RNA–Protein interactions for RNA: ENST00000583311.1

MIR3960-201, Transcript of microRNA 3960, humanhuman

BASIC

Gene MIR3960, Length 91 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3960-201ENST00000583311 BBOX1O75936 387 aa30.84■■■□□ 2.53
MIR3960-201ENST00000583311 GRAPQ13588 217 aa30.84■■■□□ 2.53
MIR3960-201ENST00000583311 INTS3Q68E01 1043 aaKnown RBP30.84■■■□□ 2.53
MIR3960-201ENST00000583311 ARHGAP27Q6ZUM4 889 aa30.84■■■□□ 2.53
MIR3960-201ENST00000583311 GRAPLQ8TC17 118 aaPredicted RBP30.84■■■□□ 2.53
MIR3960-201ENST00000583311 TMX4Q9H1E5 349 aaPredicted RBP30.84■■■□□ 2.53
MIR3960-201ENST00000583311 SLX4Q8IY92 1834 aa30.84■■■□□ 2.53
MIR3960-201ENST00000583311 PPEF1O14829 653 aaPredicted RBP30.83■■■□□ 2.53
MIR3960-201ENST00000583311 FTSJ3Q8IY81 847 aaKnown RBP30.83■■■□□ 2.53
MIR3960-201ENST00000583311 ZNF219Q9P2Y4 722 aaPredicted RBP30.83■■■□□ 2.53
MIR3960-201ENST00000583311 MYH3P11055 1940 aa30.83■■■□□ 2.53
MIR3960-201ENST00000583311 MS4A1P11836 297 aa30.82■■■□□ 2.52
MIR3960-201ENST00000583311 CC2D2BQ6DHV5 1058 aa30.82■■■□□ 2.52
MIR3960-201ENST00000583311 TMC4Q7Z404 712 aa30.82■■■□□ 2.52
MIR3960-201ENST00000583311 TTLL11Q8NHH1 800 aa30.82■■■□□ 2.52
MIR3960-201ENST00000583311 CCDC93Q567U6 631 aa30.81■■■□□ 2.52
MIR3960-201ENST00000583311 CLUAP1Q96AJ1 413 aa30.81■■■□□ 2.52
MIR3960-201ENST00000583311 HDAC5Q9UQL6 1122 aa30.81■■■□□ 2.52
MIR3960-201ENST00000583311 RTL9Q8NET4 1388 aa30.8■■■□□ 2.52
MIR3960-201ENST00000583311 NBPF7P0C2Y1 421 aaPredicted RBP30.8■■■□□ 2.52
MIR3960-201ENST00000583311 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.8■■■□□ 2.52
MIR3960-201ENST00000583311 C7orf43Q8WVR3 580 aa30.8■■■□□ 2.52
MIR3960-201ENST00000583311 USP44Q9H0E7 712 aa30.8■■■□□ 2.52
MIR3960-201ENST00000583311 GRIPAP1Q4V328 841 aa30.79■■■□□ 2.52
MIR3960-201ENST00000583311 DZIP1LQ8IYY4 767 aaKnown RBP30.79■■■□□ 2.52
MIR3960-201ENST00000583311 CSF1RP07333 972 aa30.78■■■□□ 2.52
MIR3960-201ENST00000583311 CCDC85AQ96PX6 553 aaPredicted RBP30.78■■■□□ 2.52
MIR3960-201ENST00000583311 CDC5LQ99459 802 aaKnown RBP30.78■■■□□ 2.52
MIR3960-201ENST00000583311 RTKN2Q8IZC4 609 aa30.77■■■□□ 2.52
MIR3960-201ENST00000583311 ATP6V0A2Q9Y487 856 aa30.77■■■□□ 2.52
MIR3960-201ENST00000583311 UBTFL1P0CB47 393 aaPredicted RBP30.76■■■□□ 2.51
MIR3960-201ENST00000583311 RPS8P62241 208 aaKnown RBP30.76■■■□□ 2.51
MIR3960-201ENST00000583311 FOXO4P98177 505 aa30.76■■■□□ 2.51
MIR3960-201ENST00000583311 SUCLG2Q96I99 432 aa30.76■■■□□ 2.51
MIR3960-201ENST00000583311 GREM2Q9H772 168 aa30.76■■■□□ 2.51
MIR3960-201ENST00000583311 TNNQ9UQP3 1299 aa30.76■■■□□ 2.51
MIR3960-201ENST00000583311 SP8Q8IXZ3 490 aa30.75■■■□□ 2.51
MIR3960-201ENST00000583311 CELF1Q92879 486 aaKnown RBP30.75■■■□□ 2.51
MIR3960-201ENST00000583311 SEC31BQ9NQW1 1179 aa30.75■■■□□ 2.51
MIR3960-201ENST00000583311 GNAI3P08754 354 aa30.74■■■□□ 2.51
MIR3960-201ENST00000583311 ANKRD18AQ8IVF6 992 aa30.74■■■□□ 2.51
MIR3960-201ENST00000583311 TMEM57Q8N5G2 664 aa30.74■■■□□ 2.51
MIR3960-201ENST00000583311 CHMP3Q9Y3E7 222 aa30.74■■■□□ 2.51
MIR3960-201ENST00000583311 LMBR1LQ6UX01 489 aa30.73■■■□□ 2.51
MIR3960-201ENST00000583311 LTBP3Q9NS15 1303 aa30.73■■■□□ 2.51
MIR3960-201ENST00000583311 ANKRD18BA2A2Z9 1011 aa30.72■■■□□ 2.51
MIR3960-201ENST00000583311 ITGA6P23229 1130 aa30.72■■■□□ 2.51
MIR3960-201ENST00000583311 FAM161AQ3B820 660 aa30.72■■■□□ 2.51
MIR3960-201ENST00000583311 TAOK3Q9H2K8 898 aa30.72■■■□□ 2.51
MIR3960-201ENST00000583311 CHD4Q14839 1912 aa30.71■■■□□ 2.51
MIR3960-201ENST00000583311 UTRNP46939 3433 aa30.71■■■□□ 2.51
MIR3960-201ENST00000583311 IFIT5Q13325 482 aaKnown RBP30.71■■■□□ 2.51
MIR3960-201ENST00000583311 EPHA10Q5JZY3 1008 aa30.71■■■□□ 2.51
MIR3960-201ENST00000583311 FER1L6Q2WGJ9 1857 aa30.7■■■□□ 2.51
MIR3960-201ENST00000583311 NFKBIEO00221 500 aa30.7■■■□□ 2.51
MIR3960-201ENST00000583311 IGHMBP2P38935 993 aaKnown RBP30.7■■■□□ 2.51
MIR3960-201ENST00000583311 CCDC57Q2TAC2 916 aa30.7■■■□□ 2.51
MIR3960-201ENST00000583311 ITPRIPQ8IWB1 547 aa30.7■■■□□ 2.51
MIR3960-201ENST00000583311 BICC1Q9H694 974 aaKnown RBP30.7■■■□□ 2.51
MIR3960-201ENST00000583311 TAF1P21675 1872 aa30.7■■■□□ 2.5
MIR3960-201ENST00000583311 FKBP4Q02790 459 aaKnown RBP eCLIP30.69■■■□□ 2.5
MIR3960-201ENST00000583311 RABL6Q3YEC7 729 aaPredicted RBP30.69■■■□□ 2.5
MIR3960-201ENST00000583311 OLFM4Q6UX06 510 aa30.69■■■□□ 2.5
MIR3960-201ENST00000583311 KAZALD1Q96I82 304 aa30.69■■■□□ 2.5
MIR3960-201ENST00000583311 MEIS3Q99687 375 aa30.69■■■□□ 2.5
MIR3960-201ENST00000583311 RASSF7Q02833 373 aa30.68■■■□□ 2.5
MIR3960-201ENST00000583311 PSMD1Q99460 953 aa30.68■■■□□ 2.5
MIR3960-201ENST00000583311 RLBP1P12271 317 aa30.67■■■□□ 2.5
MIR3960-201ENST00000583311 LMNB1P20700 586 aa30.67■■■□□ 2.5
MIR3960-201ENST00000583311 MPHOSPH8Q99549 860 aa30.67■■■□□ 2.5
MIR3960-201ENST00000583311 TAF7LQ5H9L4 462 aa30.66■■■□□ 2.5
MIR3960-201ENST00000583311 SUPT20HQ8NEM7 779 aa30.66■■■□□ 2.5
MIR3960-201ENST00000583311 BSDC1Q9NW68 430 aaPredicted RBP30.66■■■□□ 2.5
MIR3960-201ENST00000583311 SNED1Q8TER0 1413 aa30.65■■■□□ 2.5
MIR3960-201ENST00000583311 LRRC37AA6NMS7 1700 aa30.65■■■□□ 2.5
MIR3960-201ENST00000583311 PLIN1O60240 522 aa30.65■■■□□ 2.5
MIR3960-201ENST00000583311 DPP8Q6V1X1 898 aaPredicted RBP30.65■■■□□ 2.5
MIR3960-201ENST00000583311 MPNDQ8N594 471 aa30.65■■■□□ 2.5
MIR3960-201ENST00000583311 ANKRD44Q8N8A2 993 aa30.65■■■□□ 2.5
MIR3960-201ENST00000583311 PANK1Q8TE04 598 aa30.65■■■□□ 2.5
MIR3960-201ENST00000583311 PDE3AQ14432 1141 aa30.64■■■□□ 2.5
MIR3960-201ENST00000583311 LRRFIP2Q9Y608 721 aaKnown RBP30.64■■■□□ 2.5
MIR3960-201ENST00000583311 C9orf131Q5VYM1 1079 aa30.63■■■□□ 2.49
MIR3960-201ENST00000583311 RNF181Q9P0P0 153 aa30.63■■■□□ 2.49
MIR3960-201ENST00000583311 COL4A1P02462 1669 aa30.62■■■□□ 2.49
MIR3960-201ENST00000583311 GNAI2P04899 355 aa30.62■■■□□ 2.49
MIR3960-201ENST00000583311 CHMP4BQ9H444 224 aaKnown RBP30.61■■■□□ 2.49
MIR3960-201ENST00000583311 NSFL1CQ9UNZ2 370 aaKnown RBP30.61■■■□□ 2.49
MIR3960-201ENST00000583311 YY1P25490 414 aa30.6■■■□□ 2.49
MIR3960-201ENST00000583311 MVPQ14764 893 aaKnown RBP30.6■■■□□ 2.49
MIR3960-201ENST00000583311 RTFDC1Q9BY42 306 aaPredicted RBP30.6■■■□□ 2.49
MIR3960-201ENST00000583311 VPS33BQ9H267 617 aa30.6■■■□□ 2.49
MIR3960-201ENST00000583311 ANKIB1Q9P2G1 1089 aa30.6■■■□□ 2.49
MIR3960-201ENST00000583311 SBF1O95248 1867 aa30.59■■■□□ 2.49
MIR3960-201ENST00000583311 PODXL2Q9NZ53 605 aa30.59■■■□□ 2.49
MIR3960-201ENST00000583311 DDX19BQ9UMR2 479 aa30.59■■■□□ 2.49
MIR3960-201ENST00000583311 ZC3H4Q9UPT8 1303 aaKnown RBP30.58■■■□□ 2.49
MIR3960-201ENST00000583311 ZBTB7BO15156 539 aaPredicted RBP30.58■■■□□ 2.49
MIR3960-201ENST00000583311 IARSP41252 1262 aaKnown RBP30.58■■■□□ 2.49
MIR3960-201ENST00000583311 GPSM2P81274 684 aa30.58■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms