RNA–Protein interactions for RNA: ENST00000583380.5

SKA2-207, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 5 BASIC

Gene SKA2, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-207ENST00000583380 PTCH1Q13635 1447 aa10.88□□□□□ -0.67
SKA2-207ENST00000583380 E2F4Q16254 413 aa10.88□□□□□ -0.67
SKA2-207ENST00000583380 ANKRD23Q86SG2 305 aa10.88□□□□□ -0.67
SKA2-207ENST00000583380 KLHL23Q8NBE8 558 aa10.88□□□□□ -0.67
SKA2-207ENST00000583380 BPIFA3Q9BQP9 254 aa10.88□□□□□ -0.67
SKA2-207ENST00000583380 DNAJC5BQ9UF47 199 aa10.88□□□□□ -0.67
SKA2-207ENST00000583380 RAB21Q9UL25 225 aa10.88□□□□□ -0.67
SKA2-207ENST00000583380 SMC3Q9UQE7 1217 aa10.88□□□□□ -0.67
SKA2-207ENST00000583380 TRAPPC8Q9Y2L5 1435 aa10.88□□□□□ -0.67
SKA2-207ENST00000583380 AOX1Q06278 1338 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 ZNF644Q9H582 1327 aaPredicted RBP10.87□□□□□ -0.67
SKA2-207ENST00000583380 NEURL4Q96JN8 1562 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 BICRAQ9NZM4 1560 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 GOLGA6L10A6NI86 522 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 IRF6O14896 467 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 CBFA2T2O43439 604 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 GADD45BO75293 160 aaPredicted RBP10.87□□□□□ -0.67
SKA2-207ENST00000583380 NEBLO76041 1014 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 FSBPO95073 299 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 TSPY4P0CV99 314 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 TSPY10P0CW01 314 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 AARSP49588 968 aaKnown RBP eCLIP10.87□□□□□ -0.67
SKA2-207ENST00000583380 CCZ1BP86790 482 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 CCZ1P86791 482 aaPredicted RBP10.87□□□□□ -0.67
SKA2-207ENST00000583380 LONRF2Q1L5Z9 754 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 GIMAP6Q6P9H5 292 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 TMED8Q6PL24 325 aaPredicted RBP10.87□□□□□ -0.67
SKA2-207ENST00000583380 CCDC170Q8IYT3 715 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 CCDC26Q8TAB7 109 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 RUBCNQ92622 972 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 P3H4Q92791 437 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 ANKRD27Q96NW4 1050 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 MOV10L1Q9BXT6 1211 aaKnown RBP10.87□□□□□ -0.67
SKA2-207ENST00000583380 ST7Q9NRC1 585 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 PDRG1Q9NUG6 133 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 CFDP1Q9UEE9 299 aaPredicted RBP10.87□□□□□ -0.67
SKA2-207ENST00000583380 ODF2LQ9ULJ1 636 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 NOB1Q9ULX3 412 aaKnown RBP10.87□□□□□ -0.67
SKA2-207ENST00000583380 LIMCH1Q9UPQ0 1083 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 FANCAO15360 1455 aa10.87□□□□□ -0.67
SKA2-207ENST00000583380 DUOX2Q9NRD8 1548 aa10.86□□□□□ -0.67
SKA2-207ENST00000583380 ZBTB7CA1YPR0 619 aa10.86□□□□□ -0.67
SKA2-207ENST00000583380 LIN7AO14910 233 aaPredicted RBP10.86□□□□□ -0.67
SKA2-207ENST00000583380 SHOX2O60902 331 aaPredicted RBP10.86□□□□□ -0.67
SKA2-207ENST00000583380 LRMPQ12912 555 aa10.86□□□□□ -0.67
SKA2-207ENST00000583380 NAA30Q147X3 362 aaPredicted RBP10.86□□□□□ -0.67
SKA2-207ENST00000583380 RSRC2Q7L4I2 434 aaKnown RBP10.86□□□□□ -0.67
SKA2-207ENST00000583380 CEP57L1Q8IYX8 460 aa10.86□□□□□ -0.67
SKA2-207ENST00000583380 MIPOL1Q8TD10 442 aa10.86□□□□□ -0.67
SKA2-207ENST00000583380 SSH1Q8WYL5 1049 aa10.86□□□□□ -0.67
SKA2-207ENST00000583380 DTNBP1Q96EV8 351 aa10.86□□□□□ -0.67
SKA2-207ENST00000583380 FAXDC2Q96IV6 333 aa10.86□□□□□ -0.67
SKA2-207ENST00000583380 RSRC1Q96IZ7 334 aaKnown RBP10.86□□□□□ -0.67
SKA2-207ENST00000583380 PPP1R13BQ96KQ4 1090 aa10.86□□□□□ -0.67
SKA2-207ENST00000583380 VPS18Q9P253 973 aa10.86□□□□□ -0.67
SKA2-207ENST00000583380 TAOK2Q9UL54 1235 aa10.86□□□□□ -0.67
SKA2-207ENST00000583380 ADCY10Q96PN6 1610 aa10.86□□□□□ -0.67
SKA2-207ENST00000583380 A2MP01023 1474 aa10.86□□□□□ -0.67
SKA2-207ENST00000583380 ERBB3P21860 1342 aa10.85□□□□□ -0.67
SKA2-207ENST00000583380 TROQ12816 1431 aaPredicted RBP10.85□□□□□ -0.67
SKA2-207ENST00000583380 EFCAB6Q5THR3 1501 aa10.85□□□□□ -0.67
SKA2-207ENST00000583380 SNUPNO95149 360 aaKnown RBP10.85□□□□□ -0.67
SKA2-207ENST00000583380 PIP4K2BP78356 416 aa10.85□□□□□ -0.67
SKA2-207ENST00000583380 MAP3K9P80192 1104 aa10.85□□□□□ -0.67
SKA2-207ENST00000583380 TMED1Q13445 227 aa10.85□□□□□ -0.67
SKA2-207ENST00000583380 ANO6Q4KMQ2 910 aa10.85□□□□□ -0.67
SKA2-207ENST00000583380 MAB21L3Q8N8X9 362 aa10.85□□□□□ -0.67
SKA2-207ENST00000583380 C3orf20Q8ND61 904 aa10.85□□□□□ -0.67
SKA2-207ENST00000583380 AFAP1L1Q8TED9 768 aa10.85□□□□□ -0.67
SKA2-207ENST00000583380 TATDN2Q93075 761 aa10.85□□□□□ -0.67
SKA2-207ENST00000583380 HOOK2Q96ED9 719 aa10.85□□□□□ -0.67
SKA2-207ENST00000583380 CALR3Q96L12 384 aaKnown RBP10.85□□□□□ -0.67
SKA2-207ENST00000583380 PAGR1Q9BTK6 254 aa10.85□□□□□ -0.67
SKA2-207ENST00000583380 ACTR5Q9H9F9 607 aaPredicted RBP10.85□□□□□ -0.67
SKA2-207ENST00000583380 CHCHD3Q9NX63 227 aaKnown RBP10.85□□□□□ -0.67
SKA2-207ENST00000583380 ARHGEF5Q12774 1597 aa10.85□□□□□ -0.67
SKA2-207ENST00000583380 RPGRIP1LQ68CZ1 1315 aa10.84□□□□□ -0.67
SKA2-207ENST00000583380 ZEB2O60315 1214 aa10.84□□□□□ -0.67
SKA2-207ENST00000583380 PECAM1P16284 738 aaPredicted RBP10.84□□□□□ -0.67
SKA2-207ENST00000583380 SMTNP53814 917 aa10.84□□□□□ -0.67
SKA2-207ENST00000583380 SH3BGRP55822 239 aaPredicted RBP10.84□□□□□ -0.67
SKA2-207ENST00000583380 MLECQ14165 292 aa10.84□□□□□ -0.67
SKA2-207ENST00000583380 ZC3H12AQ5D1E8 599 aaKnown RBP10.84□□□□□ -0.67
SKA2-207ENST00000583380 LRRC31Q6UY01 552 aa10.84□□□□□ -0.67
SKA2-207ENST00000583380 EP400NLQ6ZTU2 488 aa10.84□□□□□ -0.67
SKA2-207ENST00000583380 RPUSD2Q8IZ73 545 aaKnown RBP10.84□□□□□ -0.67
SKA2-207ENST00000583380 MSANTD4Q8NCY6 345 aa10.84□□□□□ -0.67
SKA2-207ENST00000583380 CCHCR1Q8TD31 782 aa10.84□□□□□ -0.67
SKA2-207ENST00000583380 SAAL1Q96ER3 474 aa10.84□□□□□ -0.67
SKA2-207ENST00000583380 OSBPL9Q96SU4 736 aa10.84□□□□□ -0.67
SKA2-207ENST00000583380 ATP6V0A4Q9HBG4 840 aa10.84□□□□□ -0.67
SKA2-207ENST00000583380 CFAP45Q9UL16 551 aa10.84□□□□□ -0.67
SKA2-207ENST00000583380 ZNF518AQ6AHZ1 1483 aa10.84□□□□□ -0.67
SKA2-207ENST00000583380 RAD54L2Q9Y4B4 1467 aa10.84□□□□□ -0.67
SKA2-207ENST00000583380 PPRC1Q5VV67 1664 aaKnown RBP10.84□□□□□ -0.67
SKA2-207ENST00000583380 YTHDC2Q9H6S0 1430 aaKnown RBP10.84□□□□□ -0.67
SKA2-207ENST00000583380 AP5Z1O43299 807 aa10.83□□□□□ -0.68
SKA2-207ENST00000583380 PPFIA2O75334 1257 aa10.83□□□□□ -0.68
SKA2-207ENST00000583380 GSPT1P15170 499 aaKnown RBP10.83□□□□□ -0.68
SKA2-207ENST00000583380 SDSP20132 328 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms