RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 FERMT3Q86UX7 667 aa16.87■□□□□ 0.29
CDK5RAP3-237ENST00000585163 FAM13BQ9NYF5 915 aa16.87■□□□□ 0.29
CDK5RAP3-237ENST00000585163 KDM6AO15550 1401 aaPredicted RBP16.87■□□□□ 0.29
CDK5RAP3-237ENST00000585163 SCN11AQ9UI33 1791 aa16.87■□□□□ 0.29
CDK5RAP3-237ENST00000585163 NPHP3Q7Z494 1330 aa16.87■□□□□ 0.29
CDK5RAP3-237ENST00000585163 ATP5JP18859 108 aa16.87■□□□□ 0.29
CDK5RAP3-237ENST00000585163 MYD88Q99836 296 aa16.87■□□□□ 0.29
CDK5RAP3-237ENST00000585163 AP5Z1O43299 807 aa16.86■□□□□ 0.29
CDK5RAP3-237ENST00000585163 SCAND2PQ9GZW5 306 aaPredicted RBP16.86■□□□□ 0.29
CDK5RAP3-237ENST00000585163 TAF7LQ5H9L4 462 aa16.86■□□□□ 0.29
CDK5RAP3-237ENST00000585163 FAM173BQ6P4H8 233 aa16.86■□□□□ 0.29
CDK5RAP3-237ENST00000585163 DBNLQ9UJU6 430 aaKnown RBP16.86■□□□□ 0.29
CDK5RAP3-237ENST00000585163 RFX5P48382 616 aaPredicted RBP16.85■□□□□ 0.29
CDK5RAP3-237ENST00000585163 KRT32Q14532 448 aa16.85■□□□□ 0.29
CDK5RAP3-237ENST00000585163 ANKRD13DQ6ZTN6 518 aa16.85■□□□□ 0.29
CDK5RAP3-237ENST00000585163 KRT28Q7Z3Y7 464 aa16.85■□□□□ 0.29
CDK5RAP3-237ENST00000585163 LRP10Q7Z4F1 713 aa16.85■□□□□ 0.29
CDK5RAP3-237ENST00000585163 VSIG10Q8N0Z9 540 aa16.85■□□□□ 0.29
CDK5RAP3-237ENST00000585163 NFATC2IPQ8NCF5 419 aa16.85■□□□□ 0.29
CDK5RAP3-237ENST00000585163 RAPGEF4Q8WZA2 1011 aa16.85■□□□□ 0.29
CDK5RAP3-237ENST00000585163 EDC3Q96F86 508 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-237ENST00000585163 SPTLC3Q9NUV7 552 aa16.85■□□□□ 0.29
CDK5RAP3-237ENST00000585163 PTPN12Q05209 780 aaKnown RBP16.85■□□□□ 0.29
CDK5RAP3-237ENST00000585163 MAP3K11Q16584 847 aa16.85■□□□□ 0.29
CDK5RAP3-237ENST00000585163 TNNI3KQ59H18 835 aa16.85■□□□□ 0.29
CDK5RAP3-237ENST00000585163 NUP62CLQ9H1M0 184 aa16.85■□□□□ 0.29
CDK5RAP3-237ENST00000585163 FPGT-TNNI3KV9GXZ4 949 aa16.85■□□□□ 0.29
CDK5RAP3-237ENST00000585163 COL15A1P39059 1388 aa16.84■□□□□ 0.29
CDK5RAP3-237ENST00000585163 PHKG2P15735 406 aa16.84■□□□□ 0.29
CDK5RAP3-237ENST00000585163 LIG1P18858 919 aa16.84■□□□□ 0.29
CDK5RAP3-237ENST00000585163 PLCB2Q00722 1185 aa16.84■□□□□ 0.29
CDK5RAP3-237ENST00000585163 DNTTIP2Q5QJE6 756 aaKnown RBP16.84■□□□□ 0.29
CDK5RAP3-237ENST00000585163 ZNF496Q96IT1 587 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-237ENST00000585163 MST1RQ04912 1400 aa16.84■□□□□ 0.29
CDK5RAP3-237ENST00000585163 RFX7Q2KHR2 1363 aa16.84■□□□□ 0.29
CDK5RAP3-237ENST00000585163 RABL6Q3YEC7 729 aaPredicted RBP16.84■□□□□ 0.29
CDK5RAP3-237ENST00000585163 MYRIPQ8NFW9 859 aa16.84■□□□□ 0.29
CDK5RAP3-237ENST00000585163 FAM200AQ8TCP9 573 aa16.84■□□□□ 0.29
CDK5RAP3-237ENST00000585163 PRIMPOLQ96LW4 560 aa16.84■□□□□ 0.29
CDK5RAP3-237ENST00000585163 TPM3P06753 285 aa16.83■□□□□ 0.28
CDK5RAP3-237ENST00000585163 TFCP2Q12800 502 aa16.83■□□□□ 0.28
CDK5RAP3-237ENST00000585163 MTERF4Q7Z6M4 381 aaKnown RBP16.83■□□□□ 0.28
CDK5RAP3-237ENST00000585163 SPATA32Q96LK8 384 aa16.83■□□□□ 0.28
CDK5RAP3-237ENST00000585163 ZC3H6P61129 1189 aaKnown RBP16.82■□□□□ 0.28
CDK5RAP3-237ENST00000585163 STK3Q13188 491 aa16.82■□□□□ 0.28
CDK5RAP3-237ENST00000585163 LEO1Q8WVC0 666 aaPredicted RBP16.82■□□□□ 0.28
CDK5RAP3-237ENST00000585163 GTF3C6Q969F1 213 aa16.82■□□□□ 0.28
CDK5RAP3-237ENST00000585163 NEK1Q96PY6 1258 aa16.82■□□□□ 0.28
CDK5RAP3-237ENST00000585163 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.82■□□□□ 0.288e-10■□□□□ 11
CDK5RAP3-237ENST00000585163 CHMP3Q9Y3E7 222 aa16.82■□□□□ 0.28
CDK5RAP3-237ENST00000585163 MRVI1Q9Y6F6 885 aa16.82■□□□□ 0.28
CDK5RAP3-237ENST00000585163 SNRPA1P09661 255 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-237ENST00000585163 TYRO3Q06418 890 aa16.81■□□□□ 0.28
CDK5RAP3-237ENST00000585163 CAMK4Q16566 473 aa16.81■□□□□ 0.28
CDK5RAP3-237ENST00000585163 DACT1Q9NYF0 836 aa16.81■□□□□ 0.28
CDK5RAP3-237ENST00000585163 USP16Q9Y5T5 823 aa16.81■□□□□ 0.28
CDK5RAP3-237ENST00000585163 TATP17735 454 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP3-237ENST00000585163 HMGN5P82970 282 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-237ENST00000585163 RBM43Q6ZSC3 357 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-237ENST00000585163 C17orf53Q8N3J3 647 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP3-237ENST00000585163 NLRP2Q9NX02 1062 aa16.81■□□□□ 0.28
CDK5RAP3-237ENST00000585163 TFIP11Q9UBB9 837 aaKnown RBP16.81■□□□□ 0.28
CDK5RAP3-237ENST00000585163 U3KPZ7 1027 aaPredicted RBP16.81■□□□□ 0.28
CDK5RAP3-237ENST00000585163 ZNF609O15014 1411 aa16.81■□□□□ 0.28
CDK5RAP3-237ENST00000585163 GOLGA6L4A6NEF3 574 aa16.8■□□□□ 0.28
CDK5RAP3-237ENST00000585163 UBE3BQ7Z3V4 1068 aa16.8■□□□□ 0.28
CDK5RAP3-237ENST00000585163 KIAA1524Q8TCG1 905 aa16.8■□□□□ 0.28
CDK5RAP3-237ENST00000585163 TNMDQ9H2S6 317 aa16.8■□□□□ 0.28
CDK5RAP3-237ENST00000585163 DDX19AQ9NUU7 478 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-237ENST00000585163 KIF1AQ12756 1690 aa16.8■□□□□ 0.28
CDK5RAP3-237ENST00000585163 IFNL2Q8IZJ0 200 aa16.8■□□□□ 0.28
CDK5RAP3-237ENST00000585163 JARID2Q92833 1246 aaPredicted RBP16.8■□□□□ 0.28
CDK5RAP3-237ENST00000585163 HAUS7Q99871 368 aa16.8■□□□□ 0.28
CDK5RAP3-237ENST00000585163 KCNF1Q9H3M0 494 aa16.8■□□□□ 0.28
CDK5RAP3-237ENST00000585163 AFDNP55196 1824 aaKnown RBP16.8■□□□□ 0.28
CDK5RAP3-237ENST00000585163 MCMDC2Q4G0Z9 681 aa16.79■□□□□ 0.28
CDK5RAP3-237ENST00000585163 NDUFB9Q9Y6M9 179 aa16.79■□□□□ 0.28
CDK5RAP3-237ENST00000585163 MEGF6O75095 1541 aa16.79■□□□□ 0.28
CDK5RAP3-237ENST00000585163 GOLGA6L6A8MZA4 724 aa16.79■□□□□ 0.28
CDK5RAP3-237ENST00000585163 JAK2O60674 1132 aa16.79■□□□□ 0.28
CDK5RAP3-237ENST00000585163 CYP21A2P08686 494 aa16.79■□□□□ 0.28
CDK5RAP3-237ENST00000585163 DBNDD2Q9BQY9 259 aa16.79■□□□□ 0.28
CDK5RAP3-237ENST00000585163 ALS2Q96Q42 1657 aa16.79■□□□□ 0.28
CDK5RAP3-237ENST00000585163 C1orf167Q5SNV9 1468 aa16.79■□□□□ 0.28
CDK5RAP3-237ENST00000585163 GTF2F1P35269 517 aaKnown RBP eCLIP16.78■□□□□ 0.28
CDK5RAP3-237ENST00000585163 Q6ZUG5 572 aa16.78■□□□□ 0.28
CDK5RAP3-237ENST00000585163 TTC5Q8N0Z6 440 aa16.78■□□□□ 0.28
CDK5RAP3-237ENST00000585163 SEC62Q99442 399 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-237ENST00000585163 DNAJC2Q99543 621 aaKnown RBP16.78■□□□□ 0.28
CDK5RAP3-237ENST00000585163 CLSTN2Q9H4D0 955 aa16.78■□□□□ 0.28
CDK5RAP3-237ENST00000585163 ABCC6O95255 1503 aa16.78■□□□□ 0.28
CDK5RAP3-237ENST00000585163 CHGBP05060 677 aa16.78■□□□□ 0.28
CDK5RAP3-237ENST00000585163 PIP4K2AP48426 406 aaPredicted RBP16.78■□□□□ 0.28
CDK5RAP3-237ENST00000585163 CCDC129Q6ZRS4 1044 aa16.78■□□□□ 0.28
CDK5RAP3-237ENST00000585163 CKAP2LQ8IYA6 745 aa16.78■□□□□ 0.28
CDK5RAP3-237ENST00000585163 DCAF5Q96JK2 942 aa16.78■□□□□ 0.28
CDK5RAP3-237ENST00000585163 ARFGEF2Q9Y6D5 1785 aa16.78■□□□□ 0.28
CDK5RAP3-237ENST00000585163 A0A087WZG4 1122 aa16.77■□□□□ 0.28
CDK5RAP3-237ENST00000585163 CASP7P55210 303 aa16.77■□□□□ 0.28
CDK5RAP3-237ENST00000585163 RESTQ13127 1097 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 170.1 ms