RNA–Protein interactions for RNA: ENST00000583211.5

LIMD2-211, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 1,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-211ENST00000583211 BCAR3O75815 825 aa23.04■■□□□ 1.28
LIMD2-211ENST00000583211 CCDC152Q4G0S7 254 aa23.04■■□□□ 1.28
LIMD2-211ENST00000583211 BBOX1O75936 387 aa23.03■■□□□ 1.28
LIMD2-211ENST00000583211 CC2D2BQ6DHV5 1058 aa23.03■■□□□ 1.28
LIMD2-211ENST00000583211 C9orf78Q9NZ63 289 aaPredicted RBP23.03■■□□□ 1.28
LIMD2-211ENST00000583211 PPEF1O14829 653 aaPredicted RBP23.02■■□□□ 1.28
LIMD2-211ENST00000583211 CCT4P50991 539 aaKnown RBP23.02■■□□□ 1.28
LIMD2-211ENST00000583211 CTSWP56202 376 aa23.02■■□□□ 1.28
LIMD2-211ENST00000583211 GRAPQ13588 217 aa23.02■■□□□ 1.28
LIMD2-211ENST00000583211 GRIPAP1Q4V328 841 aa23.02■■□□□ 1.28
LIMD2-211ENST00000583211 CCDC93Q567U6 631 aa23.02■■□□□ 1.28
LIMD2-211ENST00000583211 TMC4Q7Z404 712 aa23.02■■□□□ 1.28
LIMD2-211ENST00000583211 GRAPLQ8TC17 118 aaPredicted RBP23.02■■□□□ 1.28
LIMD2-211ENST00000583211 ZNF219Q9P2Y4 722 aaPredicted RBP23.02■■□□□ 1.28
LIMD2-211ENST00000583211 SPEF2Q9C093 1822 aa23.02■■□□□ 1.28
LIMD2-211ENST00000583211 UTYO14607 1347 aa23.01■■□□□ 1.27
LIMD2-211ENST00000583211 LTBP3Q9NS15 1303 aa23.01■■□□□ 1.27
LIMD2-211ENST00000583211 RTL9Q8NET4 1388 aa23.01■■□□□ 1.27
LIMD2-211ENST00000583211 ATF7IPQ6VMQ6 1270 aa23■■□□□ 1.27
LIMD2-211ENST00000583211 RTKN2Q8IZC4 609 aa23■■□□□ 1.27
LIMD2-211ENST00000583211 TTLL11Q8NHH1 800 aa23■■□□□ 1.27
LIMD2-211ENST00000583211 SNED1Q8TER0 1413 aa22.99■■□□□ 1.27
LIMD2-211ENST00000583211 TRIM27P14373 513 aa22.99■■□□□ 1.27
LIMD2-211ENST00000583211 ZKSCAN2Q63HK3 967 aa22.99■■□□□ 1.27
LIMD2-211ENST00000583211 FRAT1Q92837 279 aaPredicted RBP22.99■■□□□ 1.27
LIMD2-211ENST00000583211 YTHDC1Q96MU7 727 aaKnown RBP22.99■■□□□ 1.27
LIMD2-211ENST00000583211 TMX4Q9H1E5 349 aaPredicted RBP22.99■■□□□ 1.27
LIMD2-211ENST00000583211 TAOK3Q9H2K8 898 aa22.99■■□□□ 1.27
LIMD2-211ENST00000583211 ATP6V0A2Q9Y487 856 aa22.99■■□□□ 1.27
LIMD2-211ENST00000583211 COL4A1P02462 1669 aa22.99■■□□□ 1.27
LIMD2-211ENST00000583211 TIAM2Q8IVF5 1701 aa22.99■■□□□ 1.27
LIMD2-211ENST00000583211 NFKBIEO00221 500 aa22.98■■□□□ 1.27
LIMD2-211ENST00000583211 YY1P25490 414 aa22.97■■□□□ 1.27
LIMD2-211ENST00000583211 SP8Q8IXZ3 490 aa22.97■■□□□ 1.27
LIMD2-211ENST00000583211 CELF1Q92879 486 aaKnown RBP22.97■■□□□ 1.27
LIMD2-211ENST00000583211 CSF1RP07333 972 aa22.96■■□□□ 1.27
LIMD2-211ENST00000583211 NBPF7P0C2Y1 421 aaPredicted RBP22.96■■□□□ 1.27
LIMD2-211ENST00000583211 LMNB1P20700 586 aa22.96■■□□□ 1.27
LIMD2-211ENST00000583211 RPS8P62241 208 aaKnown RBP22.96■■□□□ 1.27
LIMD2-211ENST00000583211 RASSF7Q02833 373 aa22.96■■□□□ 1.27
LIMD2-211ENST00000583211 INTS3Q68E01 1043 aaKnown RBP22.96■■□□□ 1.27
LIMD2-211ENST00000583211 OLFM4Q6UX06 510 aa22.96■■□□□ 1.27
LIMD2-211ENST00000583211 FOXO4P98177 505 aa22.95■■□□□ 1.26
LIMD2-211ENST00000583211 LTBP1Q14766 1721 aa22.95■■□□□ 1.26
LIMD2-211ENST00000583211 CDC5LQ99459 802 aaKnown RBP22.95■■□□□ 1.26
LIMD2-211ENST00000583211 PSMD1Q99460 953 aa22.95■■□□□ 1.26
LIMD2-211ENST00000583211 USP44Q9H0E7 712 aa22.95■■□□□ 1.26
LIMD2-211ENST00000583211 GREM2Q9H772 168 aa22.95■■□□□ 1.26
LIMD2-211ENST00000583211 SEC31BQ9NQW1 1179 aa22.95■■□□□ 1.26
LIMD2-211ENST00000583211 FKBP4Q02790 459 aaKnown RBP eCLIP22.94■■□□□ 1.26
LIMD2-211ENST00000583211 CCDC85AQ96PX6 553 aaPredicted RBP22.94■■□□□ 1.26
LIMD2-211ENST00000583211 RCAN3Q9UKA8 241 aa22.94■■□□□ 1.26
LIMD2-211ENST00000583211 C9orf131Q5VYM1 1079 aa22.93■■□□□ 1.26
LIMD2-211ENST00000583211 ANKRD18AQ8IVF6 992 aa22.92■■□□□ 1.26
LIMD2-211ENST00000583211 ZC3H4Q9UPT8 1303 aaKnown RBP22.91■■□□□ 1.26
LIMD2-211ENST00000583211 ITGA6P23229 1130 aa22.91■■□□□ 1.26
LIMD2-211ENST00000583211 PRELPP51888 382 aa22.91■■□□□ 1.26
LIMD2-211ENST00000583211 FAM161AQ3B820 660 aa22.91■■□□□ 1.26
LIMD2-211ENST00000583211 KAZALD1Q96I82 304 aa22.91■■□□□ 1.26
LIMD2-211ENST00000583211 SUCLG2Q96I99 432 aa22.91■■□□□ 1.26
LIMD2-211ENST00000583211 RNF181Q9P0P0 153 aa22.91■■□□□ 1.26
LIMD2-211ENST00000583211 HDAC5Q9UQL6 1122 aa22.91■■□□□ 1.26
LIMD2-211ENST00000583211 EPHA10Q5JZY3 1008 aa22.9■■□□□ 1.26
LIMD2-211ENST00000583211 LMBR1LQ6UX01 489 aa22.9■■□□□ 1.26
LIMD2-211ENST00000583211 CLUAP1Q96AJ1 413 aa22.9■■□□□ 1.26
LIMD2-211ENST00000583211 A0A1B0GUL6 1792 aa22.9■■□□□ 1.26
LIMD2-211ENST00000583211 DUOX1Q9NRD9 1551 aa22.89■■□□□ 1.26
LIMD2-211ENST00000583211 ANKRD18BA2A2Z9 1011 aa22.89■■□□□ 1.25
LIMD2-211ENST00000583211 IFIT5Q13325 482 aaKnown RBP22.89■■□□□ 1.25
LIMD2-211ENST00000583211 RABL6Q3YEC7 729 aaPredicted RBP22.89■■□□□ 1.25
LIMD2-211ENST00000583211 FTSJ3Q8IY81 847 aaKnown RBP22.89■■□□□ 1.25
LIMD2-211ENST00000583211 TNNQ9UQP3 1299 aa22.89■■□□□ 1.25
LIMD2-211ENST00000583211 UBTFL1P0CB47 393 aaPredicted RBP22.88■■□□□ 1.25
LIMD2-211ENST00000583211 IGHMBP2P38935 993 aaKnown RBP22.88■■□□□ 1.25
LIMD2-211ENST00000583211 DPP8Q6V1X1 898 aaPredicted RBP22.88■■□□□ 1.25
LIMD2-211ENST00000583211 SLC51AQ86UW1 340 aa22.88■■□□□ 1.25
LIMD2-211ENST00000583211 DZIP1LQ8IYY4 767 aaKnown RBP22.88■■□□□ 1.25
LIMD2-211ENST00000583211 MPNDQ8N594 471 aa22.88■■□□□ 1.25
LIMD2-211ENST00000583211 SUPT20HQ8NEM7 779 aa22.88■■□□□ 1.25
LIMD2-211ENST00000583211 RTFDC1Q9BY42 306 aaPredicted RBP22.88■■□□□ 1.25
LIMD2-211ENST00000583211 BICC1Q9H694 974 aaKnown RBP22.88■■□□□ 1.25
LIMD2-211ENST00000583211 BSDC1Q9NW68 430 aaPredicted RBP22.88■■□□□ 1.25
LIMD2-211ENST00000583211 CHMP3Q9Y3E7 222 aa22.88■■□□□ 1.25
LIMD2-211ENST00000583211 MS4A1P11836 297 aa22.87■■□□□ 1.25
LIMD2-211ENST00000583211 CCDC57Q2TAC2 916 aa22.87■■□□□ 1.25
LIMD2-211ENST00000583211 VPS33BQ9H267 617 aa22.87■■□□□ 1.25
LIMD2-211ENST00000583211 GNAI3P08754 354 aa22.86■■□□□ 1.25
LIMD2-211ENST00000583211 IARSP41252 1262 aaKnown RBP22.86■■□□□ 1.25
LIMD2-211ENST00000583211 TMEM57Q8N5G2 664 aa22.86■■□□□ 1.25
LIMD2-211ENST00000583211 ZNF277Q9NRM2 450 aaPredicted RBP22.86■■□□□ 1.25
LIMD2-211ENST00000583211 ANKRD44Q8N8A2 993 aa22.85■■□□□ 1.25
LIMD2-211ENST00000583211 MPHOSPH8Q99549 860 aa22.85■■□□□ 1.25
LIMD2-211ENST00000583211 MEIS3Q99687 375 aa22.85■■□□□ 1.25
LIMD2-211ENST00000583211 PODXL2Q9NZ53 605 aa22.85■■□□□ 1.25
LIMD2-211ENST00000583211 NSFL1CQ9UNZ2 370 aaKnown RBP22.85■■□□□ 1.25
LIMD2-211ENST00000583211 GPSM2P81274 684 aa22.83■■□□□ 1.25
LIMD2-211ENST00000583211 XDHP47989 1333 aa22.82■■□□□ 1.24
LIMD2-211ENST00000583211 RLBP1P12271 317 aa22.82■■□□□ 1.24
LIMD2-211ENST00000583211 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.82■■□□□ 1.24
LIMD2-211ENST00000583211 ZNF784Q8NCA9 323 aaPredicted RBP22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms