11
SMAD4-203ENST00000585448 UBE2OQ9C0C9 1292 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms