RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 PTGER2P43116 358 aa17.06■□□□□ 0.32
ITGB4-209ENST00000583327 CRY2Q49AN0 593 aa17.06■□□□□ 0.32
ITGB4-209ENST00000583327 NLRP3Q96P20 1036 aa17.06■□□□□ 0.32
ITGB4-209ENST00000583327 ST5P78524 1137 aa17.05■□□□□ 0.32
ITGB4-209ENST00000583327 CCDC24Q8N4L8 307 aa17.05■□□□□ 0.32
ITGB4-209ENST00000583327 ATF5Q9Y2D1 282 aaPredicted RBP17.05■□□□□ 0.32
ITGB4-209ENST00000583327 NOP58Q9Y2X3 529 aaKnown RBP17.05■□□□□ 0.32
ITGB4-209ENST00000583327 SRGAP3O43295 1099 aa17.04■□□□□ 0.32
ITGB4-209ENST00000583327 PTPN12Q05209 780 aaKnown RBP17.04■□□□□ 0.32
ITGB4-209ENST00000583327 RWDD1Q9H446 243 aaPredicted RBP17.04■□□□□ 0.32
ITGB4-209ENST00000583327 DCTPP1Q9H773 170 aa17.04■□□□□ 0.32
ITGB4-209ENST00000583327 COPRSQ9NQ92 184 aa17.04■□□□□ 0.32
ITGB4-209ENST00000583327 KDM2BQ8NHM5 1336 aa17.03■□□□□ 0.32
ITGB4-209ENST00000583327 HMMRO75330 724 aa17.03■□□□□ 0.32
ITGB4-209ENST00000583327 HOXA10P31260 410 aaPredicted RBP17.03■□□□□ 0.32
ITGB4-209ENST00000583327 CCDC152Q4G0S7 254 aa17.03■□□□□ 0.32
ITGB4-209ENST00000583327 GREM2Q9H772 168 aa17.03■□□□□ 0.32
ITGB4-209ENST00000583327 TNRC6CQ9HCJ0 1690 aaKnown RBP17.02■□□□□ 0.32
ITGB4-209ENST00000583327 FAM161AQ3B820 660 aa17.02■□□□□ 0.32
ITGB4-209ENST00000583327 SMC5Q8IY18 1101 aa17.02■□□□□ 0.32
ITGB4-209ENST00000583327 C10orf71Q711Q0 1435 aa17.02■□□□□ 0.31
ITGB4-209ENST00000583327 ANKRD31Q8N7Z5 1873 aa17.01■□□□□ 0.31
ITGB4-209ENST00000583327 ITGA6P23229 1130 aa17.01■□□□□ 0.31
ITGB4-209ENST00000583327 POLD1P28340 1107 aa17.01■□□□□ 0.31
ITGB4-209ENST00000583327 PDE6BP35913 854 aa17.01■□□□□ 0.31
ITGB4-209ENST00000583327 CCDC136Q96JN2 1154 aa17.01■□□□□ 0.31
ITGB4-209ENST00000583327 FBXO3Q9UK99 471 aa17.01■□□□□ 0.31
ITGB4-209ENST00000583327 PDZRN3Q9UPQ7 1066 aa17.01■□□□□ 0.31
ITGB4-209ENST00000583327 MYH3P11055 1940 aa17■□□□□ 0.31
ITGB4-209ENST00000583327 SRGNP10124 158 aa17■□□□□ 0.31
ITGB4-209ENST00000583327 IFIT5Q13325 482 aaKnown RBP17■□□□□ 0.31
ITGB4-209ENST00000583327 CCDC57Q2TAC2 916 aa17■□□□□ 0.31
ITGB4-209ENST00000583327 B4GALNT3Q6L9W6 998 aa17■□□□□ 0.31
ITGB4-209ENST00000583327 SPON1Q9HCB6 807 aa17■□□□□ 0.31
ITGB4-209ENST00000583327 SEC31BQ9NQW1 1179 aa17■□□□□ 0.31
ITGB4-209ENST00000583327 ANKRD18BA2A2Z9 1011 aa16.99■□□□□ 0.31
ITGB4-209ENST00000583327 NPHP1O15259 732 aa16.99■□□□□ 0.31
ITGB4-209ENST00000583327 GCC1Q96CN9 775 aa16.99■□□□□ 0.31
ITGB4-209ENST00000583327 CRAMP1Q96RY5 1269 aa16.99■□□□□ 0.31
ITGB4-209ENST00000583327 ATG9AQ7Z3C6 839 aa16.98■□□□□ 0.31
ITGB4-209ENST00000583327 KLHDC4Q8TBB5 520 aa16.98■□□□□ 0.31
ITGB4-209ENST00000583327 CCDC85AQ96PX6 553 aaPredicted RBP16.98■□□□□ 0.31
ITGB4-209ENST00000583327 PA2G4Q9UQ80 394 aaKnown RBP16.98■□□□□ 0.31
ITGB4-209ENST00000583327 RIPOR2Q9Y4F9 1068 aa16.98■□□□□ 0.31
ITGB4-209ENST00000583327 KIF13BQ9NQT8 1826 aa16.98■□□□□ 0.31
ITGB4-209ENST00000583327 COL4A1P02462 1669 aa16.97■□□□□ 0.31
ITGB4-209ENST00000583327 CIAO1O76071 339 aa16.97■□□□□ 0.31
ITGB4-209ENST00000583327 KCNA3P22001 575 aa16.97■□□□□ 0.31
ITGB4-209ENST00000583327 CENPQQ7L2Z9 268 aaPredicted RBP16.97■□□□□ 0.31
ITGB4-209ENST00000583327 ZNF594Q96JF6 807 aaPredicted RBP16.97■□□□□ 0.31
ITGB4-209ENST00000583327 CHMP3Q9Y3E7 222 aa16.97■□□□□ 0.31
ITGB4-209ENST00000583327 CD2APQ9Y5K6 639 aa16.97■□□□□ 0.31
ITGB4-209ENST00000583327 EYA2O00167 538 aa16.96■□□□□ 0.31
ITGB4-209ENST00000583327 RAB11FIP3O75154 756 aa16.96■□□□□ 0.31
ITGB4-209ENST00000583327 SURF6O75683 361 aaKnown RBP16.96■□□□□ 0.31
ITGB4-209ENST00000583327 SASH1O94885 1247 aa16.96■□□□□ 0.31
ITGB4-209ENST00000583327 NPR1P16066 1061 aa16.96■□□□□ 0.31
ITGB4-209ENST00000583327 TGFB2P61812 414 aa16.96■□□□□ 0.31
ITGB4-209ENST00000583327 RPS8P62241 208 aaKnown RBP16.96■□□□□ 0.31
ITGB4-209ENST00000583327 HSP90AB4PQ58FF6 505 aa16.96■□□□□ 0.31
ITGB4-209ENST00000583327 DDX46Q7L014 1031 aaKnown RBP16.96■□□□□ 0.31
ITGB4-209ENST00000583327 CELF1Q92879 486 aaKnown RBP16.96■□□□□ 0.31
ITGB4-209ENST00000583327 MASTLQ96GX5 879 aa16.96■□□□□ 0.31
ITGB4-209ENST00000583327 CDC5LQ99459 802 aaKnown RBP16.96■□□□□ 0.31
ITGB4-209ENST00000583327 LRP5O75197 1615 aa16.96■□□□□ 0.3
ITGB4-209ENST00000583327 GRAPQ13588 217 aa16.95■□□□□ 0.3
ITGB4-209ENST00000583327 STYK1Q6J9G0 422 aa16.95■□□□□ 0.3
ITGB4-209ENST00000583327 GRAPLQ8TC17 118 aaPredicted RBP16.95■□□□□ 0.3
ITGB4-209ENST00000583327 RBM17Q96I25 401 aaKnown RBP16.95■□□□□ 0.3
ITGB4-209ENST00000583327 PUS3Q9BZE2 481 aaKnown RBP16.95■□□□□ 0.3
ITGB4-209ENST00000583327 BSDC1Q9NW68 430 aaPredicted RBP16.95■□□□□ 0.3
ITGB4-209ENST00000583327 H0YIN7 160 aa16.94■□□□□ 0.3
ITGB4-209ENST00000583327 BBOX1O75936 387 aa16.94■□□□□ 0.3
ITGB4-209ENST00000583327 LRRC24Q50LG9 513 aa16.94■□□□□ 0.3
ITGB4-209ENST00000583327 LDHAL6AQ6ZMR3 332 aa16.94■□□□□ 0.3
ITGB4-209ENST00000583327 C2CD5Q86YS7 1000 aa16.94■□□□□ 0.3
ITGB4-209ENST00000583327 RPGRQ92834 1020 aaKnown RBP16.94■□□□□ 0.3
ITGB4-209ENST00000583327 EXOC6BQ9Y2D4 811 aa16.94■□□□□ 0.3
ITGB4-209ENST00000583327 KIAA1551Q9HCM1 1747 aa16.93■□□□□ 0.3
ITGB4-209ENST00000583327 ALDH1B1P30837 517 aa16.93■□□□□ 0.3
ITGB4-209ENST00000583327 IL15P40933 162 aaPredicted RBP16.93■□□□□ 0.3
ITGB4-209ENST00000583327 NUCB1Q02818 461 aa16.93■□□□□ 0.3
ITGB4-209ENST00000583327 G3BP1Q13283 466 aaKnown RBP eCLIP16.93■□□□□ 0.3
ITGB4-209ENST00000583327 ANKRD18AQ8IVF6 992 aa16.93■□□□□ 0.3
ITGB4-209ENST00000583327 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.93■□□□□ 0.3
ITGB4-209ENST00000583327 COL11A2P13942 1736 aaPredicted RBP16.93■□□□□ 0.3
ITGB4-209ENST00000583327 CHRNA5P30532 468 aa16.92■□□□□ 0.3
ITGB4-209ENST00000583327 IGHMBP2P38935 993 aaKnown RBP16.92■□□□□ 0.3
ITGB4-209ENST00000583327 VGLL2Q8N8G2 317 aa16.92■□□□□ 0.3
ITGB4-209ENST00000583327 RHPN1Q8TCX5 695 aa16.92■□□□□ 0.3
ITGB4-209ENST00000583327 KIF1BPQ96EK5 621 aa16.92■□□□□ 0.3
ITGB4-209ENST00000583327 DPEP1P16444 411 aa16.91■□□□□ 0.3
ITGB4-209ENST00000583327 TAF7LQ5H9L4 462 aa16.91■□□□□ 0.3
ITGB4-209ENST00000583327 TMC4Q7Z404 712 aa16.91■□□□□ 0.3
ITGB4-209ENST00000583327 ERC1Q8IUD2 1116 aa16.91■□□□□ 0.3
ITGB4-209ENST00000583327 MPHOSPH8Q99549 860 aa16.91■□□□□ 0.3
ITGB4-209ENST00000583327 SIL1Q9H173 461 aa16.91■□□□□ 0.3
ITGB4-209ENST00000583327 MINPP1Q9UNW1 487 aa16.91■□□□□ 0.3
ITGB4-209ENST00000583327 C7orf43Q8WVR3 580 aa16.9■□□□□ 0.3
ITGB4-209ENST00000583327 CNKSR1Q969H4 720 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms